RNA–Protein interactions for RNA: ENST00000639145.1

SCARB2-215, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-215ENST00000639145 MFSD5Q6N075 450 aa13.53□□□□□ -0.24
SCARB2-215ENST00000639145 VN1R5Q7Z5H4 357 aa13.53□□□□□ -0.24
SCARB2-215ENST00000639145 MPP5Q8N3R9 675 aa13.53□□□□□ -0.24
SCARB2-215ENST00000639145 TTC9BQ8N6N2 239 aa13.53□□□□□ -0.24
SCARB2-215ENST00000639145 SIDT2Q8NBJ9 832 aaKnown RBP13.53□□□□□ -0.24
SCARB2-215ENST00000639145 PEBP4Q96S96 227 aa13.53□□□□□ -0.24
SCARB2-215ENST00000639145 ARMC7Q9H6L4 198 aa13.53□□□□□ -0.24
SCARB2-215ENST00000639145 IPPKQ9H8X2 491 aa13.53□□□□□ -0.24
SCARB2-215ENST00000639145 PNPLA8Q9NP80 782 aa13.53□□□□□ -0.24
SCARB2-215ENST00000639145 PDLIM7Q9NR12 457 aa13.53□□□□□ -0.24
SCARB2-215ENST00000639145 SPATS2LQ9NUQ6 558 aaKnown RBP13.53□□□□□ -0.24
SCARB2-215ENST00000639145 ZNF711Q9Y462 761 aa13.53□□□□□ -0.24
SCARB2-215ENST00000639145 SNRPB2P08579 225 aaKnown RBP13.53□□□□□ -0.24
SCARB2-215ENST00000639145 ALAS2P22557 587 aa13.53□□□□□ -0.24
SCARB2-215ENST00000639145 GTF2E2P29084 291 aaKnown RBP13.53□□□□□ -0.24
SCARB2-215ENST00000639145 BMPR1AP36894 532 aa13.53□□□□□ -0.24
SCARB2-215ENST00000639145 CLK1P49759 484 aaKnown RBP13.53□□□□□ -0.24
SCARB2-215ENST00000639145 NTHL1P78549 312 aa13.53□□□□□ -0.24
SCARB2-215ENST00000639145 GRHL1Q9NZI5 618 aa13.53□□□□□ -0.24
SCARB2-215ENST00000639145 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.53□□□□□ -0.24
SCARB2-215ENST00000639145 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.53□□□□□ -0.24
SCARB2-215ENST00000639145 CNPP09543 421 aaKnown RBP13.53□□□□□ -0.24
SCARB2-215ENST00000639145 ACP5P13686 325 aa13.53□□□□□ -0.24
SCARB2-215ENST00000639145 HOXB2P14652 356 aa13.53□□□□□ -0.24
SCARB2-215ENST00000639145 NSG1P42857 185 aa13.53□□□□□ -0.24
SCARB2-215ENST00000639145 RAD23AP54725 363 aa13.53□□□□□ -0.24
SCARB2-215ENST00000639145 DEFB103AP81534 67 aa13.53□□□□□ -0.24
SCARB2-215ENST00000639145 UBAP2LQ14157 1087 aaKnown RBP13.53□□□□□ -0.24
SCARB2-215ENST00000639145 ZC3H7AQ8IWR0 971 aaKnown RBP13.53□□□□□ -0.24
SCARB2-215ENST00000639145 RDH11Q8TC12 318 aa13.53□□□□□ -0.24
SCARB2-215ENST00000639145 SPOCK2Q92563 424 aa13.53□□□□□ -0.24
SCARB2-215ENST00000639145 TADA1Q96BN2 335 aa13.53□□□□□ -0.24
SCARB2-215ENST00000639145 PANX1Q96RD7 426 aa13.53□□□□□ -0.24
SCARB2-215ENST00000639145 COPG2Q9UBF2 871 aa13.53□□□□□ -0.24
SCARB2-215ENST00000639145 MYH10P35580 1976 aa13.53□□□□□ -0.24
SCARB2-215ENST00000639145 C15orf38-AP3S2A0A0A6YYH1 394 aa13.53□□□□□ -0.24
SCARB2-215ENST00000639145 C2orf78A6NCI8 922 aa13.53□□□□□ -0.24
SCARB2-215ENST00000639145 TIMP1P01033 207 aa13.53□□□□□ -0.24
SCARB2-215ENST00000639145 ENO2P09104 434 aaPredicted RBP13.53□□□□□ -0.24
SCARB2-215ENST00000639145 NOS3P29474 1203 aa13.53□□□□□ -0.24
SCARB2-215ENST00000639145 TAF1AQ15573 450 aaPredicted RBP13.53□□□□□ -0.24
SCARB2-215ENST00000639145 B3GNT9Q6UX72 402 aa13.53□□□□□ -0.24
SCARB2-215ENST00000639145 ARPINQ7Z6K5 226 aa13.53□□□□□ -0.24
SCARB2-215ENST00000639145 CMTR2Q8IYT2 770 aaKnown RBP13.53□□□□□ -0.24
SCARB2-215ENST00000639145 CDK20Q8IZL9 346 aa13.53□□□□□ -0.24
SCARB2-215ENST00000639145 CLDN19Q8N6F1 224 aa13.53□□□□□ -0.24
SCARB2-215ENST00000639145 PROX1Q92786 737 aa13.53□□□□□ -0.24
SCARB2-215ENST00000639145 CD101Q93033 1021 aa13.53□□□□□ -0.24
SCARB2-215ENST00000639145 ABTB1Q969K4 478 aaPredicted RBP13.53□□□□□ -0.24
SCARB2-215ENST00000639145 RIOK2Q9BVS4 552 aaKnown RBP13.53□□□□□ -0.24
SCARB2-215ENST00000639145 ADPRHL2Q9NX46 363 aa13.53□□□□□ -0.24
SCARB2-215ENST00000639145 MARF1Q9Y4F3 1742 aaKnown RBP13.52□□□□□ -0.24
SCARB2-215ENST00000639145 RBM47A0AV96 593 aaKnown RBP13.52□□□□□ -0.24
SCARB2-215ENST00000639145 ESR1P03372 595 aa13.52□□□□□ -0.24
SCARB2-215ENST00000639145 UMPSP11172 480 aa13.52□□□□□ -0.24
SCARB2-215ENST00000639145 SLC1A2P43004 574 aa13.52□□□□□ -0.24
SCARB2-215ENST00000639145 PTGER3P43115 390 aa13.52□□□□□ -0.24
SCARB2-215ENST00000639145 PRR23BQ6ZRT6 265 aa13.52□□□□□ -0.24
SCARB2-215ENST00000639145 CHSY3Q70JA7 882 aa13.52□□□□□ -0.24
SCARB2-215ENST00000639145 ARMCX6Q7L4S7 300 aa13.52□□□□□ -0.24
SCARB2-215ENST00000639145 ITFG1Q8TB96 612 aa13.52□□□□□ -0.24
SCARB2-215ENST00000639145 PHF21AQ96BD5 680 aa13.52□□□□□ -0.24
SCARB2-215ENST00000639145 CDKN2AIPNLQ96HQ2 116 aa13.52□□□□□ -0.24
SCARB2-215ENST00000639145 LMLNQ96KR4 655 aa13.52□□□□□ -0.24
SCARB2-215ENST00000639145 TCF12Q99081 682 aa13.52□□□□□ -0.24
SCARB2-215ENST00000639145 AIF1LQ9BQI0 150 aa13.52□□□□□ -0.24
SCARB2-215ENST00000639145 NKX2-4Q9H2Z4 354 aa13.52□□□□□ -0.24
SCARB2-215ENST00000639145 NOL11Q9H8H0 719 aaKnown RBP13.52□□□□□ -0.24
SCARB2-215ENST00000639145 CARS2Q9HA77 564 aaKnown RBP13.52□□□□□ -0.24
SCARB2-215ENST00000639145 TMEM216Q9P0N5 145 aa13.52□□□□□ -0.24
SCARB2-215ENST00000639145 TMCO1Q9UM00 188 aa13.52□□□□□ -0.24
SCARB2-215ENST00000639145 H3BN98 237 aa13.52□□□□□ -0.25
SCARB2-215ENST00000639145 BIRC5O15392 142 aa13.52□□□□□ -0.25
SCARB2-215ENST00000639145 NIPSNAP2O75323 286 aa13.52□□□□□ -0.25
SCARB2-215ENST00000639145 DEAF1O75398 565 aaPredicted RBP13.52□□□□□ -0.25
SCARB2-215ENST00000639145 EDN1P05305 212 aa13.52□□□□□ -0.25
SCARB2-215ENST00000639145 IMPDH2P12268 514 aa13.52□□□□□ -0.25
SCARB2-215ENST00000639145 DDX6P26196 483 aaKnown RBP eCLIP13.52□□□□□ -0.25
SCARB2-215ENST00000639145 MRPS22P82650 360 aaKnown RBP13.52□□□□□ -0.25
SCARB2-215ENST00000639145 ZBTB17Q13105 803 aa13.52□□□□□ -0.25
SCARB2-215ENST00000639145 ARL13AQ5H913 290 aaPredicted RBP13.52□□□□□ -0.25
SCARB2-215ENST00000639145 CLLU1OSQ5K130 101 aa13.52□□□□□ -0.25
SCARB2-215ENST00000639145 IYDQ6PHW0 289 aa13.52□□□□□ -0.25
SCARB2-215ENST00000639145 ENPP7Q6UWV6 458 aa13.52□□□□□ -0.25
SCARB2-215ENST00000639145 ARHGAP36Q6ZRI8 547 aa13.52□□□□□ -0.25
SCARB2-215ENST00000639145 DSELQ8IZU8 1212 aa13.52□□□□□ -0.25
SCARB2-215ENST00000639145 AHI1Q8N157 1196 aa13.52□□□□□ -0.25
SCARB2-215ENST00000639145 POLR3HQ9Y535 204 aaPredicted RBP13.52□□□□□ -0.25
SCARB2-215ENST00000639145 SCN9AQ15858 1988 aa13.52□□□□□ -0.25
SCARB2-215ENST00000639145 UBXN8O00124 270 aa13.52□□□□□ -0.25
SCARB2-215ENST00000639145 KCNH1O95259 989 aa13.52□□□□□ -0.25
SCARB2-215ENST00000639145 CLDN7O95471 211 aa13.52□□□□□ -0.25
SCARB2-215ENST00000639145 CLEC6AQ6EIG7 209 aa13.52□□□□□ -0.25
SCARB2-215ENST00000639145 PRMT9Q6P2P2 845 aa13.52□□□□□ -0.25
SCARB2-215ENST00000639145 SGIP1Q9BQI5 828 aa13.52□□□□□ -0.25
SCARB2-215ENST00000639145 TRMOQ9BU70 441 aa13.52□□□□□ -0.25
SCARB2-215ENST00000639145 PHACTR1Q9C0D0 580 aa13.52□□□□□ -0.25
SCARB2-215ENST00000639145 ZNF490Q9ULM2 529 aaPredicted RBP13.52□□□□□ -0.25
SCARB2-215ENST00000639145 FAM220BPB1ANY3 271 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 FAM72CH0Y354 149 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms