RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 CSTF2P33240 577 aaKnown RBP eCLIP14.19□□□□□ -0.14
VMP1-206ENST00000587945 CYP4F2P78329 520 aa14.19□□□□□ -0.14
VMP1-206ENST00000587945 GPLD1P80108 840 aa14.19□□□□□ -0.14
VMP1-206ENST00000587945 HHEXQ03014 270 aa14.19□□□□□ -0.14
VMP1-206ENST00000587945 TRA2AQ13595 282 aaKnown RBP eCLIP14.19□□□□□ -0.14
VMP1-206ENST00000587945 LINC00303Q3SY05 128 aa14.19□□□□□ -0.14
VMP1-206ENST00000587945 ODF2Q5BJF6 829 aa14.19□□□□□ -0.14
VMP1-206ENST00000587945 LRRC38Q5VT99 294 aa14.19□□□□□ -0.14
VMP1-206ENST00000587945 TMEM71Q6P5X7 295 aa14.19□□□□□ -0.14
VMP1-206ENST00000587945 IYDQ6PHW0 289 aa14.19□□□□□ -0.14
VMP1-206ENST00000587945 FAM129CQ86XR2 697 aa14.19□□□□□ -0.14
VMP1-206ENST00000587945 RHOT2Q8IXI1 618 aa14.19□□□□□ -0.14
VMP1-206ENST00000587945 AGBL5Q8NDL9 886 aa14.19□□□□□ -0.14
VMP1-206ENST00000587945 ART4Q93070 314 aa14.19□□□□□ -0.14
VMP1-206ENST00000587945 TADA1Q96BN2 335 aa14.19□□□□□ -0.14
VMP1-206ENST00000587945 MED8Q96G25 268 aa14.19□□□□□ -0.14
VMP1-206ENST00000587945 TAAR9Q96RI9 348 aa14.19□□□□□ -0.14
VMP1-206ENST00000587945 SLC25A51Q9H1U9 297 aa14.19□□□□□ -0.14
VMP1-206ENST00000587945 TSPY26PQ9H489 355 aa14.19□□□□□ -0.14
VMP1-206ENST00000587945 PRDM8Q9NQV8 689 aa14.19□□□□□ -0.14
VMP1-206ENST00000587945 UBP1Q9NZI7 540 aa14.19□□□□□ -0.14
VMP1-206ENST00000587945 SAE1Q9UBE0 346 aaPredicted RBP14.19□□□□□ -0.14
VMP1-206ENST00000587945 PCDHGA4Q9Y5G9 962 aa14.19□□□□□ -0.14
VMP1-206ENST00000587945 B3GALT1Q9Y5Z6 326 aa14.19□□□□□ -0.14
VMP1-206ENST00000587945 ZNF462Q96JM2 2506 aa14.19□□□□□ -0.14
VMP1-206ENST00000587945 CFAP46Q8IYW2 2715 aa14.19□□□□□ -0.14
VMP1-206ENST00000587945 ARHGEF17Q96PE2 2063 aaPredicted RBP14.18□□□□□ -0.14
VMP1-206ENST00000587945 A6NCN8 305 aa14.18□□□□□ -0.14
VMP1-206ENST00000587945 EFCAB7A8K855 629 aa14.18□□□□□ -0.14
VMP1-206ENST00000587945 AURKAO14965 403 aa14.18□□□□□ -0.14
VMP1-206ENST00000587945 PPP1R12AO14974 1030 aaPredicted RBP14.18□□□□□ -0.14
VMP1-206ENST00000587945 SLC25A14O95258 325 aaPredicted RBP14.18□□□□□ -0.14
VMP1-206ENST00000587945 ZFXP17010 805 aaPredicted RBP14.18□□□□□ -0.14
VMP1-206ENST00000587945 COMTP21964 271 aa14.18□□□□□ -0.14
VMP1-206ENST00000587945 CD82P27701 267 aa14.18□□□□□ -0.14
VMP1-206ENST00000587945 MAPK9P45984 424 aa14.18□□□□□ -0.14
VMP1-206ENST00000587945 CDK18Q07002 472 aa14.18□□□□□ -0.14
VMP1-206ENST00000587945 ZNF569Q5MCW4 686 aa14.18□□□□□ -0.14
VMP1-206ENST00000587945 KAZNQ674X7 775 aa14.18□□□□□ -0.14
VMP1-206ENST00000587945 CRTC3Q6UUV7 619 aa14.18□□□□□ -0.14
VMP1-206ENST00000587945 TMC3Q7Z5M5 1100 aa14.18□□□□□ -0.14
VMP1-206ENST00000587945 VSIG1Q86XK7 387 aa14.18□□□□□ -0.14
VMP1-206ENST00000587945 RHOT1Q8IXI2 618 aa14.18□□□□□ -0.14
VMP1-206ENST00000587945 OR10G6Q8NH81 332 aa14.18□□□□□ -0.14
VMP1-206ENST00000587945 NCSTNQ92542 709 aa14.18□□□□□ -0.14
VMP1-206ENST00000587945 TBC1D10AQ9BXI6 508 aa14.18□□□□□ -0.14
VMP1-206ENST00000587945 GPR63Q9BZJ6 419 aa14.18□□□□□ -0.14
VMP1-206ENST00000587945 B3GNT4Q9C0J1 378 aa14.18□□□□□ -0.14
VMP1-206ENST00000587945 CARD9Q9H257 536 aa14.18□□□□□ -0.14
VMP1-206ENST00000587945 GOLPH3Q9H4A6 298 aa14.18□□□□□ -0.14
VMP1-206ENST00000587945 RMI1Q9H9A7 625 aa14.18□□□□□ -0.14
VMP1-206ENST00000587945 GLOD4Q9HC38 313 aa14.18□□□□□ -0.14
VMP1-206ENST00000587945 MAGEE1Q9HCI5 957 aa14.18□□□□□ -0.14
VMP1-206ENST00000587945 SARS2Q9NP81 518 aaKnown RBP14.18□□□□□ -0.14
VMP1-206ENST00000587945 SLC39A1Q9NY26 324 aa14.18□□□□□ -0.14
VMP1-206ENST00000587945 ZNF711Q9Y462 761 aa14.18□□□□□ -0.14
VMP1-206ENST00000587945 SPO11Q9Y5K1 396 aa14.18□□□□□ -0.14
VMP1-206ENST00000587945 B8ZZF3 427 aa14.17□□□□□ -0.14
VMP1-206ENST00000587945 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.17□□□□□ -0.14
VMP1-206ENST00000587945 F5H423 210 aaPredicted RBP14.17□□□□□ -0.14
VMP1-206ENST00000587945 STMND1H3BQB6 276 aa14.17□□□□□ -0.14
VMP1-206ENST00000587945 PYCARD-AS1I3L0S3 204 aa14.17□□□□□ -0.14
VMP1-206ENST00000587945 SPOPO43791 374 aa14.17□□□□□ -0.14
VMP1-206ENST00000587945 DUX1O43812 170 aa14.17□□□□□ -0.14
VMP1-206ENST00000587945 MTX2O75431 263 aa14.17□□□□□ -0.14
VMP1-206ENST00000587945 PMPCBO75439 489 aa14.17□□□□□ -0.14
VMP1-206ENST00000587945 PECAM1P16284 738 aaPredicted RBP14.17□□□□□ -0.14
VMP1-206ENST00000587945 BPIP17213 487 aa14.17□□□□□ -0.14
VMP1-206ENST00000587945 PTPN3P26045 913 aa14.17□□□□□ -0.14
VMP1-206ENST00000587945 CDKN2BP42772 138 aa14.17□□□□□ -0.14
VMP1-206ENST00000587945 SLC1A1P43005 524 aa14.17□□□□□ -0.14
VMP1-206ENST00000587945 NOMO1Q15155 1222 aa14.17□□□□□ -0.14
VMP1-206ENST00000587945 SKOR2Q2VWA4 1001 aaPredicted RBP14.17□□□□□ -0.14
VMP1-206ENST00000587945 PLA2G4EQ3MJ16 856 aa14.17□□□□□ -0.14
VMP1-206ENST00000587945 TEX44Q53QW1 395 aa14.17□□□□□ -0.14
VMP1-206ENST00000587945 ADGRG6Q86SQ4 1221 aa14.17□□□□□ -0.14
VMP1-206ENST00000587945 HTR3CQ8WXA8 447 aa14.17□□□□□ -0.14
VMP1-206ENST00000587945 GLYATL1Q969I3 302 aa14.17□□□□□ -0.14
VMP1-206ENST00000587945 DPYSL5Q9BPU6 564 aa14.17□□□□□ -0.14
VMP1-206ENST00000587945 HERPUD2Q9BSE4 406 aa14.17□□□□□ -0.14
VMP1-206ENST00000587945 OSGEPL1Q9H4B0 414 aa14.17□□□□□ -0.14
VMP1-206ENST00000587945 TRIM39Q9HCM9 518 aa14.17□□□□□ -0.14
VMP1-206ENST00000587945 BPIFA1Q9NP55 256 aa14.17□□□□□ -0.14
VMP1-206ENST00000587945 KLC4Q9NSK0 619 aa14.17□□□□□ -0.14
VMP1-206ENST00000587945 DDX56Q9NY93 547 aaKnown RBP14.17□□□□□ -0.14
VMP1-206ENST00000587945 SCHIP1Q9P0W5 487 aaPredicted RBP14.17□□□□□ -0.14
VMP1-206ENST00000587945 PDP2Q9P2J9 529 aa14.17□□□□□ -0.14
VMP1-206ENST00000587945 SLC23A2Q9UGH3 650 aa14.17□□□□□ -0.14
VMP1-206ENST00000587945 KLHL3Q9UH77 587 aa14.17□□□□□ -0.14
VMP1-206ENST00000587945 PCDHGA3Q9Y5H0 932 aa14.17□□□□□ -0.14
VMP1-206ENST00000587945 ADGRG1Q9Y653 693 aa14.17□□□□□ -0.14
VMP1-206ENST00000587945 HELZ2Q9BYK8 2649 aaKnown RBP14.16□□□□□ -0.14
VMP1-206ENST00000587945 A0A0A6YYK5 440 aaPredicted RBP14.16□□□□□ -0.14
VMP1-206ENST00000587945 AKR1B15C9JRZ8 316 aaPredicted RBP14.16□□□□□ -0.14
VMP1-206ENST00000587945 CST8O60676 142 aa14.16□□□□□ -0.14
VMP1-206ENST00000587945 NDST3O95803 873 aa14.16□□□□□ -0.14
VMP1-206ENST00000587945 F3P13726 295 aa14.16□□□□□ -0.14
VMP1-206ENST00000587945 CD68P34810 354 aaPredicted RBP14.16□□□□□ -0.14
VMP1-206ENST00000587945 UGT1A3P35503 534 aa14.16□□□□□ -0.14
VMP1-206ENST00000587945 DCDC1P59894 354 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms