RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 GSTT2P0CG29 244 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 ACSL1P33121 698 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 POLR2JP52435 117 aaKnown RBP13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 GRB14Q14449 540 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 NPTX1Q15818 432 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 ADAMTSL2Q86TH1 951 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 MIB1Q86YT6 1006 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 DNAJA4Q8WW22 397 aaPredicted RBP13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 TRIM2Q9C040 744 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 DPAGT1Q9H3H5 408 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 PIDD1Q9HB75 910 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 INTS7Q9NVH2 962 aaKnown RBP13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 UBQLN2Q9UHD9 624 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 ZNF451Q9Y4E5 1061 aa13.08□□□□□ -0.32
PCDHGA3-201ENST00000253812 K7EPI3 171 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 IFNGP01579 166 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 GLDCP23378 1020 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 PTX3P26022 381 aaPredicted RBP13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 FOXN2P32314 431 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 ZNF81P51508 661 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 SLC6A3Q01959 620 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 ZNF45Q02386 682 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 SYT16Q17RD7 645 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 VPS26BQ4G0F5 336 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 ARL13AQ5H913 290 aaPredicted RBP13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 MAP1SQ66K74 1059 aaPredicted RBP13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 CXorf57Q6NSI4 855 aaKnown RBP13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 GLT6D1Q7Z4J2 308 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 RALGPS2Q86X27 583 aaPredicted RBP13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 FAM71AQ8IYT1 594 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 SPERTQ8NA61 448 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 SLC4A11Q8NBS3 891 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 TRUB1Q8WWH5 349 aaKnown RBP13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 CREB3L1Q96BA8 519 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 BIRC8Q96P09 236 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 GAD1Q99259 594 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 ST14Q9Y5Y6 855 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 STMND1H3BQB6 276 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 RLN2P04090 185 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 RPN2P04844 631 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 RAP2AP10114 183 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 YBX3P16989 372 aaKnown RBP eCLIP13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 ZNF14P17017 642 aaPredicted RBP13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 CLCN3P51790 818 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 TDRD10Q5VZ19 366 aaKnown RBP13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 CYP4X1Q8N118 509 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 ZFP28Q8NHY6 868 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 SNIP1Q8TAD8 396 aaKnown RBP13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 RC3H2Q9HBD1 1191 aaKnown RBP13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 FARSAQ9Y285 508 aaKnown RBP13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 N6AMT1Q9Y5N5 214 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 FFAR3O14843 346 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 GPR42O15529 346 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 ERN1O75460 977 aaKnown RBP13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 SUPT20HL2P0C7V6 817 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 RORAP35398 523 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 GTF2A2P52657 109 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 FAPQ12884 760 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 RPA4Q13156 261 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 AMHR2Q16671 573 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 KLHL35Q6PF15 583 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 FOXR2Q6PJQ5 311 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 COLGALT2Q8IYK4 626 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 CCDC107Q8WV48 283 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 MTFMTQ96DP5 389 aaKnown RBP13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 PURBQ96QR8 312 aaKnown RBP13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 SLC30A2Q9BRI3 323 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 POLR2J2Q9GZM3 115 aaKnown RBP13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 TMLHEQ9NVH6 421 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 QPCTLQ9NXS2 382 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 PCDHB12Q9Y5F1 795 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 IL32P24001 234 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 TKTL1P51854 596 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 ADAM8P78325 824 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 BOP1Q14137 746 aaKnown RBP13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 TAF13Q15543 124 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 DLG2Q15700 870 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 LSM12Q3MHD2 195 aaKnown RBP13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 ATP13A4Q4VNC1 1196 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 FAM156AQ8NDB6 213 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 SRFBP1Q8NEF9 429 aaKnown RBP13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 UBE2E3Q969T4 207 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 MMP27Q9H306 513 aa13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 PAQR5Q9NXK6 330 aaPredicted RBP13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 SUCOQ9UBS9 1254 aaKnown RBP13.07□□□□□ -0.32
PCDHGA3-201ENST00000253812 FXYD6-FXYD2A0A087WZ82 144 aa13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 A0A0J9YVX5 310 aa13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 TFPTP0C1Z6 253 aa13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 EPORP19235 508 aa13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 RPL4P36578 427 aaKnown RBP13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 IDH3AP50213 366 aa13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 CYP2A13Q16696 494 aa13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 OXR1Q8N573 874 aa13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 SMG7Q92540 1137 aaKnown RBP13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 ISOC1Q96CN7 298 aa13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 ASB9Q96DX5 294 aa13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 CEP295NLQ96MC4 621 aa13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 FXYD6Q9H0Q3 95 aa13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 PCDH10Q9P2E7 1040 aa13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 NFAT5O94916 1531 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms