RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 EPB42P16452 691 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 AQP1P29972 269 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 SLC6A4P31645 630 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 GJA8P48165 433 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 DGCR6Q14129 220 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 FAM45BPQ6NSW5 357 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 PAQR3Q6TCH7 311 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 ANKRD46Q86W74 232 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 HORMAD1Q86X24 394 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 SLC39A11Q8N1S5 342 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 ACVR1CQ8NER5 493 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 FAM45AQ8TCE6 357 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 SLC25A51Q9H1U9 297 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 SPAG4Q9NPE6 437 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 LAMA3Q16787 3333 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 OR2AG2A6NM03 316 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 PIP5K1BO14986 540 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 RAD51BO15315 384 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 HS6ST1O60243 411 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 CYP11A1P05108 521 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 ITPKAP23677 461 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 SGSHP51688 502 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 ABRQ12979 859 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 XKR4Q5GH76 650 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 OFCC1Q8IZS5 231 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 C19orf60Q96EN9 201 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 MYEOVQ96EZ4 313 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 RMND5BQ96G75 393 aaPredicted RBP11.98□□□□□ -0.49
CHPF2-201ENST00000035307 DUS2Q9NX74 493 aaKnown RBP11.98□□□□□ -0.49
CHPF2-201ENST00000035307 CCL26Q9Y258 94 aa11.98□□□□□ -0.49
CHPF2-201ENST00000035307 POLR3HQ9Y535 204 aaPredicted RBP11.98□□□□□ -0.49
CHPF2-201ENST00000035307 EP300Q09472 2414 aaPredicted RBP11.98□□□□□ -0.49
CHPF2-201ENST00000035307 H3BQ06 376 aaPredicted RBP11.97□□□□□ -0.49
CHPF2-201ENST00000035307 PLK4O00444 970 aa11.97□□□□□ -0.49
CHPF2-201ENST00000035307 FGF3P11487 239 aaPredicted RBP11.97□□□□□ -0.49
CHPF2-201ENST00000035307 SERPINA4P29622 427 aa11.97□□□□□ -0.49
CHPF2-201ENST00000035307 KRT72Q14CN4 511 aa11.97□□□□□ -0.49
CHPF2-201ENST00000035307 C9orf50Q5SZB4 431 aa11.97□□□□□ -0.49
CHPF2-201ENST00000035307 WLSQ5T9L3 541 aa11.97□□□□□ -0.49
CHPF2-201ENST00000035307 ZYG11AQ6WRX3 759 aa11.97□□□□□ -0.49
CHPF2-201ENST00000035307 ATG16L2Q8NAA4 619 aa11.97□□□□□ -0.49
CHPF2-201ENST00000035307 TMEM174Q8WUU8 243 aa11.97□□□□□ -0.49
CHPF2-201ENST00000035307 LRTOMTQ8WZ04 291 aa11.97□□□□□ -0.49
CHPF2-201ENST00000035307 MMADHCQ9H3L0 296 aaPredicted RBP11.97□□□□□ -0.49
CHPF2-201ENST00000035307 TDRKHQ9Y2W6 561 aaKnown RBP11.97□□□□□ -0.49
CHPF2-201ENST00000035307 BRCA1P38398 1863 aaKnown RBP11.97□□□□□ -0.49
CHPF2-201ENST00000035307 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.97□□□□□ -0.49
CHPF2-201ENST00000035307 OR4F21O95013 312 aa11.97□□□□□ -0.49
CHPF2-201ENST00000035307 LDLRP01130 860 aa11.97□□□□□ -0.49
CHPF2-201ENST00000035307 KLKB1P03952 638 aa11.97□□□□□ -0.49
CHPF2-201ENST00000035307 EPHX1P07099 455 aa11.97□□□□□ -0.49
CHPF2-201ENST00000035307 IL5RAQ01344 420 aa11.97□□□□□ -0.49
CHPF2-201ENST00000035307 TNK2Q07912 1038 aa11.97□□□□□ -0.49
CHPF2-201ENST00000035307 HNRNPDQ14103 355 aaKnown RBP11.97□□□□□ -0.49
CHPF2-201ENST00000035307 DPYSQ14117 519 aa11.97□□□□□ -0.49
CHPF2-201ENST00000035307 MBLAC2Q68D91 279 aa11.97□□□□□ -0.49
CHPF2-201ENST00000035307 PSRC1Q6PGN9 363 aaPredicted RBP11.97□□□□□ -0.49
CHPF2-201ENST00000035307 SPESP1Q6UW49 350 aa11.97□□□□□ -0.49
CHPF2-201ENST00000035307 CLYBLQ8N0X4 340 aa11.97□□□□□ -0.49
CHPF2-201ENST00000035307 FAM47BQ8NA70 645 aa11.97□□□□□ -0.49
CHPF2-201ENST00000035307 TWIST2Q8WVJ9 160 aa11.97□□□□□ -0.49
CHPF2-201ENST00000035307 KLHL32Q96NJ5 620 aa11.97□□□□□ -0.49
CHPF2-201ENST00000035307 TMEM175Q9BSA9 504 aa11.97□□□□□ -0.49
CHPF2-201ENST00000035307 C11orf84Q9BUA3 381 aaPredicted RBP11.97□□□□□ -0.49
CHPF2-201ENST00000035307 SSU72Q9NP77 194 aaKnown RBP11.97□□□□□ -0.49
CHPF2-201ENST00000035307 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.97□□□□□ -0.49
CHPF2-201ENST00000035307 TDP1Q9NUW8 608 aa11.97□□□□□ -0.49
CHPF2-201ENST00000035307 C15orf38-AP3S2A0A0A6YYH1 394 aa11.97□□□□□ -0.49
CHPF2-201ENST00000035307 TMEM114B3SHH9 223 aa11.97□□□□□ -0.49
CHPF2-201ENST00000035307 E7ESA3 106 aa11.97□□□□□ -0.49
CHPF2-201ENST00000035307 LEFTY2O00292 366 aa11.97□□□□□ -0.49
CHPF2-201ENST00000035307 PRIM2P49643 509 aa11.97□□□□□ -0.49
CHPF2-201ENST00000035307 CCNHP51946 323 aaPredicted RBP11.97□□□□□ -0.49
CHPF2-201ENST00000035307 CASP9P55211 416 aa11.97□□□□□ -0.49
CHPF2-201ENST00000035307 PLA2G4EQ3MJ16 856 aa11.97□□□□□ -0.49
CHPF2-201ENST00000035307 GPR141Q7Z602 305 aa11.97□□□□□ -0.49
CHPF2-201ENST00000035307 ARPINQ7Z6K5 226 aa11.97□□□□□ -0.49
CHPF2-201ENST00000035307 MICU2Q8IYU8 434 aa11.97□□□□□ -0.49
CHPF2-201ENST00000035307 OR10Q1Q8NGQ4 319 aa11.97□□□□□ -0.49
CHPF2-201ENST00000035307 SPPL2AQ8TCT8 520 aa11.97□□□□□ -0.49
CHPF2-201ENST00000035307 SUSD6Q92537 303 aa11.97□□□□□ -0.49
CHPF2-201ENST00000035307 PYCR2Q96C36 320 aa11.97□□□□□ -0.49
CHPF2-201ENST00000035307 NKX2-4Q9H2Z4 354 aa11.97□□□□□ -0.49
CHPF2-201ENST00000035307 ALG2Q9H553 416 aa11.97□□□□□ -0.49
CHPF2-201ENST00000035307 PRKAG3Q9UGI9 489 aa11.97□□□□□ -0.49
CHPF2-201ENST00000035307 SNX8Q9Y5X2 465 aa11.97□□□□□ -0.49
CHPF2-201ENST00000035307 HHLA1C9JL84 531 aa11.96□□□□□ -0.49
CHPF2-201ENST00000035307 LYNP07948 512 aa11.96□□□□□ -0.49
CHPF2-201ENST00000035307 VCLP18206 1134 aa11.96□□□□□ -0.49
CHPF2-201ENST00000035307 CD68P34810 354 aaPredicted RBP11.96□□□□□ -0.49
CHPF2-201ENST00000035307 PBX2P40425 430 aa11.96□□□□□ -0.49
CHPF2-201ENST00000035307 OCA2Q04671 838 aa11.96□□□□□ -0.49
CHPF2-201ENST00000035307 NIPAL4Q0D2K0 466 aa11.96□□□□□ -0.49
CHPF2-201ENST00000035307 GALNT2Q10471 571 aa11.96□□□□□ -0.49
CHPF2-201ENST00000035307 KCTD21Q4G0X4 260 aa11.96□□□□□ -0.49
CHPF2-201ENST00000035307 ZNF789Q5FWF6 425 aa11.96□□□□□ -0.49
CHPF2-201ENST00000035307 SIRPB2Q5JXA9 342 aa11.96□□□□□ -0.49
CHPF2-201ENST00000035307 GPRIN3Q6ZVF9 776 aa11.96□□□□□ -0.49
CHPF2-201ENST00000035307 TRAPPC5Q8IUR0 188 aa11.96□□□□□ -0.49
CHPF2-201ENST00000035307 PHF12Q96QT6 1004 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms