RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 SYPP08247 313 aa10.03□□□□□ -0.8
UPF1-213ENST00000601981 SNRPAP09012 282 aaKnown RBP10.03□□□□□ -0.8
UPF1-213ENST00000601981 LHCGRP22888 699 aa10.03□□□□□ -0.8
UPF1-213ENST00000601981 CHRNA4P43681 627 aa10.03□□□□□ -0.8
UPF1-213ENST00000601981 RABIFP47224 123 aa10.03□□□□□ -0.8
UPF1-213ENST00000601981 STC1P52823 247 aa10.03□□□□□ -0.8
UPF1-213ENST00000601981 SEMG2Q02383 582 aa10.03□□□□□ -0.8
UPF1-213ENST00000601981 ANKRD20A4Q4UJ75 823 aa10.03□□□□□ -0.8
UPF1-213ENST00000601981 TRIM61Q5EBN2 209 aa10.03□□□□□ -0.8
UPF1-213ENST00000601981 PCID2Q5JVF3 399 aa10.03□□□□□ -0.8
UPF1-213ENST00000601981 CERCAMQ5T4B2 595 aa10.03□□□□□ -0.8
UPF1-213ENST00000601981 SLC23A3Q6PIS1 610 aa10.03□□□□□ -0.8
UPF1-213ENST00000601981 IL27RAQ6UWB1 636 aa10.03□□□□□ -0.8
UPF1-213ENST00000601981 ZNF765Q7L2R6 523 aa10.03□□□□□ -0.8
UPF1-213ENST00000601981 LYSMD3Q7Z3D4 306 aa10.03□□□□□ -0.8
UPF1-213ENST00000601981 PTAR1Q7Z6K3 402 aaPredicted RBP10.03□□□□□ -0.8
UPF1-213ENST00000601981 TSPAN33Q86UF1 283 aa10.03□□□□□ -0.8
UPF1-213ENST00000601981 MFSD2AQ8NA29 543 aa10.03□□□□□ -0.8
UPF1-213ENST00000601981 PPHLN1Q8NEY8 458 aaKnown RBP10.03□□□□□ -0.8
UPF1-213ENST00000601981 MDM1Q8TC05 714 aa10.03□□□□□ -0.8
UPF1-213ENST00000601981 TMEM131Q92545 1883 aa10.03□□□□□ -0.8
UPF1-213ENST00000601981 ZNF669Q96BR6 464 aaPredicted RBP10.03□□□□□ -0.8
UPF1-213ENST00000601981 DTD2Q96FN9 168 aa10.03□□□□□ -0.8
UPF1-213ENST00000601981 CERS2Q96G23 380 aa10.03□□□□□ -0.8
UPF1-213ENST00000601981 SGSM3Q96HU1 749 aa10.03□□□□□ -0.8
UPF1-213ENST00000601981 COQ10AQ96MF6 247 aa10.03□□□□□ -0.8
UPF1-213ENST00000601981 SLC6A18Q96N87 628 aa10.03□□□□□ -0.8
UPF1-213ENST00000601981 RANBP9Q96S59 729 aa10.03□□□□□ -0.8
UPF1-213ENST00000601981 APOL2Q9BQE5 337 aa10.03□□□□□ -0.8
UPF1-213ENST00000601981 TRIM56Q9BRZ2 755 aaKnown RBP10.03□□□□□ -0.8
UPF1-213ENST00000601981 ZDHHC5Q9C0B5 715 aa10.03□□□□□ -0.8
UPF1-213ENST00000601981 EPN3Q9H201 632 aa10.03□□□□□ -0.8
UPF1-213ENST00000601981 CCDC134Q9H6E4 229 aa10.03□□□□□ -0.8
UPF1-213ENST00000601981 NKIRAS1Q9NYS0 192 aa10.03□□□□□ -0.8
UPF1-213ENST00000601981 SLC6A14Q9UN76 642 aa10.03□□□□□ -0.8
UPF1-213ENST00000601981 COQ6Q9Y2Z9 468 aa10.03□□□□□ -0.8
UPF1-213ENST00000601981 TCAF1Q9Y4C2 921 aa10.03□□□□□ -0.8
UPF1-213ENST00000601981 TDRD6O60522 2096 aaKnown RBP10.03□□□□□ -0.8
UPF1-213ENST00000601981 OTOGLQ3ZCN5 2332 aa10.02□□□□□ -0.8
UPF1-213ENST00000601981 ZCWPW2A0A1B0GU75 182 aa10.02□□□□□ -0.81
UPF1-213ENST00000601981 C10orf142B7Z368 130 aa10.02□□□□□ -0.81
UPF1-213ENST00000601981 VILLO15195 856 aa10.02□□□□□ -0.81
UPF1-213ENST00000601981 STX7O15400 261 aaKnown RBP10.02□□□□□ -0.81
UPF1-213ENST00000601981 MT-ND3P03897 115 aa10.02□□□□□ -0.81
UPF1-213ENST00000601981 PCCBP05166 539 aa10.02□□□□□ -0.81
UPF1-213ENST00000601981 ZNF806P0C7X5 589 aa10.02□□□□□ -0.81
UPF1-213ENST00000601981 PIRTP0C851 137 aa10.02□□□□□ -0.81
UPF1-213ENST00000601981 CREB1P16220 341 aa10.02□□□□□ -0.81
UPF1-213ENST00000601981 LPOP22079 712 aaPredicted RBP10.02□□□□□ -0.81
UPF1-213ENST00000601981 KELP23276 732 aa10.02□□□□□ -0.81
UPF1-213ENST00000601981 HTR1BP28222 390 aa10.02□□□□□ -0.81
UPF1-213ENST00000601981 HMGCLP35914 325 aa10.02□□□□□ -0.81
UPF1-213ENST00000601981 HADHAP40939 763 aa10.02□□□□□ -0.81
UPF1-213ENST00000601981 ETV3P41162 512 aa10.02□□□□□ -0.81
UPF1-213ENST00000601981 THOP1P52888 689 aa10.02□□□□□ -0.81
UPF1-213ENST00000601981 ATXN3P54252 364 aaPredicted RBP10.02□□□□□ -0.81
UPF1-213ENST00000601981 YPEL5P62699 121 aa10.02□□□□□ -0.81
UPF1-213ENST00000601981 PTSQ03393 145 aa10.02□□□□□ -0.81
UPF1-213ENST00000601981 DNAJC3Q13217 504 aa10.02□□□□□ -0.81
UPF1-213ENST00000601981 SEPT6Q14141 434 aa10.02□□□□□ -0.81
UPF1-213ENST00000601981 PTK2BQ14289 1009 aa10.02□□□□□ -0.81
UPF1-213ENST00000601981 IRF4Q15306 451 aa10.02□□□□□ -0.81
UPF1-213ENST00000601981 TAF1AQ15573 450 aaPredicted RBP10.02□□□□□ -0.81
UPF1-213ENST00000601981 PDPK2PQ6A1A2 396 aa10.02□□□□□ -0.81
UPF1-213ENST00000601981 TTC19Q6DKK2 380 aaPredicted RBP10.02□□□□□ -0.81
UPF1-213ENST00000601981 RAET1GQ6H3X3 334 aa10.02□□□□□ -0.81
UPF1-213ENST00000601981 ESRP1Q6NXG1 681 aaKnown RBP10.02□□□□□ -0.81
UPF1-213ENST00000601981 KYAT3Q6YP21 454 aaKnown RBP10.02□□□□□ -0.81
UPF1-213ENST00000601981 NLRP9Q7RTR0 991 aa10.02□□□□□ -0.81
UPF1-213ENST00000601981 HSD11B1LQ7Z5J1 315 aa10.02□□□□□ -0.81
UPF1-213ENST00000601981 OXR1Q8N573 874 aa10.02□□□□□ -0.81
UPF1-213ENST00000601981 TMEM145Q8NBT3 493 aa10.02□□□□□ -0.81
UPF1-213ENST00000601981 BRSK1Q8TDC3 778 aa10.02□□□□□ -0.81
UPF1-213ENST00000601981 AP2M1Q96CW1 435 aa10.02□□□□□ -0.81
UPF1-213ENST00000601981 KLHDC7BQ96G42 594 aa10.02□□□□□ -0.81
UPF1-213ENST00000601981 FCRL3Q96P31 734 aaPredicted RBP10.02□□□□□ -0.81
UPF1-213ENST00000601981 CPNE1Q99829 537 aa10.02□□□□□ -0.81
UPF1-213ENST00000601981 MYOCQ99972 504 aa10.02□□□□□ -0.81
UPF1-213ENST00000601981 C19orf43Q9BQ61 176 aa10.02□□□□□ -0.81
UPF1-213ENST00000601981 KCNK9Q9NPC2 374 aa10.02□□□□□ -0.81
UPF1-213ENST00000601981 FZD3Q9NPG1 666 aa10.02□□□□□ -0.81
UPF1-213ENST00000601981 NSMCE4AQ9NXX6 385 aa10.02□□□□□ -0.81
UPF1-213ENST00000601981 ZFATQ9P243 1243 aa10.02□□□□□ -0.81
UPF1-213ENST00000601981 KNL1Q8NG31 2342 aa10.02□□□□□ -0.81
UPF1-213ENST00000601981 FAM186AA6NE01 2351 aa10.02□□□□□ -0.81
UPF1-213ENST00000601981 A0A1W2PPM1 405 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 HEATR9A2RTY3 570 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 FOXO6A8MYZ6 492 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 TRIM49D1C9J1S8 452 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 CACNB4O00305 520 aaPredicted RBP10.01□□□□□ -0.81
UPF1-213ENST00000601981 TYROBPO43914 113 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 DFNA5O60443 496 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 PIAS1O75925 651 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 ZWINTO95229 277 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 CER1O95813 267 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 C1SP09871 688 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 THEGLP0DJG4 465 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 TPH1P17752 444 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 KRT4P19013 534 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 ADRA1DP25100 572 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms