RNA–Protein interactions for RNA: ENST00000254644.12

MRPL35-201, Transcript of mitochondrial ribosomal protein L35, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene MRPL35, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL35-201ENST00000254644 NFKB2Q00653 900 aa12.86□□□□□ -0.35
MRPL35-201ENST00000254644 NFATC2Q13469 925 aa12.86□□□□□ -0.35
MRPL35-201ENST00000254644 MESDQ14696 234 aa12.86□□□□□ -0.35
MRPL35-201ENST00000254644 TCEAL1Q15170 157 aa12.86□□□□□ -0.35
MRPL35-201ENST00000254644 ZNF648Q5T619 568 aaPredicted RBP12.86□□□□□ -0.35
MRPL35-201ENST00000254644 LRRC38Q5VT99 294 aa12.86□□□□□ -0.35
MRPL35-201ENST00000254644 BORAQ6PGQ7 559 aa12.86□□□□□ -0.35
MRPL35-201ENST00000254644 CEACAM20Q6UY09 585 aa12.86□□□□□ -0.35
MRPL35-201ENST00000254644 PRICKLE2Q7Z3G6 844 aa12.86□□□□□ -0.35
MRPL35-201ENST00000254644 NT5DC3Q86UY8 548 aa12.86□□□□□ -0.35
MRPL35-201ENST00000254644 FAM129CQ86XR2 697 aa12.86□□□□□ -0.35
MRPL35-201ENST00000254644 TRAM1L1Q8N609 369 aa12.86□□□□□ -0.35
MRPL35-201ENST00000254644 AVL9Q8NBF6 648 aa12.86□□□□□ -0.35
MRPL35-201ENST00000254644 NCSTNQ92542 709 aa12.86□□□□□ -0.35
MRPL35-201ENST00000254644 ZNF830Q96NB3 372 aaPredicted RBP12.86□□□□□ -0.35
MRPL35-201ENST00000254644 TBC1D10AQ9BXI6 508 aa12.86□□□□□ -0.35
MRPL35-201ENST00000254644 OR2AG1Q9H205 316 aa12.86□□□□□ -0.35
MRPL35-201ENST00000254644 STN1Q9H668 368 aaKnown RBP12.86□□□□□ -0.35
MRPL35-201ENST00000254644 RAD18Q9NS91 495 aa12.86□□□□□ -0.35
MRPL35-201ENST00000254644 OGFRQ9NZT2 677 aa12.86□□□□□ -0.35
MRPL35-201ENST00000254644 SCHIP1Q9P0W5 487 aaPredicted RBP12.86□□□□□ -0.35
MRPL35-201ENST00000254644 ZNF624Q9P2J8 865 aaPredicted RBP12.86□□□□□ -0.35
MRPL35-201ENST00000254644 SLC23A2Q9UGH3 650 aa12.86□□□□□ -0.35
MRPL35-201ENST00000254644 IL17BQ9UHF5 180 aa12.86□□□□□ -0.35
MRPL35-201ENST00000254644 TUBD1Q9UJT1 453 aa12.86□□□□□ -0.35
MRPL35-201ENST00000254644 HEY1Q9Y5J3 304 aa12.86□□□□□ -0.35
MRPL35-201ENST00000254644 SPTBP11277 2137 aa12.86□□□□□ -0.35
MRPL35-201ENST00000254644 LRRD1A4D1F6 860 aa12.85□□□□□ -0.35
MRPL35-201ENST00000254644 A8MU76 341 aa12.85□□□□□ -0.35
MRPL35-201ENST00000254644 PPFIA2O75334 1257 aa12.85□□□□□ -0.35
MRPL35-201ENST00000254644 SLC25A14O95258 325 aaPredicted RBP12.85□□□□□ -0.35
MRPL35-201ENST00000254644 DLGAP3O95886 979 aa12.85□□□□□ -0.35
MRPL35-201ENST00000254644 SLC19A1P41440 591 aa12.85□□□□□ -0.35
MRPL35-201ENST00000254644 CDK18Q07002 472 aa12.85□□□□□ -0.35
MRPL35-201ENST00000254644 AP1B1Q10567 949 aa12.85□□□□□ -0.35
MRPL35-201ENST00000254644 PDK1Q15118 436 aa12.85□□□□□ -0.35
MRPL35-201ENST00000254644 TAZQ16635 292 aa12.85□□□□□ -0.35
MRPL35-201ENST00000254644 CRTC2Q53ET0 693 aaPredicted RBP12.85□□□□□ -0.35
MRPL35-201ENST00000254644 TEX44Q53QW1 395 aa12.85□□□□□ -0.35
MRPL35-201ENST00000254644 ABRAXAS1Q6UWZ7 409 aa12.85□□□□□ -0.35
MRPL35-201ENST00000254644 NPNTQ6UXI9 565 aa12.85□□□□□ -0.35
MRPL35-201ENST00000254644 WASH2PQ6VEQ5 465 aa12.85□□□□□ -0.35
MRPL35-201ENST00000254644 ATG14Q6ZNE5 492 aa12.85□□□□□ -0.35
MRPL35-201ENST00000254644 TMEM26Q6ZUK4 368 aa12.85□□□□□ -0.35
MRPL35-201ENST00000254644 C11orf96Q7Z7L8 435 aa12.85□□□□□ -0.35
MRPL35-201ENST00000254644 PHYKPLQ8IUZ5 450 aa12.85□□□□□ -0.35
MRPL35-201ENST00000254644 ZNF547Q8IVP9 402 aa12.85□□□□□ -0.35
MRPL35-201ENST00000254644 NLGN4XQ8N0W4 816 aa12.85□□□□□ -0.35
MRPL35-201ENST00000254644 NLGN4YQ8NFZ3 816 aaPredicted RBP12.85□□□□□ -0.35
MRPL35-201ENST00000254644 DTX3LQ8TDB6 740 aa12.85□□□□□ -0.35
MRPL35-201ENST00000254644 GLYATL1Q969I3 302 aa12.85□□□□□ -0.35
MRPL35-201ENST00000254644 CATSPER2Q96P56 530 aa12.85□□□□□ -0.35
MRPL35-201ENST00000254644 VPS35Q96QK1 796 aa12.85□□□□□ -0.35
MRPL35-201ENST00000254644 CHP1Q99653 195 aa12.85□□□□□ -0.35
MRPL35-201ENST00000254644 SPATA16Q9BXB7 569 aa12.85□□□□□ -0.35
MRPL35-201ENST00000254644 CEP41Q9BYV8 373 aa12.85□□□□□ -0.35
MRPL35-201ENST00000254644 BRD8Q9H0E9 1235 aa12.85□□□□□ -0.35
MRPL35-201ENST00000254644 APMAPQ9HDC9 416 aa12.85□□□□□ -0.35
MRPL35-201ENST00000254644 ARFGAP3Q9NP61 516 aa12.85□□□□□ -0.35
MRPL35-201ENST00000254644 WASH6PQ9NQA3 447 aa12.85□□□□□ -0.35
MRPL35-201ENST00000254644 KLC4Q9NSK0 619 aa12.85□□□□□ -0.35
MRPL35-201ENST00000254644 TMPRSS11EQ9UL52 423 aa12.85□□□□□ -0.35
MRPL35-201ENST00000254644 SHOC2Q9UQ13 582 aa12.85□□□□□ -0.35
MRPL35-201ENST00000254644 ZNF711Q9Y462 761 aa12.85□□□□□ -0.35
MRPL35-201ENST00000254644 HEMK1Q9Y5R4 338 aaPredicted RBP12.85□□□□□ -0.35
MRPL35-201ENST00000254644 PIKFYVEQ9Y2I7 2098 aa12.85□□□□□ -0.35
MRPL35-201ENST00000254644 LOC101059948A0A1B0GTJ6 334 aa12.84□□□□□ -0.35
MRPL35-201ENST00000254644 ZNF891A8MT65 544 aaPredicted RBP12.84□□□□□ -0.35
MRPL35-201ENST00000254644 APOL1O14791 398 aa12.84□□□□□ -0.35
MRPL35-201ENST00000254644 TOX3O15405 576 aaPredicted RBP12.84□□□□□ -0.35
MRPL35-201ENST00000254644 VEGFDO43915 354 aa12.84□□□□□ -0.35
MRPL35-201ENST00000254644 SNX2O60749 519 aa12.84□□□□□ -0.35
MRPL35-201ENST00000254644 MT-CYBP00156 380 aaPredicted RBP12.84□□□□□ -0.35
MRPL35-201ENST00000254644 PIRTP0C851 137 aa12.84□□□□□ -0.35
MRPL35-201ENST00000254644 BRAFP15056 766 aa12.84□□□□□ -0.35
MRPL35-201ENST00000254644 ZFXP17010 805 aaPredicted RBP12.84□□□□□ -0.35
MRPL35-201ENST00000254644 BPIP17213 487 aa12.84□□□□□ -0.35
MRPL35-201ENST00000254644 ABHD18Q0P651 414 aa12.84□□□□□ -0.35
MRPL35-201ENST00000254644 MAP7Q14244 749 aa12.84□□□□□ -0.35
MRPL35-201ENST00000254644 KHDC1Q4VXA5 237 aaKnown RBP12.84□□□□□ -0.35
MRPL35-201ENST00000254644 ZNF569Q5MCW4 686 aa12.84□□□□□ -0.35
MRPL35-201ENST00000254644 SNAP47Q5SQN1 464 aa12.84□□□□□ -0.35
MRPL35-201ENST00000254644 PLXDC1Q8IUK5 500 aa12.84□□□□□ -0.35
MRPL35-201ENST00000254644 SPATA22Q8NHS9 363 aa12.84□□□□□ -0.35
MRPL35-201ENST00000254644 C9orf72Q96LT7 481 aa12.84□□□□□ -0.35
MRPL35-201ENST00000254644 TEKT5Q96M29 485 aa12.84□□□□□ -0.35
MRPL35-201ENST00000254644 AGAP3Q96P47 875 aa12.84□□□□□ -0.35
MRPL35-201ENST00000254644 SRPK1Q96SB4 655 aaKnown RBP12.84□□□□□ -0.35
MRPL35-201ENST00000254644 CTRCQ99895 268 aa12.84□□□□□ -0.35
MRPL35-201ENST00000254644 TIMM29Q9BSF4 260 aa12.84□□□□□ -0.35
MRPL35-201ENST00000254644 TRIT1Q9H3H1 467 aaKnown RBP12.84□□□□□ -0.35
MRPL35-201ENST00000254644 GLOD4Q9HC38 313 aa12.84□□□□□ -0.35
MRPL35-201ENST00000254644 SPO11Q9Y5K1 396 aa12.84□□□□□ -0.35
MRPL35-201ENST00000254644 SLC30A1Q9Y6M5 507 aa12.84□□□□□ -0.35
MRPL35-201ENST00000254644 MED13Q9UHV7 2174 aa12.84□□□□□ -0.35
MRPL35-201ENST00000254644 LOC285095A0A1B0GVY8 99 aa12.83□□□□□ -0.36
MRPL35-201ENST00000254644 AURKAO14965 403 aa12.83□□□□□ -0.36
MRPL35-201ENST00000254644 PPP1R12AO14974 1030 aaPredicted RBP12.83□□□□□ -0.36
MRPL35-201ENST00000254644 KMOO15229 486 aa12.83□□□□□ -0.36
MRPL35-201ENST00000254644 NKX2-8O15522 239 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms