RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 LONRF2Q1L5Z9 754 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 HENMT1Q5T8I9 393 aaKnown RBP7.79□□□□□ -1.16
PNKP-229ENST00000637897 NKAIN2Q5VXU1 208 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 RAET1GQ6H3X3 334 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 C8orf74Q6P047 294 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 XKR5Q6UX68 686 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 HDXQ7Z353 690 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 CCNJLQ8IV13 435 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 CCDC13Q8IYE1 715 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 LPCAT1Q8NF37 534 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 SPATA22Q8NHS9 363 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 SNRNP27Q8WVK2 155 aaKnown RBP7.79□□□□□ -1.16
PNKP-229ENST00000637897 TTC9Q92623 222 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 RNF25Q96BH1 459 aaPredicted RBP7.79□□□□□ -1.16
PNKP-229ENST00000637897 AP2M1Q96CW1 435 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 MS4A14Q96JA4 679 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 FCRL3Q96P31 734 aaPredicted RBP7.79□□□□□ -1.16
PNKP-229ENST00000637897 NUDT22Q9BRQ3 303 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 RIOK2Q9BVS4 552 aaKnown RBP7.79□□□□□ -1.16
PNKP-229ENST00000637897 POLR1EQ9GZS1 481 aaKnown RBP7.79□□□□□ -1.16
PNKP-229ENST00000637897 RDH14Q9HBH5 336 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 PCDH9Q9HC56 1237 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 TRNAU1APQ9NX07 287 aaKnown RBP7.79□□□□□ -1.16
PNKP-229ENST00000637897 NCKIPSDQ9NZQ3 722 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 FOXJ2Q9P0K8 574 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 LRIT1Q9P2V4 623 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 PRKAB1Q9Y478 270 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 SPO11Q9Y5K1 396 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 ALG6Q9Y672 507 aa7.79□□□□□ -1.16
PNKP-229ENST00000637897 GCN1Q92616 2671 aaKnown RBP7.78□□□□□ -1.16
PNKP-229ENST00000637897 CCDC187A0A096LP49 1063 aa7.78□□□□□ -1.16
PNKP-229ENST00000637897 GOLGA6L10A0A0M3HER8 536 aa7.78□□□□□ -1.16
PNKP-229ENST00000637897 A0A1W2PQ67 120 aa7.78□□□□□ -1.16
PNKP-229ENST00000637897 LRRD1A4D1F6 860 aa7.78□□□□□ -1.16
PNKP-229ENST00000637897 ANKRD66B4E2M5 251 aa7.78□□□□□ -1.16
PNKP-229ENST00000637897 ATXN7O15265 892 aaPredicted RBP7.78□□□□□ -1.16
PNKP-229ENST00000637897 INPP4BO15327 924 aa7.78□□□□□ -1.16
PNKP-229ENST00000637897 DDX3YO15523 660 aaKnown RBP7.78□□□□□ -1.16
PNKP-229ENST00000637897 NUDT21O43809 227 aaKnown RBP7.78□□□□□ -1.16
PNKP-229ENST00000637897 TNFSF15O95150 251 aa7.78□□□□□ -1.16
PNKP-229ENST00000637897 MT-CYBP00156 380 aaPredicted RBP7.78□□□□□ -1.16
PNKP-229ENST00000637897 CYP2A6P11509 494 aaPredicted RBP7.78□□□□□ -1.16
PNKP-229ENST00000637897 CCL4P13236 92 aa7.78□□□□□ -1.16
PNKP-229ENST00000637897 PNLIPP16233 465 aa7.78□□□□□ -1.16
PNKP-229ENST00000637897 PTPN3P26045 913 aa7.78□□□□□ -1.16
PNKP-229ENST00000637897 CTNNA2P26232 953 aa7.78□□□□□ -1.16
PNKP-229ENST00000637897 SLC1A1P43005 524 aa7.78□□□□□ -1.16
PNKP-229ENST00000637897 GPR1P46091 355 aa7.78□□□□□ -1.16
PNKP-229ENST00000637897 SPINT3P49223 89 aa7.78□□□□□ -1.16
PNKP-229ENST00000637897 RPIAP49247 311 aa7.78□□□□□ -1.16
PNKP-229ENST00000637897 PCBP4P57723 403 aaKnown RBP7.78□□□□□ -1.16
PNKP-229ENST00000637897 ITKQ08881 620 aa7.78□□□□□ -1.16
PNKP-229ENST00000637897 SPIDRQ14159 915 aa7.78□□□□□ -1.16
PNKP-229ENST00000637897 GALNT3Q14435 633 aa7.78□□□□□ -1.16
PNKP-229ENST00000637897 PRKD1Q15139 912 aaPredicted RBP7.78□□□□□ -1.16
PNKP-229ENST00000637897 BEND6Q5SZJ8 279 aaPredicted RBP7.78□□□□□ -1.16
PNKP-229ENST00000637897 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.78□□□□□ -1.16
PNKP-229ENST00000637897 LRRC38Q5VT99 294 aa7.78□□□□□ -1.16
PNKP-229ENST00000637897 DOK6Q6PKX4 331 aa7.78□□□□□ -1.16
PNKP-229ENST00000637897 SLC30A9Q6PML9 568 aa7.78□□□□□ -1.16
PNKP-229ENST00000637897 KDELC1Q6UW63 502 aa7.78□□□□□ -1.16
PNKP-229ENST00000637897 USP45Q70EL2 814 aa7.78□□□□□ -1.16
PNKP-229ENST00000637897 MARK2Q7KZI7 788 aaKnown RBP7.78□□□□□ -1.16
PNKP-229ENST00000637897 ZNF765Q7L2R6 523 aa7.78□□□□□ -1.16
PNKP-229ENST00000637897 LYSMD3Q7Z3D4 306 aa7.78□□□□□ -1.16
PNKP-229ENST00000637897 TMC3Q7Z5M5 1100 aa7.78□□□□□ -1.16
PNKP-229ENST00000637897 ZNF761Q86XN6 746 aaPredicted RBP7.78□□□□□ -1.16
PNKP-229ENST00000637897 IFT20Q8IY31 132 aa7.78□□□□□ -1.16
PNKP-229ENST00000637897 KRT222Q8N1A0 295 aa7.78□□□□□ -1.16
PNKP-229ENST00000637897 EIF1ADQ8N9N8 165 aaKnown RBP7.78□□□□□ -1.16
PNKP-229ENST00000637897 GPR26Q8NDV2 337 aa7.78□□□□□ -1.16
PNKP-229ENST00000637897 ZNF248Q8NDW4 579 aa7.78□□□□□ -1.16
PNKP-229ENST00000637897 WDR36Q8NI36 951 aaKnown RBP7.78□□□□□ -1.16
PNKP-229ENST00000637897 ZDHHC1Q8WTX9 485 aa7.78□□□□□ -1.16
PNKP-229ENST00000637897 KRT35Q92764 455 aa7.78□□□□□ -1.16
PNKP-229ENST00000637897 IMP4Q96G21 291 aaKnown RBP7.78□□□□□ -1.16
PNKP-229ENST00000637897 GFM1Q96RP9 751 aaKnown RBP7.78□□□□□ -1.16
PNKP-229ENST00000637897 LRRC1Q9BTT6 524 aa7.78□□□□□ -1.16
PNKP-229ENST00000637897 ACBD3Q9H3P7 528 aa7.78□□□□□ -1.16
PNKP-229ENST00000637897 DPEP2Q9H4A9 486 aa7.78□□□□□ -1.16
PNKP-229ENST00000637897 C10orf88Q9H8K7 445 aa7.78□□□□□ -1.16
PNKP-229ENST00000637897 PHPT1Q9NRX4 125 aaPredicted RBP7.78□□□□□ -1.16
PNKP-229ENST00000637897 FAM53CQ9NYF3 392 aa7.78□□□□□ -1.16
PNKP-229ENST00000637897 SCHIP1Q9P0W5 487 aaPredicted RBP7.78□□□□□ -1.16
PNKP-229ENST00000637897 TBC1D29Q9UFV1 150 aa7.78□□□□□ -1.16
PNKP-229ENST00000637897 SLC23A2Q9UGH3 650 aa7.78□□□□□ -1.16
PNKP-229ENST00000637897 AMACRQ9UHK6 382 aa7.78□□□□□ -1.16
PNKP-229ENST00000637897 MOSPD1Q9UJG1 213 aa7.78□□□□□ -1.16
PNKP-229ENST00000637897 PIEZO2Q9H5I5 2752 aa7.77□□□□□ -1.16
PNKP-229ENST00000637897 TRBV23OR9-2A0A075B6M9 112 aa7.77□□□□□ -1.17
PNKP-229ENST00000637897 PRAMEF33A0A0G2JMD5 474 aa7.77□□□□□ -1.17
PNKP-229ENST00000637897 IGHV5-10-1A0A0J9YXX1 117 aa7.77□□□□□ -1.17
PNKP-229ENST00000637897 GAPDHSO14556 408 aaPredicted RBP7.77□□□□□ -1.17
PNKP-229ENST00000637897 PLD2O14939 933 aa7.77□□□□□ -1.17
PNKP-229ENST00000637897 GPR39O43194 453 aa7.77□□□□□ -1.17
PNKP-229ENST00000637897 KLK10O43240 276 aa7.77□□□□□ -1.17
PNKP-229ENST00000637897 SPOPO43791 374 aa7.77□□□□□ -1.17
PNKP-229ENST00000637897 SEC31AO94979 1220 aaKnown RBP7.77□□□□□ -1.17
PNKP-229ENST00000637897 ITGA2BP08514 1039 aa7.77□□□□□ -1.17
PNKP-229ENST00000637897 KRT7P08729 469 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms