RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 PDE1BQ01064 536 aa5.52□□□□□ -1.53
SMARCE1-219ENST00000583294 ZNF155Q12901 538 aaPredicted RBP5.52□□□□□ -1.53
SMARCE1-219ENST00000583294 KCNC3Q14003 757 aa5.52□□□□□ -1.53
SMARCE1-219ENST00000583294 SF3B4Q15427 424 aaKnown RBP eCLIP5.52□□□□□ -1.53
SMARCE1-219ENST00000583294 DECR1Q16698 335 aa5.52□□□□□ -1.53
SMARCE1-219ENST00000583294 RARS2Q5T160 578 aaKnown RBP5.52□□□□□ -1.53
SMARCE1-219ENST00000583294 MFSD4BQ5TF39 518 aa5.52□□□□□ -1.53
SMARCE1-219ENST00000583294 PDXDC1Q6P996 788 aa5.52□□□□□ -1.53
SMARCE1-219ENST00000583294 CREB3L2Q70SY1 520 aa5.52□□□□□ -1.53
SMARCE1-219ENST00000583294 LINC00346Q8IVM7 164 aa5.52□□□□□ -1.53
SMARCE1-219ENST00000583294 ARID3BQ8IVW6 561 aaPredicted RBP5.52□□□□□ -1.53
SMARCE1-219ENST00000583294 SCML4Q8N228 414 aa5.52□□□□□ -1.53
SMARCE1-219ENST00000583294 RASGEF1CQ8N431 466 aa5.52□□□□□ -1.53
SMARCE1-219ENST00000583294 IL17RCQ8NAC3 791 aa5.52□□□□□ -1.53
SMARCE1-219ENST00000583294 GSDMBQ8TAX9 411 aa5.52□□□□□ -1.53
SMARCE1-219ENST00000583294 TRPC4APQ8TEL6 797 aa5.52□□□□□ -1.53
SMARCE1-219ENST00000583294 TAAR8Q969N4 342 aa5.52□□□□□ -1.53
SMARCE1-219ENST00000583294 SEMA3CQ99985 751 aa5.52□□□□□ -1.53
SMARCE1-219ENST00000583294 C1QTNF1Q9BXJ1 281 aa5.52□□□□□ -1.53
SMARCE1-219ENST00000583294 HIPK2Q9H2X6 1198 aa5.52□□□□□ -1.53
SMARCE1-219ENST00000583294 DNAJC18Q9H819 358 aa5.52□□□□□ -1.53
SMARCE1-219ENST00000583294 ANKEF1Q9NU02 776 aa5.52□□□□□ -1.53
SMARCE1-219ENST00000583294 ARHGEF38Q9NXL2 777 aa5.52□□□□□ -1.53
SMARCE1-219ENST00000583294 UBA2Q9UBT2 640 aaPredicted RBP5.52□□□□□ -1.53
SMARCE1-219ENST00000583294 SEC63Q9UGP8 760 aaKnown RBP5.52□□□□□ -1.53
SMARCE1-219ENST00000583294 CHORDC1Q9UHD1 332 aaPredicted RBP5.52□□□□□ -1.53
SMARCE1-219ENST00000583294 FBXL2Q9UKC9 423 aa5.52□□□□□ -1.53
SMARCE1-219ENST00000583294 PDS5AQ29RF7 1337 aaKnown RBP5.51□□□□□ -1.53
SMARCE1-219ENST00000583294 OR2A25A4D2G3 310 aa5.51□□□□□ -1.53
SMARCE1-219ENST00000583294 GOLGA6L9A6NEM1 432 aa5.51□□□□□ -1.53
SMARCE1-219ENST00000583294 LRRC72A6NJI9 287 aa5.51□□□□□ -1.53
SMARCE1-219ENST00000583294 MAP2K7O14733 419 aa5.51□□□□□ -1.53
SMARCE1-219ENST00000583294 SMAD9O15198 467 aaKnown RBP5.51□□□□□ -1.53
SMARCE1-219ENST00000583294 RFPL2O75678 378 aa5.51□□□□□ -1.53
SMARCE1-219ENST00000583294 PLA2G2AP14555 144 aa5.51□□□□□ -1.53
SMARCE1-219ENST00000583294 MMP9P14780 707 aa5.51□□□□□ -1.53
SMARCE1-219ENST00000583294 ITGB6P18564 788 aa5.51□□□□□ -1.53
SMARCE1-219ENST00000583294 TNFRSF8P28908 595 aa5.51□□□□□ -1.53
SMARCE1-219ENST00000583294 CORO1AP31146 461 aaKnown RBP5.51□□□□□ -1.53
SMARCE1-219ENST00000583294 FOXG1P55316 489 aaPredicted RBP5.51□□□□□ -1.53
SMARCE1-219ENST00000583294 CLDN20P56880 219 aa5.51□□□□□ -1.53
SMARCE1-219ENST00000583294 DSCR9P59020 149 aa5.51□□□□□ -1.53
SMARCE1-219ENST00000583294 ECT2LQ008S8 904 aa5.51□□□□□ -1.53
SMARCE1-219ENST00000583294 DLG1Q12959 904 aa5.51□□□□□ -1.53
SMARCE1-219ENST00000583294 KCTD2Q14681 263 aa5.51□□□□□ -1.53
SMARCE1-219ENST00000583294 IGSF11Q5DX21 431 aa5.51□□□□□ -1.53
SMARCE1-219ENST00000583294 C18orf63Q68DL7 685 aa5.51□□□□□ -1.53
SMARCE1-219ENST00000583294 GPR180Q86V85 440 aa5.51□□□□□ -1.53
SMARCE1-219ENST00000583294 KBTBD6Q86V97 674 aa5.51□□□□□ -1.53
SMARCE1-219ENST00000583294 SPATA2LQ8IUW3 424 aaPredicted RBP5.51□□□□□ -1.53
SMARCE1-219ENST00000583294 ODF3L1Q8IXM7 274 aa5.51□□□□□ -1.53
SMARCE1-219ENST00000583294 SAMD14Q8IZD0 417 aaPredicted RBP5.51□□□□□ -1.53
SMARCE1-219ENST00000583294 MED30Q96HR3 178 aa5.51□□□□□ -1.53
SMARCE1-219ENST00000583294 THOC3Q96J01 351 aaKnown RBP5.51□□□□□ -1.53
SMARCE1-219ENST00000583294 LYZL4Q96KX0 146 aa5.51□□□□□ -1.53
SMARCE1-219ENST00000583294 PAFAH2Q99487 392 aa5.51□□□□□ -1.53
SMARCE1-219ENST00000583294 SIL1Q9H173 461 aa5.51□□□□□ -1.53
SMARCE1-219ENST00000583294 MAGIXQ9H6Y5 334 aa5.51□□□□□ -1.53
SMARCE1-219ENST00000583294 MCM9Q9NXL9 1143 aa5.51□□□□□ -1.53
SMARCE1-219ENST00000583294 SMARCAL1Q9NZC9 954 aa5.51□□□□□ -1.53
SMARCE1-219ENST00000583294 MRPL15Q9P015 296 aaKnown RBP5.51□□□□□ -1.53
SMARCE1-219ENST00000583294 SIX4Q9UIU6 781 aa5.51□□□□□ -1.53
SMARCE1-219ENST00000583294 DBNLQ9UJU6 430 aaKnown RBP5.51□□□□□ -1.53
SMARCE1-219ENST00000583294 B3GALT5Q9Y2C3 310 aa5.51□□□□□ -1.53
SMARCE1-219ENST00000583294 A0A1W2PR77 199 aa5.5□□□□□ -1.53
SMARCE1-219ENST00000583294 FAM90A26D6RGX4 464 aa5.5□□□□□ -1.53
SMARCE1-219ENST00000583294 ANKRD28O15084 1053 aa5.5□□□□□ -1.53
SMARCE1-219ENST00000583294 TMCC2O75069 709 aa5.5□□□□□ -1.53
SMARCE1-219ENST00000583294 ZBTB11O95625 1053 aaPredicted RBP5.5□□□□□ -1.53
SMARCE1-219ENST00000583294 PMS2P2O95744 297 aa5.5□□□□□ -1.53
SMARCE1-219ENST00000583294 LINC00271P0C7V0 271 aa5.5□□□□□ -1.53
SMARCE1-219ENST00000583294 T-ENOLP0DO92 83 aa5.5□□□□□ -1.53
SMARCE1-219ENST00000583294 NNMTP40261 264 aa5.5□□□□□ -1.53
SMARCE1-219ENST00000583294 TMPOP42166 694 aaKnown RBP5.5□□□□□ -1.53
SMARCE1-219ENST00000583294 RRP1P56182 461 aaKnown RBP5.5□□□□□ -1.53
SMARCE1-219ENST00000583294 SEC61A1P61619 476 aaKnown RBP5.5□□□□□ -1.53
SMARCE1-219ENST00000583294 TMF1P82094 1093 aa5.5□□□□□ -1.53
SMARCE1-219ENST00000583294 SLC20A2Q08357 652 aa5.5□□□□□ -1.53
SMARCE1-219ENST00000583294 TNFAIP1Q13829 316 aa5.5□□□□□ -1.53
SMARCE1-219ENST00000583294 BECN1Q14457 450 aa5.5□□□□□ -1.53
SMARCE1-219ENST00000583294 PCLAFQ15004 111 aa5.5□□□□□ -1.53
SMARCE1-219ENST00000583294 SLC39A14Q15043 492 aa5.5□□□□□ -1.53
SMARCE1-219ENST00000583294 NTRK2Q16620 822 aa5.5□□□□□ -1.53
SMARCE1-219ENST00000583294 LCE1AQ5T7P2 110 aa5.5□□□□□ -1.53
SMARCE1-219ENST00000583294 PAPD4Q6PIY7 484 aaKnown RBP5.5□□□□□ -1.53
SMARCE1-219ENST00000583294 BRAT1Q6PJG6 821 aa5.5□□□□□ -1.53
SMARCE1-219ENST00000583294 ZDHHC17Q8IUH5 632 aa5.5□□□□□ -1.53
SMARCE1-219ENST00000583294 OR5R1Q8NH85 324 aa5.5□□□□□ -1.53
SMARCE1-219ENST00000583294 SPATA22Q8NHS9 363 aa5.5□□□□□ -1.53
SMARCE1-219ENST00000583294 MAGEC3Q8TD91 643 aa5.5□□□□□ -1.53
SMARCE1-219ENST00000583294 UTP15Q8TED0 518 aaKnown RBP5.5□□□□□ -1.53
SMARCE1-219ENST00000583294 SLC44A1Q8WWI5 657 aa5.5□□□□□ -1.53
SMARCE1-219ENST00000583294 LRRC59Q96AG4 307 aaKnown RBP5.5□□□□□ -1.53
SMARCE1-219ENST00000583294 SLC22A18Q96BI1 424 aa5.5□□□□□ -1.53
SMARCE1-219ENST00000583294 TMEM19Q96HH6 336 aa5.5□□□□□ -1.53
SMARCE1-219ENST00000583294 ADGRG7Q96K78 797 aa5.5□□□□□ -1.53
SMARCE1-219ENST00000583294 DDOQ99489 341 aa5.5□□□□□ -1.53
SMARCE1-219ENST00000583294 TEX12Q9BXU0 123 aa5.5□□□□□ -1.53
SMARCE1-219ENST00000583294 TM6SF1Q9BZW5 370 aa5.5□□□□□ -1.53
SMARCE1-219ENST00000583294 PCDH9Q9HC56 1237 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms