RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 NAA20P61599 178 aa27.83■■■□□ 2.05
CSPG5-205ENST00000610462 PLEKHG6Q3KR16 790 aa27.83■■■□□ 2.05
CSPG5-205ENST00000610462 PIGGQ5H8A4 983 aa27.83■■■□□ 2.05
CSPG5-205ENST00000610462 ANKS6Q68DC2 871 aa27.83■■■□□ 2.05
CSPG5-205ENST00000610462 UGT3A1Q6NUS8 523 aa27.83■■■□□ 2.05
CSPG5-205ENST00000610462 CERS6Q6ZMG9 384 aa27.83■■■□□ 2.05
CSPG5-205ENST00000610462 EEF1AKMT1Q8WVE0 214 aa27.83■■■□□ 2.05
CSPG5-205ENST00000610462 LINGO1Q96FE5 620 aa27.83■■■□□ 2.05
CSPG5-205ENST00000610462 C3orf30Q96M34 536 aa27.83■■■□□ 2.05
CSPG5-205ENST00000610462 NPAS2Q99743 824 aa27.83■■■□□ 2.05
CSPG5-205ENST00000610462 UTP6Q9NYH9 597 aaKnown RBP27.83■■■□□ 2.05
CSPG5-205ENST00000610462 A0A0J9YYE9 177 aa27.83■■■□□ 2.05
CSPG5-205ENST00000610462 SOCS5O75159 536 aa27.83■■■□□ 2.05
CSPG5-205ENST00000610462 TRBC1P01850 177 aa27.83■■■□□ 2.05
CSPG5-205ENST00000610462 RPS17P08708 135 aaKnown RBP27.83■■■□□ 2.05
CSPG5-205ENST00000610462 PFKLP17858 780 aa27.83■■■□□ 2.05
CSPG5-205ENST00000610462 LCP2Q13094 533 aa27.83■■■□□ 2.05
CSPG5-205ENST00000610462 STX5Q13190 355 aa27.83■■■□□ 2.05
CSPG5-205ENST00000610462 EML3Q32P44 896 aa27.83■■■□□ 2.05
CSPG5-205ENST00000610462 TRIM68Q6AZZ1 485 aa27.83■■■□□ 2.05
CSPG5-205ENST00000610462 C19orf43Q9BQ61 176 aa27.83■■■□□ 2.05
CSPG5-205ENST00000610462 C1QTNF3Q9BXJ4 246 aa27.83■■■□□ 2.05
CSPG5-205ENST00000610462 MRPL1Q9BYD6 325 aaKnown RBP27.83■■■□□ 2.05
CSPG5-205ENST00000610462 TMCO1Q9UM00 188 aa27.83■■■□□ 2.05
CSPG5-205ENST00000610462 PCDHB1Q9Y5F3 818 aa27.83■■■□□ 2.05
CSPG5-205ENST00000610462 IGSF6O95976 241 aa27.82■■■□□ 2.04
CSPG5-205ENST00000610462 ZNF423Q2M1K9 1284 aa27.82■■■□□ 2.04
CSPG5-205ENST00000610462 AGKQ53H12 422 aa27.82■■■□□ 2.04
CSPG5-205ENST00000610462 TXNDC11Q6PKC3 985 aa27.82■■■□□ 2.04
CSPG5-205ENST00000610462 KLHL23Q8NBE8 558 aa27.82■■■□□ 2.04
CSPG5-205ENST00000610462 TWIST2Q8WVJ9 160 aa27.82■■■□□ 2.04
CSPG5-205ENST00000610462 CORO1BQ9BR76 489 aa27.82■■■□□ 2.04
CSPG5-205ENST00000610462 SLC46A2Q9BY10 475 aa27.82■■■□□ 2.04
CSPG5-205ENST00000610462 ZFYVE1Q9HBF4 777 aa27.82■■■□□ 2.04
CSPG5-205ENST00000610462 ATP6AP2A0A1C7CYW4 349 aa27.82■■■□□ 2.04
CSPG5-205ENST00000610462 CFLARO15519 480 aa27.82■■■□□ 2.04
CSPG5-205ENST00000610462 GPR39O43194 453 aa27.82■■■□□ 2.04
CSPG5-205ENST00000610462 ATP6AP2O75787 350 aa27.82■■■□□ 2.04
CSPG5-205ENST00000610462 GEN1Q17RS7 908 aa27.82■■■□□ 2.04
CSPG5-205ENST00000610462 CPNE9Q8IYJ1 553 aa27.82■■■□□ 2.04
CSPG5-205ENST00000610462 PACSIN3Q9UKS6 424 aa27.82■■■□□ 2.04
CSPG5-205ENST00000610462 INTS6Q9UL03 887 aaKnown RBP27.82■■■□□ 2.04
CSPG5-205ENST00000610462 PRMT5O14744 637 aaPredicted RBP27.81■■■□□ 2.04
CSPG5-205ENST00000610462 ZNF821O75541 412 aaPredicted RBP27.81■■■□□ 2.04
CSPG5-205ENST00000610462 CLCN7P51798 805 aa27.81■■■□□ 2.04
CSPG5-205ENST00000610462 THOP1P52888 689 aa27.81■■■□□ 2.04
CSPG5-205ENST00000610462 FOXA1P55317 472 aa27.81■■■□□ 2.04
CSPG5-205ENST00000610462 KBTBD6Q86V97 674 aa27.81■■■□□ 2.04
CSPG5-205ENST00000610462 ATP13A3Q9H7F0 1226 aa27.81■■■□□ 2.04
CSPG5-205ENST00000610462 AKTIPQ9H8T0 292 aa27.81■■■□□ 2.04
CSPG5-205ENST00000610462 ASAH2Q9NR71 780 aa27.81■■■□□ 2.04
CSPG5-205ENST00000610462 MTCL1Q9Y4B5 1905 aaKnown RBP27.8■■■□□ 2.04
CSPG5-205ENST00000610462 CYBBP04839 570 aa27.8■■■□□ 2.04
CSPG5-205ENST00000610462 GKP32189 559 aa27.8■■■□□ 2.04
CSPG5-205ENST00000610462 DPP6P42658 865 aa27.8■■■□□ 2.04
CSPG5-205ENST00000610462 HTRA4P83105 476 aaPredicted RBP27.8■■■□□ 2.04
CSPG5-205ENST00000610462 HIPK4Q8NE63 616 aa27.8■■■□□ 2.04
CSPG5-205ENST00000610462 GRIN3AQ8TCU5 1115 aa27.8■■■□□ 2.04
CSPG5-205ENST00000610462 TNKS2Q9H2K2 1166 aa27.8■■■□□ 2.04
CSPG5-205ENST00000610462 IL23AQ9NPF7 189 aa27.8■■■□□ 2.04
CSPG5-205ENST00000610462 BATF3Q9NR55 127 aa27.8■■■□□ 2.04
CSPG5-205ENST00000610462 DHRS7Q9Y394 339 aa27.8■■■□□ 2.04
CSPG5-205ENST00000610462 C1orf232A0A0U1RR37 186 aa27.8■■■□□ 2.04
CSPG5-205ENST00000610462 GOLGA8CPA6NN73 597 aa27.8■■■□□ 2.04
CSPG5-205ENST00000610462 GAPDHSO14556 408 aaPredicted RBP27.8■■■□□ 2.04
CSPG5-205ENST00000610462 CDKN3Q16667 212 aa27.8■■■□□ 2.04
CSPG5-205ENST00000610462 DGKKQ5KSL6 1271 aa27.8■■■□□ 2.04
CSPG5-205ENST00000610462 FAM151BQ6UXP7 276 aa27.8■■■□□ 2.04
CSPG5-205ENST00000610462 DHDDSQ86SQ9 333 aa27.8■■■□□ 2.04
CSPG5-205ENST00000610462 GPSM1Q86YR5 675 aa27.8■■■□□ 2.04
CSPG5-205ENST00000610462 PAF1Q8N7H5 531 aa27.8■■■□□ 2.04
CSPG5-205ENST00000610462 ZNF784Q8NCA9 323 aaPredicted RBP27.8■■■□□ 2.04
CSPG5-205ENST00000610462 ZNF483Q8TF39 744 aaPredicted RBP27.8■■■□□ 2.04
CSPG5-205ENST00000610462 LMLNQ96KR4 655 aa27.8■■■□□ 2.04
CSPG5-205ENST00000610462 SARS2Q9NP81 518 aaKnown RBP27.8■■■□□ 2.04
CSPG5-205ENST00000610462 SEMA4BQ9NPR2 832 aaPredicted RBP27.8■■■□□ 2.04
CSPG5-205ENST00000610462 CCDC167Q9P0B6 97 aa27.8■■■□□ 2.04
CSPG5-205ENST00000610462 ZBBXA8MT70 800 aa27.79■■■□□ 2.04
CSPG5-205ENST00000610462 PIP5K1BO14986 540 aa27.79■■■□□ 2.04
CSPG5-205ENST00000610462 PRAMEF1O95521 474 aa27.79■■■□□ 2.04
CSPG5-205ENST00000610462 SNRPB2P08579 225 aaKnown RBP27.79■■■□□ 2.04
CSPG5-205ENST00000610462 HNF1BP35680 557 aa27.79■■■□□ 2.04
CSPG5-205ENST00000610462 CEACAM7Q14002 265 aa27.79■■■□□ 2.04
CSPG5-205ENST00000610462 SERPINA9Q86WD7 417 aa27.79■■■□□ 2.04
CSPG5-205ENST00000610462 KBTBD2Q8IY47 623 aa27.79■■■□□ 2.04
CSPG5-205ENST00000610462 CLP1Q92989 425 aaKnown RBP27.79■■■□□ 2.04
CSPG5-205ENST00000610462 PDLIM5Q96HC4 596 aaKnown RBP27.79■■■□□ 2.04
CSPG5-205ENST00000610462 ZNF184Q99676 751 aaPredicted RBP27.79■■■□□ 2.04
CSPG5-205ENST00000610462 SMG9Q9H0W8 520 aaKnown RBP27.79■■■□□ 2.04
CSPG5-205ENST00000610462 FBRSL1Q9HCM7 1045 aaKnown RBP27.79■■■□□ 2.04
CSPG5-205ENST00000610462 CXorf51AA0A1B0GTR3 108 aa27.79■■■□□ 2.04
CSPG5-205ENST00000610462 IQCF5A8MTL0 148 aa27.79■■■□□ 2.04
CSPG5-205ENST00000610462 CCL16O15467 120 aa27.79■■■□□ 2.04
CSPG5-205ENST00000610462 ALDOCP09972 364 aaKnown RBP27.79■■■□□ 2.04
CSPG5-205ENST00000610462 HK3P52790 923 aa27.79■■■□□ 2.04
CSPG5-205ENST00000610462 PKNOX1P55347 436 aa27.79■■■□□ 2.04
CSPG5-205ENST00000610462 RNF111Q6ZNA4 994 aa27.79■■■□□ 2.04
CSPG5-205ENST00000610462 OR2AP1Q8NGE2 309 aa27.79■■■□□ 2.04
CSPG5-205ENST00000610462 SLC22A17Q8WUG5 538 aa27.79■■■□□ 2.04
CSPG5-205ENST00000610462 KCNA7Q96RP8 456 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms