RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 HEXDCQ8WVB3 486 aa15.24■□□□□ 0.03
CLN6-219ENST00000637329 FAM131CQ96AQ9 280 aa15.24■□□□□ 0.03
CLN6-219ENST00000637329 DTD2Q96FN9 168 aa15.24■□□□□ 0.03
CLN6-219ENST00000637329 COQ10AQ96MF6 247 aa15.24■□□□□ 0.03
CLN6-219ENST00000637329 BIRC8Q96P09 236 aa15.24■□□□□ 0.03
CLN6-219ENST00000637329 CLPBQ9H078 707 aa15.24■□□□□ 0.03
CLN6-219ENST00000637329 NSRP1Q9H0G5 558 aaKnown RBP15.24■□□□□ 0.03
CLN6-219ENST00000637329 GPAMQ9HCL2 828 aa15.24■□□□□ 0.03
CLN6-219ENST00000637329 MLXIPLQ9NP71 852 aa15.24■□□□□ 0.03
CLN6-219ENST00000637329 GNPTGQ9UJJ9 305 aa15.24■□□□□ 0.03
CLN6-219ENST00000637329 EMCNQ9ULC0 261 aa15.24■□□□□ 0.03
CLN6-219ENST00000637329 SCML1Q9UN30 329 aa15.24■□□□□ 0.03
CLN6-219ENST00000637329 DUSP12Q9UNI6 340 aa15.24■□□□□ 0.03
CLN6-219ENST00000637329 IGLV3-16A0A075B6K0 115 aa15.23■□□□□ 0.03
CLN6-219ENST00000637329 GMNCA6NCL1 334 aa15.23■□□□□ 0.03
CLN6-219ENST00000637329 KLF11O14901 512 aa15.23■□□□□ 0.03
CLN6-219ENST00000637329 VPS26AO75436 327 aa15.23■□□□□ 0.03
CLN6-219ENST00000637329 HOXB2P14652 356 aa15.23■□□□□ 0.03
CLN6-219ENST00000637329 SAT1P21673 171 aa15.23■□□□□ 0.03
CLN6-219ENST00000637329 DRD3P35462 400 aa15.23■□□□□ 0.03
CLN6-219ENST00000637329 NSG1P42857 185 aa15.23■□□□□ 0.03
CLN6-219ENST00000637329 CDKN1CP49918 316 aaPredicted RBP15.23■□□□□ 0.03
CLN6-219ENST00000637329 METAP1P53582 386 aa15.23■□□□□ 0.03
CLN6-219ENST00000637329 COPAP53621 1224 aa15.23■□□□□ 0.03
CLN6-219ENST00000637329 IRF9Q00978 393 aa15.23■□□□□ 0.03
CLN6-219ENST00000637329 ZBTB16Q05516 673 aa15.23■□□□□ 0.03
CLN6-219ENST00000637329 PDAP1Q13442 181 aaKnown RBP15.23■□□□□ 0.03
CLN6-219ENST00000637329 CTSL3PQ5NE16 218 aa15.23■□□□□ 0.03
CLN6-219ENST00000637329 PIP5KL1Q5T9C9 394 aa15.23■□□□□ 0.03
CLN6-219ENST00000637329 AGAP9Q5VTM2 703 aa15.23■□□□□ 0.03
CLN6-219ENST00000637329 UGT3A1Q6NUS8 523 aa15.23■□□□□ 0.03
CLN6-219ENST00000637329 KLC3Q6P597 504 aa15.23■□□□□ 0.03
CLN6-219ENST00000637329 TECPR1Q7Z6L1 1165 aa15.23■□□□□ 0.03
CLN6-219ENST00000637329 ARMC2Q8NEN0 867 aa15.23■□□□□ 0.03
CLN6-219ENST00000637329 LRRC8CQ8TDW0 803 aa15.23■□□□□ 0.03
CLN6-219ENST00000637329 UBXN10Q96LJ8 280 aa15.23■□□□□ 0.03
CLN6-219ENST00000637329 ZNF317Q96PQ6 595 aaPredicted RBP15.23■□□□□ 0.03
CLN6-219ENST00000637329 VPS35Q96QK1 796 aa15.23■□□□□ 0.03
CLN6-219ENST00000637329 PAIP2Q9BPZ3 127 aaKnown RBP15.23■□□□□ 0.03
CLN6-219ENST00000637329 FAM83DQ9H4H8 585 aa15.23■□□□□ 0.03
CLN6-219ENST00000637329 ZDHHC3Q9NYG2 299 aa15.23■□□□□ 0.03
CLN6-219ENST00000637329 SIRPGQ9P1W8 387 aa15.23■□□□□ 0.03
CLN6-219ENST00000637329 OAS3Q9Y6K5 1087 aaKnown RBP15.23■□□□□ 0.03
CLN6-219ENST00000637329 WNT9AO14904 365 aa15.22■□□□□ 0.03
CLN6-219ENST00000637329 TSPAN6O43657 245 aa15.22■□□□□ 0.03
CLN6-219ENST00000637329 NARSO43776 548 aaKnown RBP15.22■□□□□ 0.03
CLN6-219ENST00000637329 RHOBTB1O94844 696 aa15.22■□□□□ 0.03
CLN6-219ENST00000637329 KLF8O95600 359 aaPredicted RBP15.22■□□□□ 0.03
CLN6-219ENST00000637329 TOP3BO95985 862 aaKnown RBP15.22■□□□□ 0.03
CLN6-219ENST00000637329 FAM107AO95990 144 aa15.22■□□□□ 0.03
CLN6-219ENST00000637329 LTA4HP09960 611 aaKnown RBP15.22■□□□□ 0.03
CLN6-219ENST00000637329 IL9P15248 144 aa15.22■□□□□ 0.03
CLN6-219ENST00000637329 ZNF37AP17032 561 aaPredicted RBP15.22■□□□□ 0.03
CLN6-219ENST00000637329 SKIV2L2P42285 1042 aaKnown RBP15.22■□□□□ 0.03
CLN6-219ENST00000637329 WASP42768 502 aa15.22■□□□□ 0.03
CLN6-219ENST00000637329 LIG3P49916 1009 aa15.22■□□□□ 0.03
CLN6-219ENST00000637329 SEMG2Q02383 582 aa15.22■□□□□ 0.03
CLN6-219ENST00000637329 CNTN1Q12860 1018 aa15.22■□□□□ 0.03
CLN6-219ENST00000637329 CCINQ13939 588 aa15.22■□□□□ 0.03
CLN6-219ENST00000637329 ZNF460Q14592 562 aa15.22■□□□□ 0.03
CLN6-219ENST00000637329 ATP13A5Q4VNC0 1218 aa15.22■□□□□ 0.03
CLN6-219ENST00000637329 EOGTQ5NDL2 527 aa15.22■□□□□ 0.03
CLN6-219ENST00000637329 AGBL4Q5VU57 503 aa15.22■□□□□ 0.03
CLN6-219ENST00000637329 NLRP8Q86W28 1048 aa15.22■□□□□ 0.03
CLN6-219ENST00000637329 DDHD1Q8NEL9 900 aa15.22■□□□□ 0.03
CLN6-219ENST00000637329 CXorf40AQ8TE69 158 aa15.22■□□□□ 0.03
CLN6-219ENST00000637329 KCTD4Q8WVF5 259 aa15.22■□□□□ 0.03
CLN6-219ENST00000637329 SREK1Q8WXA9 508 aaKnown RBP15.22■□□□□ 0.03
CLN6-219ENST00000637329 FAM3CQ92520 227 aa15.22■□□□□ 0.03
CLN6-219ENST00000637329 COPS8Q99627 209 aa15.22■□□□□ 0.03
CLN6-219ENST00000637329 SPATA16Q9BXB7 569 aa15.22■□□□□ 0.03
CLN6-219ENST00000637329 IRF2BPLQ9H1B7 796 aa15.22■□□□□ 0.03
CLN6-219ENST00000637329 FAM96AQ9H5X1 160 aa15.22■□□□□ 0.03
CLN6-219ENST00000637329 NMRAL1Q9HBL8 299 aa15.22■□□□□ 0.03
CLN6-219ENST00000637329 SYTL2Q9HCH5 934 aa15.22■□□□□ 0.03
CLN6-219ENST00000637329 ZDHHC4Q9NPG8 344 aa15.22■□□□□ 0.03
CLN6-219ENST00000637329 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.22■□□□□ 0.03
CLN6-219ENST00000637329 ITM2BQ9Y287 266 aa15.22■□□□□ 0.03
CLN6-219ENST00000637329 FADS3Q9Y5Q0 445 aa15.22■□□□□ 0.03
CLN6-219ENST00000637329 CACNA1AO00555 2505 aa15.21■□□□□ 0.03
CLN6-219ENST00000637329 CFAP99D6REC4 459 aa15.21■□□□□ 0.03
CLN6-219ENST00000637329 E5RI56 91 aa15.21■□□□□ 0.03
CLN6-219ENST00000637329 F8W8V4 182 aa15.21■□□□□ 0.03
CLN6-219ENST00000637329 QSOX1O00391 747 aa15.21■□□□□ 0.03
CLN6-219ENST00000637329 NEMP1O14524 444 aa15.21■□□□□ 0.03
CLN6-219ENST00000637329 MID1O15344 667 aa15.21■□□□□ 0.03
CLN6-219ENST00000637329 GPR39O43194 453 aa15.21■□□□□ 0.03
CLN6-219ENST00000637329 ADAM23O75077 832 aa15.21■□□□□ 0.03
CLN6-219ENST00000637329 H2AFYO75367 372 aaKnown RBP15.21■□□□□ 0.03
CLN6-219ENST00000637329 BPGMP07738 259 aa15.21■□□□□ 0.03
CLN6-219ENST00000637329 C6P13671 934 aa15.21■□□□□ 0.03
CLN6-219ENST00000637329 TAC1P20366 129 aa15.21■□□□□ 0.03
CLN6-219ENST00000637329 FMO4P31512 558 aa15.21■□□□□ 0.03
CLN6-219ENST00000637329 ETV3P41162 512 aa15.21■□□□□ 0.03
CLN6-219ENST00000637329 RPS14P62263 151 aaKnown RBP15.21■□□□□ 0.03
CLN6-219ENST00000637329 PPARDQ03181 441 aa15.21■□□□□ 0.03
CLN6-219ENST00000637329 PRKCQQ04759 706 aa15.21■□□□□ 0.03
CLN6-219ENST00000637329 DPTQ07507 201 aa15.21■□□□□ 0.03
CLN6-219ENST00000637329 SFSWAPQ12872 951 aaKnown RBP15.21■□□□□ 0.03
CLN6-219ENST00000637329 ACOX1Q15067 660 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms