RNA–Protein interactions for RNA: ENST00000625916.1

SCN1A-208, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 4

Gene SCN1A, Length 560 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-208ENST00000625916 QSOX2Q6ZRP7 698 aa2.62□□□□□ -1.99
SCN1A-208ENST00000625916 MYCT1Q8N699 235 aa2.62□□□□□ -1.99
SCN1A-208ENST00000625916 SLC44A1Q8WWI5 657 aa2.62□□□□□ -1.99
SCN1A-208ENST00000625916 DNAAF4Q8WXU2 420 aa2.62□□□□□ -1.99
SCN1A-208ENST00000625916 PHF21AQ96BD5 680 aa2.62□□□□□ -1.99
SCN1A-208ENST00000625916 ELP4Q96EB1 424 aa2.62□□□□□ -1.99
SCN1A-208ENST00000625916 KLHL8Q9P2G9 620 aaPredicted RBP2.62□□□□□ -1.99
SCN1A-208ENST00000625916 PYGO1Q9Y3Y4 419 aa2.62□□□□□ -1.99
SCN1A-208ENST00000625916 DISP3Q9P2K9 1392 aa2.61□□□□□ -1.99
SCN1A-208ENST00000625916 OR5K3A6NET4 321 aa2.61□□□□□ -1.99
SCN1A-208ENST00000625916 VCYO14598 125 aa2.61□□□□□ -1.99
SCN1A-208ENST00000625916 SRSF10O75494 262 aaKnown RBP2.61□□□□□ -1.99
SCN1A-208ENST00000625916 ACADSP16219 412 aa2.61□□□□□ -1.99
SCN1A-208ENST00000625916 MCCP23508 829 aa2.61□□□□□ -1.99
SCN1A-208ENST00000625916 CDH15P55291 814 aa2.61□□□□□ -1.99
SCN1A-208ENST00000625916 CLDN20P56880 219 aa2.61□□□□□ -1.99
SCN1A-208ENST00000625916 DECR1Q16698 335 aa2.61□□□□□ -1.99
SCN1A-208ENST00000625916 ASPRV1Q53RT3 343 aa2.61□□□□□ -1.99
SCN1A-208ENST00000625916 BHLHB9Q6PI77 547 aa2.61□□□□□ -1.99
SCN1A-208ENST00000625916 TRIM65Q6PJ69 517 aa2.61□□□□□ -1.99
SCN1A-208ENST00000625916 MFSD6Q6ZSS7 791 aa2.61□□□□□ -1.99
SCN1A-208ENST00000625916 RRM2BQ7LG56 351 aa2.61□□□□□ -1.99
SCN1A-208ENST00000625916 LONP2Q86WA8 852 aa2.61□□□□□ -1.99
SCN1A-208ENST00000625916 BMPERQ8N8U9 685 aa2.61□□□□□ -1.99
SCN1A-208ENST00000625916 RBM15BQ8NDT2 890 aaKnown RBP2.61□□□□□ -1.99
SCN1A-208ENST00000625916 RDM1Q8NG50 284 aa2.61□□□□□ -1.99
SCN1A-208ENST00000625916 KLHL29Q96CT2 875 aa2.61□□□□□ -1.99
SCN1A-208ENST00000625916 GMPPAQ96IJ6 420 aaPredicted RBP2.61□□□□□ -1.99
SCN1A-208ENST00000625916 ZSCAN31Q96LW9 406 aaPredicted RBP2.61□□□□□ -1.99
SCN1A-208ENST00000625916 AGAP3Q96P47 875 aa2.61□□□□□ -1.99
SCN1A-208ENST00000625916 REEP2Q9BRK0 252 aa2.61□□□□□ -1.99
SCN1A-208ENST00000625916 H2AFJQ9BTM1 129 aa2.61□□□□□ -1.99
SCN1A-208ENST00000625916 PHF7Q9BWX1 381 aaPredicted RBP2.61□□□□□ -1.99
SCN1A-208ENST00000625916 TTYH1Q9H313 450 aaPredicted RBP2.61□□□□□ -1.99
SCN1A-208ENST00000625916 TRPC7Q9HCX4 862 aa2.61□□□□□ -1.99
SCN1A-208ENST00000625916 ACSS1Q9NUB1 689 aaPredicted RBP2.61□□□□□ -1.99
SCN1A-208ENST00000625916 ATAD3AQ9NVI7 634 aa2.61□□□□□ -1.99
SCN1A-208ENST00000625916 HSPB7Q9UBY9 170 aa2.61□□□□□ -1.99
SCN1A-208ENST00000625916 TP53TG3Q9ULZ0 132 aa2.61□□□□□ -1.99
SCN1A-208ENST00000625916 CEPT1Q9Y6K0 416 aa2.61□□□□□ -1.99
SCN1A-208ENST00000625916 KIAA1210Q9ULL0 1709 aa2.61□□□□□ -1.99
SCN1A-208ENST00000625916 ZNF318Q5VUA4 2279 aa2.61□□□□□ -1.99
SCN1A-208ENST00000625916 TEX13CA0A0J9YWL9 993 aa2.6□□□□□ -1.99
SCN1A-208ENST00000625916 hCG_1642624A0A1W2PR95 340 aa2.6□□□□□ -1.99
SCN1A-208ENST00000625916 PLOD2O00469 737 aa2.6□□□□□ -1.99
SCN1A-208ENST00000625916 GUCY1B2O75343 617 aa2.6□□□□□ -1.99
SCN1A-208ENST00000625916 HMBSP08397 361 aa2.6□□□□□ -1.99
SCN1A-208ENST00000625916 IGHV4-38-2P0DP08 117 aa2.6□□□□□ -1.99
SCN1A-208ENST00000625916 GABRB2P47870 512 aa2.6□□□□□ -1.99
SCN1A-208ENST00000625916 SNRPD1P62314 119 aaKnown RBP2.6□□□□□ -1.99
SCN1A-208ENST00000625916 RPP30P78346 268 aaKnown RBP2.6□□□□□ -1.99
SCN1A-208ENST00000625916 TBX2Q13207 712 aaPredicted RBP2.6□□□□□ -1.99
SCN1A-208ENST00000625916 ENPP2Q13822 863 aa2.6□□□□□ -1.99
SCN1A-208ENST00000625916 NFIL3Q16649 462 aa2.6□□□□□ -1.99
SCN1A-208ENST00000625916 SNAI3Q3KNW1 292 aa2.6□□□□□ -1.99
SCN1A-208ENST00000625916 ZNF766Q5HY98 468 aa2.6□□□□□ -1.99
SCN1A-208ENST00000625916 TCTEX1D4Q5JR98 221 aa2.6□□□□□ -1.99
SCN1A-208ENST00000625916 ADAMTSL4-AS1Q5T5F5 129 aa2.6□□□□□ -1.99
SCN1A-208ENST00000625916 ZNF774Q6NX45 483 aa2.6□□□□□ -1.99
SCN1A-208ENST00000625916 ZNF613Q6PF04 617 aa2.6□□□□□ -1.99
SCN1A-208ENST00000625916 CACNA2D4Q7Z3S7 1137 aa2.6□□□□□ -1.99
SCN1A-208ENST00000625916 NRROSQ86YC3 692 aa2.6□□□□□ -1.99
SCN1A-208ENST00000625916 ZNF614Q8N883 585 aa2.6□□□□□ -1.99
SCN1A-208ENST00000625916 APBB2Q92870 758 aa2.6□□□□□ -1.99
SCN1A-208ENST00000625916 PABPC5Q96DU9 382 aaKnown RBP2.6□□□□□ -1.99
SCN1A-208ENST00000625916 OXNAD1Q96HP4 312 aaPredicted RBP2.6□□□□□ -1.99
SCN1A-208ENST00000625916 VEZTQ9HBM0 779 aa2.6□□□□□ -1.99
SCN1A-208ENST00000625916 A4GNTQ9UNA3 340 aa2.6□□□□□ -1.99
SCN1A-208ENST00000625916 RIPOR2Q9Y4F9 1068 aa2.6□□□□□ -1.99
SCN1A-208ENST00000625916 UTYO14607 1347 aa2.6□□□□□ -1.99
SCN1A-208ENST00000625916 H0YIN7 160 aa2.59□□□□□ -1.99
SCN1A-208ENST00000625916 TMEM178BH3BS89 294 aa2.59□□□□□ -1.99
SCN1A-208ENST00000625916 IFNL4K9M1U5 179 aa2.59□□□□□ -1.99
SCN1A-208ENST00000625916 ANKRD28O15084 1053 aa2.59□□□□□ -1.99
SCN1A-208ENST00000625916 IRAK2O43187 625 aa2.59□□□□□ -1.99
SCN1A-208ENST00000625916 DNAH10OSP0CZ25 163 aa2.59□□□□□ -1.99
SCN1A-208ENST00000625916 GATA2P23769 480 aaPredicted RBP2.59□□□□□ -1.99
SCN1A-208ENST00000625916 ELF1P32519 619 aa2.59□□□□□ -1.99
SCN1A-208ENST00000625916 GNAQP50148 359 aa2.59□□□□□ -1.99
SCN1A-208ENST00000625916 MAD2L1Q13257 205 aaPredicted RBP2.59□□□□□ -1.99
SCN1A-208ENST00000625916 PDCD2Q16342 344 aaPredicted RBP2.59□□□□□ -1.99
SCN1A-208ENST00000625916 GTDC1Q4AE62 458 aa2.59□□□□□ -1.99
SCN1A-208ENST00000625916 SUGP1Q8IWZ8 645 aaKnown RBP2.59□□□□□ -1.99
SCN1A-208ENST00000625916 MRGPRDQ8TDS7 321 aa2.59□□□□□ -1.99
SCN1A-208ENST00000625916 PRMT6Q96LA8 375 aaPredicted RBP2.59□□□□□ -1.99
SCN1A-208ENST00000625916 PCGF1Q9BSM1 259 aa2.59□□□□□ -1.99
SCN1A-208ENST00000625916 USP44Q9H0E7 712 aa2.59□□□□□ -1.99
SCN1A-208ENST00000625916 INTS2Q9H0H0 1204 aaKnown RBP2.59□□□□□ -1.99
SCN1A-208ENST00000625916 ZNF700Q9H0M5 742 aa2.59□□□□□ -1.99
SCN1A-208ENST00000625916 SIX2Q9NPC8 291 aa2.59□□□□□ -1.99
SCN1A-208ENST00000625916 SLC38A7Q9NVC3 462 aa2.59□□□□□ -1.99
SCN1A-208ENST00000625916 HCN3Q9P1Z3 774 aa2.59□□□□□ -1.99
SCN1A-208ENST00000625916 CNOT7Q9UIV1 285 aaKnown RBP2.59□□□□□ -1.99
SCN1A-208ENST00000625916 AAR2Q9Y312 384 aaKnown RBP2.59□□□□□ -1.99
SCN1A-208ENST00000625916 SCINQ9Y6U3 715 aa2.59□□□□□ -1.99
SCN1A-208ENST00000625916 AGRNO00468 2067 aa2.58□□□□□ -2
SCN1A-208ENST00000625916 IGLV7-46A0A075B6I9 117 aa2.58□□□□□ -2
SCN1A-208ENST00000625916 A0A0G2JNG1 304 aa2.58□□□□□ -2
SCN1A-208ENST00000625916 MAGEB17A8MXT2 336 aa2.58□□□□□ -2
SCN1A-208ENST00000625916 PRR32B1ATL7 298 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms