RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 SLC6A2P23975 617 aa21.79■■□□□ 1.08
SMARCD2-201ENST00000225742 GRIA3P42263 894 aa21.79■■□□□ 1.08
SMARCD2-201ENST00000225742 GPNMBQ14956 572 aa21.79■■□□□ 1.08
SMARCD2-201ENST00000225742 INO80DQ53TQ3 878 aaPredicted RBP21.79■■□□□ 1.08
SMARCD2-201ENST00000225742 CTSL3PQ5NE16 218 aa21.79■■□□□ 1.08
SMARCD2-201ENST00000225742 PSAPL1Q6NUJ1 521 aa21.79■■□□□ 1.08
SMARCD2-201ENST00000225742 GPRIN3Q6ZVF9 776 aa21.79■■□□□ 1.08
SMARCD2-201ENST00000225742 CD200R1Q8TD46 325 aa21.79■■□□□ 1.08
SMARCD2-201ENST00000225742 SLC45A3Q96JT2 553 aa21.79■■□□□ 1.08
SMARCD2-201ENST00000225742 EXOC2Q96KP1 924 aa21.79■■□□□ 1.08
SMARCD2-201ENST00000225742 HAUS8Q9BT25 410 aa21.79■■□□□ 1.08
SMARCD2-201ENST00000225742 SEMA6AQ9H2E6 1030 aa21.79■■□□□ 1.08
SMARCD2-201ENST00000225742 GIMAP2Q9UG22 337 aa21.79■■□□□ 1.08
SMARCD2-201ENST00000225742 STOML2Q9UJZ1 356 aa21.79■■□□□ 1.08
SMARCD2-201ENST00000225742 PCDHA9Q9Y5H5 950 aa21.79■■□□□ 1.08
SMARCD2-201ENST00000225742 EME2A4GXA9 379 aaPredicted RBP21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 TBKBP1A7MCY6 615 aa21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 NT5C1B-RDH14C9J2C7 533 aa21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 EEDO75530 441 aaKnown RBP21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 HMGA1P17096 107 aaKnown RBP21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 PPP3CCP48454 512 aa21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 NR1H2P55055 460 aa21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 NME5P56597 212 aa21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 ERVK-8P63133 956 aa21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 TRAF2Q12933 501 aa21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 LSAMPQ13449 338 aa21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 RCAN2Q14206 197 aa21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 RBBP7Q16576 425 aa21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 ZRANB3Q5FWF4 1079 aa21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 MTX3Q5HYI7 312 aa21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 INTS11Q5TA45 600 aaKnown RBP21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 LHX8Q68G74 356 aa21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 BORAQ6PGQ7 559 aa21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 CARM1Q86X55 608 aa21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 PIANPQ8IYJ0 282 aa21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 ALDH16A1Q8IZ83 802 aa21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 LRRC43Q8N309 656 aa21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 PPWD1Q96BP3 646 aaKnown RBP21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 LINGO1Q96FE5 620 aa21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 C19orf43Q9BQ61 176 aa21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 SLC39A3Q9BRY0 314 aa21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 KLF16Q9BXK1 252 aaPredicted RBP21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 MUC3BQ9H195 1237 aa21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 CMTM6Q9NX76 183 aa21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 LEF1Q9UJU2 399 aaPredicted RBP21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 PCDHB1Q9Y5F3 818 aa21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 PCDHGC4Q9Y5F7 938 aa21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 TMCC1O94876 653 aa21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 PGM3O95394 542 aa21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 GPIP06744 558 aa21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 FCGR1AP12314 374 aa21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 ARF5P84085 180 aa21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 CACNG1Q06432 222 aa21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 CXorf57Q6NSI4 855 aaKnown RBP21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 CERS6Q6ZMG9 384 aa21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 ZBTB49Q6ZSB9 765 aa21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 SIDT2Q8NBJ9 832 aaKnown RBP21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 BCL7CQ8WUZ0 217 aaPredicted RBP21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 CANT1Q8WVQ1 401 aa21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 ZBED2Q9BTP6 218 aa21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 NOL11Q9H8H0 719 aaKnown RBP21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 APPL1Q9UKG1 709 aa21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 TNPO3Q9Y5L0 923 aaKnown RBP21.78■■□□□ 1.08
SMARCD2-201ENST00000225742 KANSL1LA0AUZ9 987 aa21.77■■□□□ 1.08
SMARCD2-201ENST00000225742 DHRS12A0PJE2 317 aa21.77■■□□□ 1.08
SMARCD2-201ENST00000225742 ADAM12O43184 909 aa21.77■■□□□ 1.08
SMARCD2-201ENST00000225742 NIPSNAP2O75323 286 aa21.77■■□□□ 1.08
SMARCD2-201ENST00000225742 SLC22A3O75751 556 aa21.77■■□□□ 1.08
SMARCD2-201ENST00000225742 CSPG5O95196 566 aa21.77■■□□□ 1.08
SMARCD2-201ENST00000225742 PSMA4P25789 261 aaKnown RBP21.77■■□□□ 1.08
SMARCD2-201ENST00000225742 OR1D2P34982 312 aa21.77■■□□□ 1.08
SMARCD2-201ENST00000225742 CDKN1CP49918 316 aaPredicted RBP21.77■■□□□ 1.08
SMARCD2-201ENST00000225742 SGSHP51688 502 aa21.77■■□□□ 1.08
SMARCD2-201ENST00000225742 EEFSECP57772 596 aaKnown RBP21.77■■□□□ 1.08
SMARCD2-201ENST00000225742 PRKCQQ04759 706 aa21.77■■□□□ 1.08
SMARCD2-201ENST00000225742 PRR23BQ6ZRT6 265 aa21.77■■□□□ 1.08
SMARCD2-201ENST00000225742 TMEM173Q86WV6 379 aaPredicted RBP21.77■■□□□ 1.08
SMARCD2-201ENST00000225742 PTRH1Q86Y79 214 aaKnown RBP21.77■■□□□ 1.08
SMARCD2-201ENST00000225742 TRMT2BQ96GJ1 504 aaKnown RBP21.77■■□□□ 1.08
SMARCD2-201ENST00000225742 P2RY12Q9H244 342 aa21.77■■□□□ 1.08
SMARCD2-201ENST00000225742 IL1RL2Q9HB29 575 aa21.77■■□□□ 1.08
SMARCD2-201ENST00000225742 CD274Q9NZQ7 290 aa21.77■■□□□ 1.08
SMARCD2-201ENST00000225742 THEGQ9P2T0 379 aa21.77■■□□□ 1.08
SMARCD2-201ENST00000225742 GALPQ9UBC7 116 aa21.77■■□□□ 1.08
SMARCD2-201ENST00000225742 HCSTQ9UBK5 93 aa21.77■■□□□ 1.08
SMARCD2-201ENST00000225742 LHX3Q9UBR4 397 aa21.77■■□□□ 1.08
SMARCD2-201ENST00000225742 FAM234BA2RU67 622 aa21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 E5RI56 91 aa21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 AKAP10O43572 662 aa21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 NFYCQ13952 458 aa21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 RBBP5Q15291 538 aaKnown RBP21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 NRF1Q16656 503 aa21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 TBCELQ5QJ74 424 aa21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 FAM219BQ5XKK7 198 aa21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 IYDQ6PHW0 289 aa21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 AMIGO2Q86SJ2 522 aa21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 HOMEZQ8IX15 550 aa21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 EFHBQ8N7U6 833 aa21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 MFSD2AQ8NA29 543 aa21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 EEF1AKMT1Q8WVE0 214 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms