RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 SLC8A2Q9UPR5 921 aa16.23■□□□□ 0.19
TM9SF1-201ENST00000261789 PHF24Q9UPV7 400 aa16.23■□□□□ 0.19
TM9SF1-201ENST00000261789 LCHNA4D1U4 455 aa16.23■□□□□ 0.19
TM9SF1-201ENST00000261789 EPOP01588 193 aa16.23■□□□□ 0.19
TM9SF1-201ENST00000261789 IGLV3-27P01718 113 aa16.23■□□□□ 0.19
TM9SF1-201ENST00000261789 RPS17P08708 135 aaKnown RBP16.23■□□□□ 0.19
TM9SF1-201ENST00000261789 RANBP1P43487 201 aa16.23■□□□□ 0.19
TM9SF1-201ENST00000261789 YBEYP58557 167 aaPredicted RBP16.23■□□□□ 0.19
TM9SF1-201ENST00000261789 CRHR2Q13324 411 aa16.23■□□□□ 0.19
TM9SF1-201ENST00000261789 RCAN2Q14206 197 aa16.23■□□□□ 0.19
TM9SF1-201ENST00000261789 C18orf21Q32NC0 220 aaPredicted RBP16.23■□□□□ 0.19
TM9SF1-201ENST00000261789 PYCR3Q53H96 274 aa16.23■□□□□ 0.19
TM9SF1-201ENST00000261789 RNF19BQ6ZMZ0 732 aa16.23■□□□□ 0.19
TM9SF1-201ENST00000261789 RALGPS2Q86X27 583 aaPredicted RBP16.23■□□□□ 0.19
TM9SF1-201ENST00000261789 EFHBQ8N7U6 833 aa16.23■□□□□ 0.19
TM9SF1-201ENST00000261789 GAB3Q8WWW8 586 aa16.23■□□□□ 0.19
TM9SF1-201ENST00000261789 ZNF599Q96NL3 588 aa16.23■□□□□ 0.19
TM9SF1-201ENST00000261789 TRIM15Q9C019 465 aa16.23■□□□□ 0.19
TM9SF1-201ENST00000261789 POPDC3Q9HBV1 291 aa16.23■□□□□ 0.19
TM9SF1-201ENST00000261789 FKBPLQ9UIM3 349 aa16.23■□□□□ 0.19
TM9SF1-201ENST00000261789 PCTPQ9UKL6 214 aa16.23■□□□□ 0.19
TM9SF1-201ENST00000261789 ZFP37Q9Y6Q3 630 aaPredicted RBP16.23■□□□□ 0.19
TM9SF1-201ENST00000261789 OR4F21O95013 312 aa16.22■□□□□ 0.19
TM9SF1-201ENST00000261789 C1RP00736 705 aa16.22■□□□□ 0.19
TM9SF1-201ENST00000261789 PRLP01236 227 aa16.22■□□□□ 0.19
TM9SF1-201ENST00000261789 CCND3P30281 292 aaPredicted RBP16.22■□□□□ 0.19
TM9SF1-201ENST00000261789 CDK9P50750 372 aaKnown RBP16.22■□□□□ 0.19
TM9SF1-201ENST00000261789 BNIP2Q12982 314 aa16.22■□□□□ 0.19
TM9SF1-201ENST00000261789 DUSP4Q13115 394 aa16.22■□□□□ 0.19
TM9SF1-201ENST00000261789 INTS11Q5TA45 600 aaKnown RBP16.22■□□□□ 0.19
TM9SF1-201ENST00000261789 CHST15Q7LFX5 561 aaPredicted RBP16.22■□□□□ 0.19
TM9SF1-201ENST00000261789 CPNE9Q8IYJ1 553 aa16.22■□□□□ 0.19
TM9SF1-201ENST00000261789 TRPV3Q8NET8 790 aa16.22■□□□□ 0.19
TM9SF1-201ENST00000261789 LPCAT1Q8NF37 534 aa16.22■□□□□ 0.19
TM9SF1-201ENST00000261789 MAGEE2Q8TD90 523 aaPredicted RBP16.22■□□□□ 0.19
TM9SF1-201ENST00000261789 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.22■□□□□ 0.19
TM9SF1-201ENST00000261789 CENPNQ96H22 339 aaPredicted RBP16.22■□□□□ 0.19
TM9SF1-201ENST00000261789 AIG1Q9NVV5 245 aa16.22■□□□□ 0.19
TM9SF1-201ENST00000261789 IL37Q9NZH6 218 aa16.22■□□□□ 0.19
TM9SF1-201ENST00000261789 MKI67P46013 3256 aaKnown RBP16.22■□□□□ 0.19
TM9SF1-201ENST00000261789 CCDC154A6NI56 674 aa16.22■□□□□ 0.19
TM9SF1-201ENST00000261789 NT5C1B-RDH14C9J2C7 533 aa16.22■□□□□ 0.19
TM9SF1-201ENST00000261789 F5H5T6 163 aa16.22■□□□□ 0.19
TM9SF1-201ENST00000261789 SLC22A3O75751 556 aa16.22■□□□□ 0.19
TM9SF1-201ENST00000261789 VNN2O95498 520 aa16.22■□□□□ 0.19
TM9SF1-201ENST00000261789 TSPAN12O95859 305 aa16.22■□□□□ 0.19
TM9SF1-201ENST00000261789 YAP1P46937 504 aaKnown RBP16.22■□□□□ 0.19
TM9SF1-201ENST00000261789 STT3AP46977 705 aa16.22■□□□□ 0.19
TM9SF1-201ENST00000261789 SGSHP51688 502 aa16.22■□□□□ 0.19
TM9SF1-201ENST00000261789 GNA12Q03113 381 aa16.22■□□□□ 0.19
TM9SF1-201ENST00000261789 MBTPS1Q14703 1052 aa16.22■□□□□ 0.19
TM9SF1-201ENST00000261789 SLC2A7Q6PXP3 512 aa16.22■□□□□ 0.19
TM9SF1-201ENST00000261789 RASAL3Q86YV0 1011 aa16.22■□□□□ 0.19
TM9SF1-201ENST00000261789 CLVS1Q8IUQ0 354 aaPredicted RBP16.22■□□□□ 0.19
TM9SF1-201ENST00000261789 MFSD2AQ8NA29 543 aa16.22■□□□□ 0.19
TM9SF1-201ENST00000261789 FAM81AQ8TBF8 368 aa16.22■□□□□ 0.19
TM9SF1-201ENST00000261789 CINPQ9BW66 212 aaPredicted RBP16.22■□□□□ 0.19
TM9SF1-201ENST00000261789 NMRK2Q9NPI5 230 aa16.22■□□□□ 0.19
TM9SF1-201ENST00000261789 INTS10Q9NVR2 710 aaKnown RBP16.22■□□□□ 0.19
TM9SF1-201ENST00000261789 THEGQ9P2T0 379 aa16.22■□□□□ 0.19
TM9SF1-201ENST00000261789 CDC14AQ9UNH5 594 aa16.22■□□□□ 0.19
TM9SF1-201ENST00000261789 TCRBV5S2A0A599 114 aa16.21■□□□□ 0.19
TM9SF1-201ENST00000261789 FAM92AA1XBS5 289 aa16.21■□□□□ 0.19
TM9SF1-201ENST00000261789 FOXD2O60548 495 aaPredicted RBP16.21■□□□□ 0.19
TM9SF1-201ENST00000261789 PRR35P0CG20 571 aa16.21■□□□□ 0.19
TM9SF1-201ENST00000261789 MAPKAPK2P49137 400 aa16.21■□□□□ 0.19
TM9SF1-201ENST00000261789 GATMP50440 423 aa16.21■□□□□ 0.19
TM9SF1-201ENST00000261789 PLCL1Q15111 1095 aa16.21■□□□□ 0.19
TM9SF1-201ENST00000261789 ATP6AP1Q15904 470 aa16.21■□□□□ 0.19
TM9SF1-201ENST00000261789 SLC36A3Q495N2 470 aa16.21■□□□□ 0.19
TM9SF1-201ENST00000261789 NANOGP8Q6NSW7 305 aa16.21■□□□□ 0.19
TM9SF1-201ENST00000261789 TBPL2Q6SJ96 375 aa16.21■□□□□ 0.19
TM9SF1-201ENST00000261789 IFNL1Q8IU54 200 aa16.21■□□□□ 0.19
TM9SF1-201ENST00000261789 FNDC5Q8NAU1 212 aa16.21■□□□□ 0.19
TM9SF1-201ENST00000261789 PEX13Q92968 403 aa16.21■□□□□ 0.19
TM9SF1-201ENST00000261789 CCDC97Q96F63 343 aaPredicted RBP16.21■□□□□ 0.19
TM9SF1-201ENST00000261789 LINGO1Q96FE5 620 aa16.21■□□□□ 0.19
TM9SF1-201ENST00000261789 FAM193BQ96PV7 902 aaPredicted RBP16.21■□□□□ 0.19
TM9SF1-201ENST00000261789 MGME1Q9BQP7 344 aa16.21■□□□□ 0.19
TM9SF1-201ENST00000261789 RPF2Q9H7B2 306 aaKnown RBP16.21■□□□□ 0.19
TM9SF1-201ENST00000261789 NANOGQ9H9S0 305 aa16.21■□□□□ 0.19
TM9SF1-201ENST00000261789 EVLQ9UI08 416 aaPredicted RBP16.21■□□□□ 0.19
TM9SF1-201ENST00000261789 TMCO1Q9UM00 188 aa16.21■□□□□ 0.19
TM9SF1-201ENST00000261789 SCAMP3O14828 347 aaKnown RBP16.21■□□□□ 0.18
TM9SF1-201ENST00000261789 SNX2O60749 519 aa16.21■□□□□ 0.18
TM9SF1-201ENST00000261789 ESRRBO95718 433 aa16.21■□□□□ 0.18
TM9SF1-201ENST00000261789 SNAP29O95721 258 aa16.21■□□□□ 0.18
TM9SF1-201ENST00000261789 PYGLP06737 847 aa16.21■□□□□ 0.18
TM9SF1-201ENST00000261789 MYF6P23409 242 aa16.21■□□□□ 0.18
TM9SF1-201ENST00000261789 POLR2JP52435 117 aaKnown RBP16.21■□□□□ 0.18
TM9SF1-201ENST00000261789 TRIM71Q2Q1W2 868 aaKnown RBP16.21■□□□□ 0.18
TM9SF1-201ENST00000261789 CTSL3PQ5NE16 218 aa16.21■□□□□ 0.18
TM9SF1-201ENST00000261789 HM13Q8TCT9 377 aa16.21■□□□□ 0.18
TM9SF1-201ENST00000261789 PLEKHG4BQ96PX9 1271 aa16.21■□□□□ 0.18
TM9SF1-201ENST00000261789 DCUN1D5Q9BTE7 237 aa16.21■□□□□ 0.18
TM9SF1-201ENST00000261789 TRIM54Q9BYV2 358 aa16.21■□□□□ 0.18
TM9SF1-201ENST00000261789 CD274Q9NZQ7 290 aa16.21■□□□□ 0.18
TM9SF1-201ENST00000261789 HACD3Q9P035 362 aa16.21■□□□□ 0.18
TM9SF1-201ENST00000261789 GBF1Q92538 1859 aa16.21■□□□□ 0.18
TM9SF1-201ENST00000261789 ANKRD36A6QL64 1941 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms