RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 WDR87Q6ZQQ6 2873 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 KPNA3O00505 521 aaPredicted RBP5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 PPP6CO00743 305 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 LSM1O15116 133 aaKnown RBP5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 ADCY6O43306 1168 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 RECQL5O94762 991 aaPredicted RBP5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 PRAMEF1O95521 474 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 S1PR4O95977 384 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 GSNP06396 782 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 UGT1A6P19224 532 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 UGT1A1P22309 533 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 UGT1A4P22310 534 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 UGT1A3P35503 534 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 UGT1A5P35504 534 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 MAGEA11P43364 429 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 HSPA7P48741 367 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 HERVK_113P63132 956 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 ADAM17P78536 824 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 ADGRE1Q14246 886 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 C16orf72Q14CZ0 275 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 PLCL1Q15111 1095 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 ZNF284Q2VY69 593 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 TECRLQ5HYJ1 363 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 KIAA0319Q5VV43 1072 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 GLYATQ6IB77 296 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 DENND5AQ6IQ26 1287 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 TMEM214Q6NUQ4 689 aaKnown RBP5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 SYTL1Q8IYJ3 562 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 TBC1D21Q8IYX1 336 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 TTC9BQ8N6N2 239 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 TNIP2Q8NFZ5 429 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 LRTOMTQ8WZ04 291 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 PEX13Q92968 403 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 FAM162AQ96A26 154 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 ERVK-6Q9BXR3 956 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 KATNBL1Q9H079 304 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 NSUN3Q9H649 340 aaKnown RBP5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 COQ10BQ9H8M1 238 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 LMCD1Q9NZU5 365 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 ILVBLA1L0T0 632 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 DYTNA2CJ06 578 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 LRG1P02750 347 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 UGT2B4P06133 528 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 PABPC4LP0CB38 370 aaKnown RBP5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 GPR15P49685 360 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 PPP1R8Q12972 351 aaKnown RBP5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 IKBKEQ14164 716 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 KCTD11Q693B1 232 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 GCNT7Q6ZNI0 430 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 CLEC14AQ86T13 490 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 HJURPQ8NCD3 748 aaPredicted RBP5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 C2CD4AQ8NCU7 369 aaPredicted RBP5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 B4GALNT2Q8NHY0 566 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 SNRNP27Q8WVK2 155 aaKnown RBP5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 GATA6Q92908 595 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 KIAA1191Q96A73 305 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 SH3KBP1Q96B97 665 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 DTNBP1Q96EV8 351 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 CENPNQ96H22 339 aaPredicted RBP5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 APOLD1Q96LR9 279 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 CHID1Q9BWS9 393 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 TFB2MQ9H5Q4 396 aaKnown RBP5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 TBC1D23Q9NUY8 699 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 SRRDQ9UH36 339 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 FAM32AQ9Y421 112 aaKnown RBP5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 BBIP1A8MTZ0 92 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 ENPP3O14638 875 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 TMCC1O94876 653 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 IGSF6O95976 241 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 COL6A1P12109 1028 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 GNAZP19086 355 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 DNAJB1P25685 340 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 RANBP1P43487 201 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 SIRPB2Q5JXA9 342 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 C6orf52Q5T4I8 152 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 TXNDC11Q6PKC3 985 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 ALKAL1Q6UXT8 129 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 SLC15A3Q8IY34 581 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 LEMD2Q8NC56 503 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 FBXO22Q8NEZ5 403 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 NRG4Q8WWG1 115 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 KCNJ9Q92806 393 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 GFM2Q969S9 779 aaKnown RBP5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 C1orf74Q96LT6 269 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 OLFM1Q99784 485 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 PKP2Q99959 881 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 ADI1Q9BV57 179 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 SPATA16Q9BXB7 569 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 C3orf18Q9UK00 162 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 ADAMTS6Q9UKP5 1117 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 TRIM17Q9Y577 477 aa5.6□□□□□ -1.51
SYNCRIP-204ENST00000616122 PRORSD1PA6NEY8 169 aa5.59□□□□□ -1.51
SYNCRIP-204ENST00000616122 TRMUO75648 421 aaKnown RBP5.59□□□□□ -1.51
SYNCRIP-204ENST00000616122 SLC25A14O95258 325 aaPredicted RBP5.59□□□□□ -1.51
SYNCRIP-204ENST00000616122 ITGBL1O95965 494 aaPredicted RBP5.59□□□□□ -1.51
SYNCRIP-204ENST00000616122 LINGO3P0C6S8 592 aa5.59□□□□□ -1.51
SYNCRIP-204ENST00000616122 SLC6A2P23975 617 aa5.59□□□□□ -1.51
SYNCRIP-204ENST00000616122 GABRR2P28476 465 aa5.59□□□□□ -1.51
SYNCRIP-204ENST00000616122 CLK1P49759 484 aaKnown RBP5.59□□□□□ -1.51
SYNCRIP-204ENST00000616122 AP1S1P61966 158 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms