RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 USP51Q70EK9 711 aa20.27■□□□□ 0.84
NEK3-208ENST00000618534 SPATA19Q7Z5L4 167 aa20.27■□□□□ 0.84
NEK3-208ENST00000618534 RBM12BQ8IXT5 1001 aaKnown RBP20.27■□□□□ 0.84
NEK3-208ENST00000618534 TBC1D15Q8TC07 691 aa20.27■□□□□ 0.84
NEK3-208ENST00000618534 RSPH1Q8WYR4 309 aa20.27■□□□□ 0.84
NEK3-208ENST00000618534 C1orf50Q9BV19 199 aa20.27■□□□□ 0.84
NEK3-208ENST00000618534 PAIP1Q9H074 479 aaKnown RBP20.27■□□□□ 0.84
NEK3-208ENST00000618534 INTS7Q9NVH2 962 aaKnown RBP20.27■□□□□ 0.84
NEK3-208ENST00000618534 TBCCD1Q9NVR7 557 aa20.27■□□□□ 0.84
NEK3-208ENST00000618534 CLEC11AQ9Y240 323 aa20.27■□□□□ 0.84
NEK3-208ENST00000618534 FAM50BQ9Y247 325 aa20.27■□□□□ 0.84
NEK3-208ENST00000618534 TLR6Q9Y2C9 796 aa20.27■□□□□ 0.84
NEK3-208ENST00000618534 EEDO75530 441 aaKnown RBP20.26■□□□□ 0.83
NEK3-208ENST00000618534 C1RP00736 705 aa20.26■□□□□ 0.83
NEK3-208ENST00000618534 HOXB8P17481 243 aaPredicted RBP20.26■□□□□ 0.83
NEK3-208ENST00000618534 HRH2P25021 359 aa20.26■□□□□ 0.83
NEK3-208ENST00000618534 MAPRE1Q15691 268 aaKnown RBP20.26■□□□□ 0.83
NEK3-208ENST00000618534 TIGD2Q4W5G0 525 aa20.26■□□□□ 0.83
NEK3-208ENST00000618534 TAF2Q6P1X5 1199 aa20.26■□□□□ 0.83
NEK3-208ENST00000618534 PAQR3Q6TCH7 311 aa20.26■□□□□ 0.83
NEK3-208ENST00000618534 ANKRD23Q86SG2 305 aa20.26■□□□□ 0.83
NEK3-208ENST00000618534 COLGALT2Q8IYK4 626 aa20.26■□□□□ 0.83
NEK3-208ENST00000618534 TSPEARQ8WU66 669 aa20.26■□□□□ 0.83
NEK3-208ENST00000618534 KIAA1191Q96A73 305 aa20.26■□□□□ 0.83
NEK3-208ENST00000618534 SLC39A13Q96H72 371 aa20.26■□□□□ 0.83
NEK3-208ENST00000618534 KATNAL1Q9BW62 490 aa20.26■□□□□ 0.83
NEK3-208ENST00000618534 UBA6A0AVT1 1052 aaPredicted RBP20.26■□□□□ 0.83
NEK3-208ENST00000618534 CCDC154A6NI56 674 aa20.26■□□□□ 0.83
NEK3-208ENST00000618534 M0QZQ0 153 aa20.26■□□□□ 0.83
NEK3-208ENST00000618534 ECI2O75521 394 aa20.26■□□□□ 0.83
NEK3-208ENST00000618534 STC1P52823 247 aa20.26■□□□□ 0.83
NEK3-208ENST00000618534 ADARB1P78563 741 aaKnown RBP20.26■□□□□ 0.83
NEK3-208ENST00000618534 POLD3Q15054 466 aaPredicted RBP20.26■□□□□ 0.83
NEK3-208ENST00000618534 TSNQ15631 228 aaKnown RBP20.26■□□□□ 0.83
NEK3-208ENST00000618534 ANKS6Q68DC2 871 aa20.26■□□□□ 0.83
NEK3-208ENST00000618534 XKR5Q6UX68 686 aa20.26■□□□□ 0.83
NEK3-208ENST00000618534 CIR1Q86X95 450 aaPredicted RBP20.26■□□□□ 0.83
NEK3-208ENST00000618534 OR4L1Q8NH43 312 aa20.26■□□□□ 0.83
NEK3-208ENST00000618534 STAG3L4Q8TBR4 150 aa20.26■□□□□ 0.83
NEK3-208ENST00000618534 GIPC3Q8TF64 312 aa20.26■□□□□ 0.83
NEK3-208ENST00000618534 BIRC7Q96CA5 298 aa20.26■□□□□ 0.83
NEK3-208ENST00000618534 PKD2L2Q9NZM6 624 aa20.26■□□□□ 0.83
NEK3-208ENST00000618534 DOCK3Q8IZD9 2030 aa20.25■□□□□ 0.83
NEK3-208ENST00000618534 NCF1BA6NI72 391 aaPredicted RBP20.25■□□□□ 0.83
NEK3-208ENST00000618534 NCF1CA8MVU1 366 aaPredicted RBP20.25■□□□□ 0.83
NEK3-208ENST00000618534 MUSKO15146 869 aa20.25■□□□□ 0.83
NEK3-208ENST00000618534 RHOBTB1O94844 696 aa20.25■□□□□ 0.83
NEK3-208ENST00000618534 RPS17P08708 135 aaKnown RBP20.25■□□□□ 0.83
NEK3-208ENST00000618534 NCF1P14598 390 aaPredicted RBP20.25■□□□□ 0.83
NEK3-208ENST00000618534 AGTR2P50052 363 aa20.25■□□□□ 0.83
NEK3-208ENST00000618534 TBX4P57082 545 aa20.25■□□□□ 0.83
NEK3-208ENST00000618534 EEFSECP57772 596 aaKnown RBP20.25■□□□□ 0.83
NEK3-208ENST00000618534 SETMARQ53H47 684 aaPredicted RBP20.25■□□□□ 0.83
NEK3-208ENST00000618534 NANOGP8Q6NSW7 305 aa20.25■□□□□ 0.83
NEK3-208ENST00000618534 SYVN1Q86TM6 617 aa20.25■□□□□ 0.83
NEK3-208ENST00000618534 THEM5Q8N1Q8 247 aa20.25■□□□□ 0.83
NEK3-208ENST00000618534 TMEM199Q8N511 208 aa20.25■□□□□ 0.83
NEK3-208ENST00000618534 IGSF8Q969P0 613 aa20.25■□□□□ 0.83
NEK3-208ENST00000618534 AP5M1Q9H0R1 490 aa20.25■□□□□ 0.83
NEK3-208ENST00000618534 ZNF408Q9H9D4 720 aa20.25■□□□□ 0.83
NEK3-208ENST00000618534 NANOGQ9H9S0 305 aa20.25■□□□□ 0.83
NEK3-208ENST00000618534 IFT80Q9P2H3 777 aaPredicted RBP20.25■□□□□ 0.83
NEK3-208ENST00000618534 ZNF639Q9UID6 485 aa20.25■□□□□ 0.83
NEK3-208ENST00000618534 CDC7O00311 574 aa20.25■□□□□ 0.83
NEK3-208ENST00000618534 SLC22A3O75751 556 aa20.25■□□□□ 0.83
NEK3-208ENST00000618534 UMPSP11172 480 aa20.25■□□□□ 0.83
NEK3-208ENST00000618534 POLR2IP36954 125 aaKnown RBP20.25■□□□□ 0.83
NEK3-208ENST00000618534 MAPK10P53779 464 aa20.25■□□□□ 0.83
NEK3-208ENST00000618534 ACBD5Q5T8D3 534 aaPredicted RBP20.25■□□□□ 0.83
NEK3-208ENST00000618534 TRIM74Q86UV6 250 aa20.25■□□□□ 0.83
NEK3-208ENST00000618534 TRIM73Q86UV7 250 aa20.25■□□□□ 0.83
NEK3-208ENST00000618534 OR2T11Q8NH01 316 aa20.25■□□□□ 0.83
NEK3-208ENST00000618534 CHID1Q9BWS9 393 aa20.25■□□□□ 0.83
NEK3-208ENST00000618534 TBC1D23Q9NUY8 699 aa20.25■□□□□ 0.83
NEK3-208ENST00000618534 LEF1Q9UJU2 399 aaPredicted RBP20.25■□□□□ 0.83
NEK3-208ENST00000618534 ZNF225Q9UK10 706 aa20.25■□□□□ 0.83
NEK3-208ENST00000618534 MED16Q9Y2X0 877 aa20.25■□□□□ 0.83
NEK3-208ENST00000618534 ANKRD36A6QL64 1941 aa20.25■□□□□ 0.83
NEK3-208ENST00000618534 HLCSP50747 726 aa20.24■□□□□ 0.83
NEK3-208ENST00000618534 POLR2JP52435 117 aaKnown RBP20.24■□□□□ 0.83
NEK3-208ENST00000618534 OR4D2P58180 307 aa20.24■□□□□ 0.83
NEK3-208ENST00000618534 NAA20P61599 178 aa20.24■□□□□ 0.83
NEK3-208ENST00000618534 PURAQ00577 322 aaKnown RBP20.24■□□□□ 0.83
NEK3-208ENST00000618534 BNIP3Q12983 259 aa20.24■□□□□ 0.83
NEK3-208ENST00000618534 FAM110CQ1W6H9 321 aa20.24■□□□□ 0.83
NEK3-208ENST00000618534 AASDHQ4L235 1098 aaPredicted RBP20.24■□□□□ 0.83
NEK3-208ENST00000618534 XKR7Q5GH72 579 aa20.24■□□□□ 0.83
NEK3-208ENST00000618534 OTUD3Q5T2D3 398 aaPredicted RBP20.24■□□□□ 0.83
NEK3-208ENST00000618534 CCNYL2Q5T2Q4 361 aa20.24■□□□□ 0.83
NEK3-208ENST00000618534 OSCP1Q8WVF1 389 aa20.24■□□□□ 0.83
NEK3-208ENST00000618534 RNF145Q96MT1 663 aa20.24■□□□□ 0.83
NEK3-208ENST00000618534 ZNF599Q96NL3 588 aa20.24■□□□□ 0.83
NEK3-208ENST00000618534 ACOX2Q99424 681 aa20.24■□□□□ 0.83
NEK3-208ENST00000618534 DERL2Q9GZP9 239 aa20.24■□□□□ 0.83
NEK3-208ENST00000618534 ANKRD12Q6UB98 2062 aa20.24■□□□□ 0.83
NEK3-208ENST00000618534 KANSL1LA0AUZ9 987 aa20.24■□□□□ 0.83
NEK3-208ENST00000618534 NPEPPSL1A6NEC2 478 aa20.24■□□□□ 0.83
NEK3-208ENST00000618534 H0Y858 1186 aa20.24■□□□□ 0.83
NEK3-208ENST00000618534 B4GAT1O43505 415 aa20.24■□□□□ 0.83
NEK3-208ENST00000618534 CHRNA1P02708 482 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms