RNA–Protein interactions for RNA: ENST00000620254.4

CYFIP2-222, Transcript of cytoplasmic FMR1 interacting protein 2, human

APPRIS P1 TSL 1 (best) BASIC

Gene CYFIP2, Length 4,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CYFIP2-222	ENST00000620254	CAPN7	Q9Y6W3	813 aa		13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	KAT7	O95251	611 aa		13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	APOA4	P06727	396 aa		13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	TCF3	P15923	654 aa		13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	OPRD1	P41143	372 aa		13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	POLR2L	P62875	67 aa	Known RBP	13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	ACOX1	Q15067	660 aa		13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	PDGFRL	Q15198	375 aa		13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	PDCD2	Q16342	344 aa	Predicted RBP	13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	EGFLAM	Q63HQ2	1017 aa		13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	GIMAP7	Q8NHV1	300 aa		13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	PIWIL2	Q8TC59	973 aa	Known RBP	13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	SUSD6	Q92537	303 aa		13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	ECHDC3	Q96DC8	303 aa		13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	ZNF641	Q96N77	438 aa	Predicted RBP	13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	CPEB1	Q9BZB8	566 aa	Known RBP	13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	MID2	Q9UJV3	735 aa		13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	FBXO10	Q9UK96	956 aa		13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	PRR23A	A6NEV1	266 aa		13.15	□□□□□ -0.3
CYFIP2-222	ENST00000620254		A8MT66	165 aa		13.15	□□□□□ -0.3
CYFIP2-222	ENST00000620254	SUPT7L	O94864	414 aa		13.15	□□□□□ -0.3
CYFIP2-222	ENST00000620254	COL6A2	P12110	1019 aa		13.15	□□□□□ -0.3
CYFIP2-222	ENST00000620254	TIMP2	P16035	220 aa		13.15	□□□□□ -0.3
CYFIP2-222	ENST00000620254	GRK2	P25098	689 aa		13.15	□□□□□ -0.3
CYFIP2-222	ENST00000620254	IL12RB1	P42701	662 aa		13.15	□□□□□ -0.3
CYFIP2-222	ENST00000620254	PSMD8	P48556	350 aa		13.15	□□□□□ -0.3
CYFIP2-222	ENST00000620254	CSRP3	P50461	194 aa		13.15	□□□□□ -0.3
CYFIP2-222	ENST00000620254	RCN2	Q14257	317 aa		13.15	□□□□□ -0.3
CYFIP2-222	ENST00000620254	CDKN3	Q16667	212 aa		13.15	□□□□□ -0.3
CYFIP2-222	ENST00000620254	SNX20	Q7Z614	316 aa		13.15	□□□□□ -0.3
CYFIP2-222	ENST00000620254	ISCA2	Q86U28	154 aa		13.15	□□□□□ -0.3
CYFIP2-222	ENST00000620254	WFIKKN2	Q8TEU8	576 aa		13.15	□□□□□ -0.3
CYFIP2-222	ENST00000620254	TMEM237	Q96Q45	408 aa		13.15	□□□□□ -0.3
CYFIP2-222	ENST00000620254	TRMT61B	Q9BVS5	477 aa	Known RBP	13.15	□□□□□ -0.3
CYFIP2-222	ENST00000620254	APPL1	Q9UKG1	709 aa		13.15	□□□□□ -0.3
CYFIP2-222	ENST00000620254	INPP4B	O15327	924 aa		13.15	□□□□□ -0.3
CYFIP2-222	ENST00000620254	PYGL	P06737	847 aa		13.15	□□□□□ -0.3
CYFIP2-222	ENST00000620254	CD1D	P15813	335 aa		13.15	□□□□□ -0.3
CYFIP2-222	ENST00000620254	ARL1	P40616	181 aa	Predicted RBP	13.15	□□□□□ -0.3
CYFIP2-222	ENST00000620254	C2orf27A	Q580R0	203 aa		13.15	□□□□□ -0.3
CYFIP2-222	ENST00000620254	PIWIL4	Q7Z3Z4	852 aa	Known RBP	13.15	□□□□□ -0.3
CYFIP2-222	ENST00000620254	PIP4K2C	Q8TBX8	421 aa		13.15	□□□□□ -0.3
CYFIP2-222	ENST00000620254	UBXN10	Q96LJ8	280 aa		13.15	□□□□□ -0.3
CYFIP2-222	ENST00000620254	RNF112	Q9ULX5	631 aa		13.15	□□□□□ -0.3
CYFIP2-222	ENST00000620254	UPK3BL1	B0FP48	263 aa		13.15	□□□□□ -0.3
CYFIP2-222	ENST00000620254	UPK3BL2	E5RIL1	263 aa		13.15	□□□□□ -0.3
CYFIP2-222	ENST00000620254	SKAP2	O75563	359 aa	Predicted RBP	13.15	□□□□□ -0.3
CYFIP2-222	ENST00000620254	ZNF7	P17097	686 aa	Predicted RBP	13.15	□□□□□ -0.3
CYFIP2-222	ENST00000620254	SCTR	P47872	440 aa		13.15	□□□□□ -0.3
CYFIP2-222	ENST00000620254	POLD2	P49005	469 aa		13.15	□□□□□ -0.3
CYFIP2-222	ENST00000620254	SETMAR	Q53H47	684 aa	Predicted RBP	13.15	□□□□□ -0.3
CYFIP2-222	ENST00000620254	FBXL19	Q6PCT2	694 aa		13.15	□□□□□ -0.3
CYFIP2-222	ENST00000620254	PTGR2	Q8N8N7	351 aa	Predicted RBP	13.15	□□□□□ -0.3
CYFIP2-222	ENST00000620254	TCF12	Q99081	682 aa		13.15	□□□□□ -0.3
CYFIP2-222	ENST00000620254	SLC25A14	O95258	325 aa	Predicted RBP	13.15	□□□□□ -0.31
CYFIP2-222	ENST00000620254	ATP5F1	P24539	256 aa	Predicted RBP	13.15	□□□□□ -0.31
CYFIP2-222	ENST00000620254	CPA2	P48052	419 aa		13.15	□□□□□ -0.31
CYFIP2-222	ENST00000620254	ZNF805	Q5CZA5	627 aa		13.15	□□□□□ -0.31
CYFIP2-222	ENST00000620254	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	13.15	□□□□□ -0.31
CYFIP2-222	ENST00000620254	NMUR2	Q9GZQ4	415 aa		13.15	□□□□□ -0.31
CYFIP2-222	ENST00000620254	MBD1	Q9UIS9	605 aa	Predicted RBP	13.15	□□□□□ -0.31
CYFIP2-222	ENST00000620254	ASL	P04424	464 aa		13.14	□□□□□ -0.31
CYFIP2-222	ENST00000620254	RBP1	P09455	135 aa		13.14	□□□□□ -0.31
CYFIP2-222	ENST00000620254	TIE1	P35590	1138 aa		13.14	□□□□□ -0.31
CYFIP2-222	ENST00000620254	PTGER3	P43115	390 aa		13.14	□□□□□ -0.31
CYFIP2-222	ENST00000620254	ADGRE1	Q14246	886 aa		13.14	□□□□□ -0.31
CYFIP2-222	ENST00000620254	BRAT1	Q6PJG6	821 aa		13.14	□□□□□ -0.31
CYFIP2-222	ENST00000620254	RIOK2	Q9BVS4	552 aa	Known RBP	13.14	□□□□□ -0.31
CYFIP2-222	ENST00000620254	OSBPL1A	Q9BXW6	950 aa		13.14	□□□□□ -0.31
CYFIP2-222	ENST00000620254	NUF2	Q9BZD4	464 aa		13.14	□□□□□ -0.31
CYFIP2-222	ENST00000620254	HAO1	Q9UJM8	370 aa		13.14	□□□□□ -0.31
CYFIP2-222	ENST00000620254	ELFN1	P0C7U0	828 aa		13.14	□□□□□ -0.31
CYFIP2-222	ENST00000620254	AAK1	Q2M2I8	961 aa		13.14	□□□□□ -0.31
CYFIP2-222	ENST00000620254	HSF5	Q4G112	596 aa	Predicted RBP	13.14	□□□□□ -0.31
CYFIP2-222	ENST00000620254	NXN	Q6DKJ4	435 aa		13.14	□□□□□ -0.31
CYFIP2-222	ENST00000620254	RIPOR3	Q96MK2	946 aa		13.14	□□□□□ -0.31
CYFIP2-222	ENST00000620254	TTC1	Q99614	292 aa		13.14	□□□□□ -0.31
CYFIP2-222	ENST00000620254	WDR55	Q9H6Y2	383 aa	Predicted RBP	13.14	□□□□□ -0.31
CYFIP2-222	ENST00000620254	VPS9D1	Q9Y2B5	631 aa		13.14	□□□□□ -0.31
CYFIP2-222	ENST00000620254	SLC27A6	Q9Y2P4	619 aa		13.14	□□□□□ -0.31
CYFIP2-222	ENST00000620254	TCF20	Q9UGU0	1960 aa	Known RBP	13.14	□□□□□ -0.31
CYFIP2-222	ENST00000620254	TARM1	B6A8C7	271 aa		13.14	□□□□□ -0.31
CYFIP2-222	ENST00000620254	MYO1C	O00159	1063 aa		13.14	□□□□□ -0.31
CYFIP2-222	ENST00000620254	DCTN3	O75935	186 aa		13.14	□□□□□ -0.31
CYFIP2-222	ENST00000620254	HOXB8	P17481	243 aa	Predicted RBP	13.14	□□□□□ -0.31
CYFIP2-222	ENST00000620254	SPINT3	P49223	89 aa		13.14	□□□□□ -0.31
CYFIP2-222	ENST00000620254	ACAP2	Q15057	778 aa		13.14	□□□□□ -0.31
CYFIP2-222	ENST00000620254	TRIM74	Q86UV6	250 aa		13.14	□□□□□ -0.31
CYFIP2-222	ENST00000620254	RBFA	Q8N0V3	343 aa		13.14	□□□□□ -0.31
CYFIP2-222	ENST00000620254	BEND7	Q8N7W2	519 aa	Predicted RBP	13.14	□□□□□ -0.31
CYFIP2-222	ENST00000620254	DCBLD1	Q8N8Z6	715 aa		13.14	□□□□□ -0.31
CYFIP2-222	ENST00000620254	CD200R1	Q8TD46	325 aa		13.14	□□□□□ -0.31
CYFIP2-222	ENST00000620254	OR8D1	Q8WZ84	308 aa		13.14	□□□□□ -0.31
CYFIP2-222	ENST00000620254	ZDHHC2	Q9UIJ5	367 aa		13.14	□□□□□ -0.31
CYFIP2-222	ENST00000620254	GON4L	Q3T8J9	2241 aa		13.14	□□□□□ -0.31
CYFIP2-222	ENST00000620254		E9PBE3	544 aa		13.13	□□□□□ -0.31
CYFIP2-222	ENST00000620254		H7C0S8	307 aa		13.13	□□□□□ -0.31
CYFIP2-222	ENST00000620254	FCHO1	O14526	889 aa		13.13	□□□□□ -0.31
CYFIP2-222	ENST00000620254	KLHL41	O60662	606 aa		13.13	□□□□□ -0.31
CYFIP2-222	ENST00000620254	GUCA1C	O95843	209 aa		13.13	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms