RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 FUT4P22083 530 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 CES1P23141 567 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 FOXA1P55317 472 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 DNAJB13P59910 316 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 ECT2LQ008S8 904 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 GEN1Q17RS7 908 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 C18orf21Q32NC0 220 aaPredicted RBP13.48□□□□□ -0.25
VMP1-201ENST00000262291 LY6G5CQ5SRR4 150 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 Q6ZVU0 165 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 SCUBE1Q8IWY4 988 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 TRPC4APQ8TEL6 797 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 PEX13Q92968 403 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 NMD3Q96D46 503 aaKnown RBP13.48□□□□□ -0.25
VMP1-201ENST00000262291 LINGO1Q96FE5 620 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 SLC45A3Q96JT2 553 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 CNDP1Q96KN2 507 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 APOL5Q9BWW9 433 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 INTS10Q9NVR2 710 aaKnown RBP13.48□□□□□ -0.25
VMP1-201ENST00000262291 PDP2Q9P2J9 529 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 CDH22Q9UJ99 828 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 ZNF510Q9Y2H8 683 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 SLC30A1Q9Y6M5 507 aa13.48□□□□□ -0.25
VMP1-201ENST00000262291 NPIPB15A6NHN6 443 aaPredicted RBP13.47□□□□□ -0.25
VMP1-201ENST00000262291 E5RI56 91 aa13.47□□□□□ -0.25
VMP1-201ENST00000262291 MAP3K7O43318 606 aa13.47□□□□□ -0.25
VMP1-201ENST00000262291 ECI2O75521 394 aa13.47□□□□□ -0.25
VMP1-201ENST00000262291 UGT2B4P06133 528 aa13.47□□□□□ -0.25
VMP1-201ENST00000262291 NME5P56597 212 aa13.47□□□□□ -0.25
VMP1-201ENST00000262291 SLC34A1Q06495 639 aa13.47□□□□□ -0.25
VMP1-201ENST00000262291 DEFB107AQ8IZN7 70 aa13.47□□□□□ -0.25
VMP1-201ENST00000262291 PPFIBP2Q8ND30 876 aa13.47□□□□□ -0.25
VMP1-201ENST00000262291 LKAAEAR1Q8TD35 194 aa13.47□□□□□ -0.25
VMP1-201ENST00000262291 FAM192AQ9GZU8 254 aa13.47□□□□□ -0.25
VMP1-201ENST00000262291 ZFYVE1Q9HBF4 777 aa13.47□□□□□ -0.25
VMP1-201ENST00000262291 FBRSL1Q9HCM7 1045 aaKnown RBP13.47□□□□□ -0.25
VMP1-201ENST00000262291 SEMA4BQ9NPR2 832 aaPredicted RBP13.47□□□□□ -0.25
VMP1-201ENST00000262291 SLC7A8Q9UHI5 535 aa13.47□□□□□ -0.25
VMP1-201ENST00000262291 PRSS21Q9Y6M0 314 aa13.47□□□□□ -0.25
VMP1-201ENST00000262291 IMPDH1P20839 514 aa13.47□□□□□ -0.25
VMP1-201ENST00000262291 MSX2P35548 267 aaPredicted RBP13.47□□□□□ -0.25
VMP1-201ENST00000262291 AP1S1P61966 158 aa13.47□□□□□ -0.25
VMP1-201ENST00000262291 SH3BP2P78314 561 aa13.47□□□□□ -0.25
VMP1-201ENST00000262291 RAD51Q06609 339 aa13.47□□□□□ -0.25
VMP1-201ENST00000262291 ISLR2Q6UXK2 745 aa13.47□□□□□ -0.25
VMP1-201ENST00000262291 CPXM2Q8N436 756 aa13.47□□□□□ -0.25
VMP1-201ENST00000262291 ATOH8Q96SQ7 321 aa13.47□□□□□ -0.25
VMP1-201ENST00000262291 ZNF184Q99676 751 aaPredicted RBP13.47□□□□□ -0.25
VMP1-201ENST00000262291 ASB8Q9H765 288 aa13.47□□□□□ -0.25
VMP1-201ENST00000262291 TDP1Q9NUW8 608 aa13.47□□□□□ -0.25
VMP1-201ENST00000262291 CD84Q9UIB8 345 aa13.47□□□□□ -0.25
VMP1-201ENST00000262291 TRMT6Q9UJA5 497 aaKnown RBP13.47□□□□□ -0.25
VMP1-201ENST00000262291 ARHGAP26Q9UNA1 814 aa13.47□□□□□ -0.25
VMP1-201ENST00000262291 ASB1Q9Y576 335 aa13.47□□□□□ -0.25
VMP1-201ENST00000262291 GAPDHSO14556 408 aaPredicted RBP13.46□□□□□ -0.25
VMP1-201ENST00000262291 PSMG1O95456 288 aa13.46□□□□□ -0.25
VMP1-201ENST00000262291 IGSF6O95976 241 aa13.46□□□□□ -0.25
VMP1-201ENST00000262291 TYRP14679 529 aa13.46□□□□□ -0.25
VMP1-201ENST00000262291 CEBPBP17676 345 aa13.46□□□□□ -0.25
VMP1-201ENST00000262291 PTPN2P17706 415 aa13.46□□□□□ -0.25
VMP1-201ENST00000262291 ITGAXP20702 1163 aa13.46□□□□□ -0.25
VMP1-201ENST00000262291 EEF1DP29692 281 aaKnown RBP13.46□□□□□ -0.25
VMP1-201ENST00000262291 LIN52Q52LA3 116 aa13.46□□□□□ -0.25
VMP1-201ENST00000262291 SCIMPQ6UWF3 145 aa13.46□□□□□ -0.25
VMP1-201ENST00000262291 DPY19L3Q6ZPD9 716 aa13.46□□□□□ -0.25
VMP1-201ENST00000262291 RIPOR1Q6ZS17 1223 aa13.46□□□□□ -0.25
VMP1-201ENST00000262291 SERPINA9Q86WD7 417 aa13.46□□□□□ -0.25
VMP1-201ENST00000262291 STMN2Q93045 179 aa13.46□□□□□ -0.25
VMP1-201ENST00000262291 C3orf30Q96M34 536 aa13.46□□□□□ -0.25
VMP1-201ENST00000262291 PANX3Q96QZ0 392 aa13.46□□□□□ -0.25
VMP1-201ENST00000262291 MID1IP1Q9NPA3 183 aa13.46□□□□□ -0.25
VMP1-201ENST00000262291 IL26Q9NPH9 171 aa13.46□□□□□ -0.25
VMP1-201ENST00000262291 RIMKLBQ9ULI2 386 aa13.46□□□□□ -0.25
VMP1-201ENST00000262291 BTRCQ9Y297 605 aa13.46□□□□□ -0.25
VMP1-201ENST00000262291 TRAF6Q9Y4K3 522 aa13.46□□□□□ -0.25
VMP1-201ENST00000262291 COPG1Q9Y678 874 aaKnown RBP13.46□□□□□ -0.25
VMP1-201ENST00000262291 A0A088AWK7 358 aa13.46□□□□□ -0.26
VMP1-201ENST00000262291 A0A0J9YYE9 177 aa13.46□□□□□ -0.26
VMP1-201ENST00000262291 PDLIM1O00151 329 aa13.46□□□□□ -0.26
VMP1-201ENST00000262291 OR6B1O95007 311 aa13.46□□□□□ -0.26
VMP1-201ENST00000262291 TRIM16O95361 564 aa13.46□□□□□ -0.26
VMP1-201ENST00000262291 TRBC1P01850 177 aa13.46□□□□□ -0.26
VMP1-201ENST00000262291 BPIP17213 487 aa13.46□□□□□ -0.26
VMP1-201ENST00000262291 TTPAP49638 278 aa13.46□□□□□ -0.26
VMP1-201ENST00000262291 NUDT2P50583 147 aa13.46□□□□□ -0.26
VMP1-201ENST00000262291 SUOXP51687 545 aa13.46□□□□□ -0.26
VMP1-201ENST00000262291 ATXN3P54252 364 aaPredicted RBP13.46□□□□□ -0.26
VMP1-201ENST00000262291 CHRNA6Q15825 494 aa13.46□□□□□ -0.26
VMP1-201ENST00000262291 TCHHL1Q5QJ38 904 aaPredicted RBP13.46□□□□□ -0.26
VMP1-201ENST00000262291 IZUMO2Q6UXV1 221 aa13.46□□□□□ -0.26
VMP1-201ENST00000262291 RNF148Q8N7C7 305 aa13.46□□□□□ -0.26
VMP1-201ENST00000262291 OR2AP1Q8NGE2 309 aa13.46□□□□□ -0.26
VMP1-201ENST00000262291 CFAP61Q8NHU2 1237 aa13.46□□□□□ -0.26
VMP1-201ENST00000262291 ITFG1Q8TB96 612 aa13.46□□□□□ -0.26
VMP1-201ENST00000262291 CD200R1Q8TD46 325 aa13.46□□□□□ -0.26
VMP1-201ENST00000262291 ACDQ96AP0 544 aa13.46□□□□□ -0.26
VMP1-201ENST00000262291 LRRC3BQ96PB8 259 aa13.46□□□□□ -0.26
VMP1-201ENST00000262291 ATP13A3Q9H7F0 1226 aa13.46□□□□□ -0.26
VMP1-201ENST00000262291 C9JVG2 144 aa13.45□□□□□ -0.26
VMP1-201ENST00000262291 CFLARO15519 480 aa13.45□□□□□ -0.26
VMP1-201ENST00000262291 VPS26AO75436 327 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms