RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 TMEM168Q9H0V1 697 aa7.85□□□□□ -1.15
CCDC40-215ENST00000576033 EPB41L4BQ9H329 900 aa7.85□□□□□ -1.15
CCDC40-215ENST00000576033 ACBD3Q9H3P7 528 aa7.85□□□□□ -1.15
CCDC40-215ENST00000576033 CYP4F12Q9HCS2 524 aa7.85□□□□□ -1.15
CCDC40-215ENST00000576033 IL26Q9NPH9 171 aa7.85□□□□□ -1.15
CCDC40-215ENST00000576033 MED4Q9NPJ6 270 aa7.85□□□□□ -1.15
CCDC40-215ENST00000576033 CASS4Q9NQ75 786 aa7.85□□□□□ -1.15
CCDC40-215ENST00000576033 SYBUQ9NX95 663 aa7.85□□□□□ -1.15
CCDC40-215ENST00000576033 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.85□□□□□ -1.15
CCDC40-215ENST00000576033 PKD2L2Q9NZM6 624 aa7.85□□□□□ -1.15
CCDC40-215ENST00000576033 IL17CQ9P0M4 197 aa7.85□□□□□ -1.15
CCDC40-215ENST00000576033 PAK5Q9P286 719 aa7.85□□□□□ -1.15
CCDC40-215ENST00000576033 KLQ9UEF7 1012 aa7.85□□□□□ -1.15
CCDC40-215ENST00000576033 APOBEC3BQ9UH17 382 aaKnown RBP7.85□□□□□ -1.15
CCDC40-215ENST00000576033 FEZ2Q9UHY8 353 aaPredicted RBP7.85□□□□□ -1.15
CCDC40-215ENST00000576033 SUFUQ9UMX1 484 aa7.85□□□□□ -1.15
CCDC40-215ENST00000576033 AAR2Q9Y312 384 aaKnown RBP7.85□□□□□ -1.15
CCDC40-215ENST00000576033 NFS1Q9Y697 457 aa7.85□□□□□ -1.15
CCDC40-215ENST00000576033 COL5A1P20908 1838 aaPredicted RBP7.85□□□□□ -1.15
CCDC40-215ENST00000576033 CEP295Q9C0D2 2601 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 LY6G6EA0A0G2JKS1 128 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 PRSS38A1L453 326 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 GOLGA8KD6RF30 607 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 GOLGA8TH3BQL2 631 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 SLC30A4O14863 429 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 SUN1O94901 812 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 RASGRP1O95267 797 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 PRAMEF1O95521 474 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 EML2O95834 649 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 GAS8O95995 478 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 CSF2P04141 144 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 MYCLP1P12525 358 aaPredicted RBP7.84□□□□□ -1.15
CCDC40-215ENST00000576033 NME1P15531 152 aaKnown RBP7.84□□□□□ -1.15
CCDC40-215ENST00000576033 TSHRP16473 764 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 STIP1P31948 543 aaKnown RBP7.84□□□□□ -1.15
CCDC40-215ENST00000576033 TRIM23P36406 574 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 FDFT1P37268 417 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 SPAM1P38567 509 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 DPP6P42658 865 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 TNNT3P45378 269 aaPredicted RBP7.84□□□□□ -1.15
CCDC40-215ENST00000576033 KIAA1024LP59773 190 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 SRP54P61011 504 aaKnown RBP7.84□□□□□ -1.15
CCDC40-215ENST00000576033 XIAPP98170 497 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 DPTQ07507 201 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 CBLBQ13191 982 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 TAF1AQ15573 450 aaPredicted RBP7.84□□□□□ -1.15
CCDC40-215ENST00000576033 MSS51Q4VC12 460 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 CCDC157Q569K6 752 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 PRRT3Q5FWE3 981 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 CRTC3Q6UUV7 619 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 LRIG3Q6UXM1 1119 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 ADAMTSL4Q6UY14 1074 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 DET1Q7L5Y6 550 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 RABEPKQ7Z6M1 372 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 PIP4P1Q86T03 277 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 LDB1Q86U70 411 aaPredicted RBP7.84□□□□□ -1.15
CCDC40-215ENST00000576033 CAND1Q86VP6 1230 aaKnown RBP7.84□□□□□ -1.15
CCDC40-215ENST00000576033 IQCHQ86VS3 1027 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 NRROSQ86YC3 692 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 RELL1Q8IUW5 271 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 PIANPQ8IYJ0 282 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 NDUFAF2Q8N183 169 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 BEND7Q8N7W2 519 aaPredicted RBP7.84□□□□□ -1.15
CCDC40-215ENST00000576033 DNAAF3Q8N9W5 541 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 OR56A4Q8NGH8 313 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 OR13J1Q8NGT2 312 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 FBXO25Q8TCJ0 367 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 CCHCR1Q8TD31 782 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 SETD7Q8WTS6 366 aaKnown RBP7.84□□□□□ -1.15
CCDC40-215ENST00000576033 PATE1Q8WXA2 126 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 LRRC45Q96CN5 670 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 COX14Q96I36 57 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 WDR92Q96MX6 357 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 FMO2Q99518 471 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 FERMT1Q9BQL6 677 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 C1QTNF7Q9BXJ2 289 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 DPH5Q9H2P9 285 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 FAM83DQ9H4H8 585 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 CARS2Q9HA77 564 aaKnown RBP7.84□□□□□ -1.15
CCDC40-215ENST00000576033 ARNT2Q9HBZ2 717 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 SIRPGQ9P1W8 387 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 SLC17A6Q9P2U8 582 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 ATXN10Q9UBB4 475 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 ASIC3Q9UHC3 531 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 PCOLCE2Q9UKZ9 415 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 SNX24Q9Y343 169 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 U3KQA8 63 aa7.84□□□□□ -1.15
CCDC40-215ENST00000576033 FREM2Q5SZK8 3169 aa7.83□□□□□ -1.16
CCDC40-215ENST00000576033 ARHGEF17Q96PE2 2063 aaPredicted RBP7.83□□□□□ -1.16
CCDC40-215ENST00000576033 LAMA5O15230 3695 aa7.83□□□□□ -1.16
CCDC40-215ENST00000576033 GLYATL1P3A0A0U1RQE8 302 aa7.83□□□□□ -1.16
CCDC40-215ENST00000576033 CCDC162PA2VCL2 907 aa7.83□□□□□ -1.16
CCDC40-215ENST00000576033 CACNB4O00305 520 aaPredicted RBP7.83□□□□□ -1.16
CCDC40-215ENST00000576033 STX7O15400 261 aaKnown RBP7.83□□□□□ -1.16
CCDC40-215ENST00000576033 SIGLEC6O43699 453 aa7.83□□□□□ -1.16
CCDC40-215ENST00000576033 DNAJC6O75061 913 aa7.83□□□□□ -1.16
CCDC40-215ENST00000576033 CBFA2T3O75081 653 aa7.83□□□□□ -1.16
CCDC40-215ENST00000576033 ASMTLO95671 621 aa7.83□□□□□ -1.16
CCDC40-215ENST00000576033 EPOP01588 193 aa7.83□□□□□ -1.16
CCDC40-215ENST00000576033 NUDT17P0C025 328 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms