RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 HACD3Q9P035 362 aa23.49■■□□□ 1.35
NPLOC4-217ENST00000574897 STK39Q9UEW8 545 aa23.49■■□□□ 1.35
NPLOC4-217ENST00000574897 PRPF19Q9UMS4 504 aaKnown RBP23.49■■□□□ 1.35
NPLOC4-217ENST00000574897 CCL26Q9Y258 94 aa23.49■■□□□ 1.35
NPLOC4-217ENST00000574897 ZNF106Q9H2Y7 1883 aaKnown RBP23.48■■□□□ 1.35
NPLOC4-217ENST00000574897 GAPDHSO14556 408 aaPredicted RBP23.48■■□□□ 1.35
NPLOC4-217ENST00000574897 ZNF821O75541 412 aaPredicted RBP23.48■■□□□ 1.35
NPLOC4-217ENST00000574897 CTSAP10619 480 aa23.48■■□□□ 1.35
NPLOC4-217ENST00000574897 RAG1P15918 1043 aa23.48■■□□□ 1.35
NPLOC4-217ENST00000574897 NME5P56597 212 aa23.48■■□□□ 1.35
NPLOC4-217ENST00000574897 MS4A2Q01362 244 aa23.48■■□□□ 1.35
NPLOC4-217ENST00000574897 CLCQ05315 142 aa23.48■■□□□ 1.35
NPLOC4-217ENST00000574897 ILF2Q12905 390 aaKnown RBP23.48■■□□□ 1.35
NPLOC4-217ENST00000574897 SQLEQ14534 574 aa23.48■■□□□ 1.35
NPLOC4-217ENST00000574897 ZRSR2Q15696 482 aaKnown RBP23.48■■□□□ 1.35
NPLOC4-217ENST00000574897 ZSWIM9Q86XI8 627 aa23.48■■□□□ 1.35
NPLOC4-217ENST00000574897 BOCQ9BWV1 1114 aa23.48■■□□□ 1.35
NPLOC4-217ENST00000574897 SLC46A2Q9BY10 475 aa23.48■■□□□ 1.35
NPLOC4-217ENST00000574897 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.48■■□□□ 1.35
NPLOC4-217ENST00000574897 UTP6Q9NYH9 597 aaKnown RBP23.48■■□□□ 1.35
NPLOC4-217ENST00000574897 AZIN1O14977 448 aa23.48■■□□□ 1.35
NPLOC4-217ENST00000574897 PYGLP06737 847 aa23.48■■□□□ 1.35
NPLOC4-217ENST00000574897 HMGCLP35914 325 aa23.48■■□□□ 1.35
NPLOC4-217ENST00000574897 CCR2P41597 374 aa23.48■■□□□ 1.35
NPLOC4-217ENST00000574897 ATP6V0D1P61421 351 aa23.48■■□□□ 1.35
NPLOC4-217ENST00000574897 PTK2BQ14289 1009 aa23.48■■□□□ 1.35
NPLOC4-217ENST00000574897 UGT3A1Q6NUS8 523 aa23.48■■□□□ 1.35
NPLOC4-217ENST00000574897 HTR3DQ70Z44 454 aa23.48■■□□□ 1.35
NPLOC4-217ENST00000574897 CMTM8Q8IZV2 173 aa23.48■■□□□ 1.35
NPLOC4-217ENST00000574897 KLHL23Q8NBE8 558 aa23.48■■□□□ 1.35
NPLOC4-217ENST00000574897 RIN3Q8TB24 985 aa23.48■■□□□ 1.35
NPLOC4-217ENST00000574897 SLC45A3Q96JT2 553 aa23.48■■□□□ 1.35
NPLOC4-217ENST00000574897 MAGEE1Q9HCI5 957 aa23.48■■□□□ 1.35
NPLOC4-217ENST00000574897 GOLGA8CPA6NN73 597 aa23.47■■□□□ 1.35
NPLOC4-217ENST00000574897 E5RI56 91 aa23.47■■□□□ 1.35
NPLOC4-217ENST00000574897 H3BNX3 289 aa23.47■■□□□ 1.35
NPLOC4-217ENST00000574897 CCL16O15467 120 aa23.47■■□□□ 1.35
NPLOC4-217ENST00000574897 CLDN7O95471 211 aa23.47■■□□□ 1.35
NPLOC4-217ENST00000574897 ITGB6P18564 788 aa23.47■■□□□ 1.35
NPLOC4-217ENST00000574897 TCN1P20061 433 aaPredicted RBP23.47■■□□□ 1.35
NPLOC4-217ENST00000574897 AP1S1P61966 158 aa23.47■■□□□ 1.35
NPLOC4-217ENST00000574897 GRB7Q14451 532 aa23.47■■□□□ 1.35
NPLOC4-217ENST00000574897 DGKKQ5KSL6 1271 aa23.47■■□□□ 1.35
NPLOC4-217ENST00000574897 LPCAT4Q643R3 524 aa23.47■■□□□ 1.35
NPLOC4-217ENST00000574897 RETSATQ6NUM9 610 aa23.47■■□□□ 1.35
NPLOC4-217ENST00000574897 PAOXQ6QHF9 649 aa23.47■■□□□ 1.35
NPLOC4-217ENST00000574897 DHDDSQ86SQ9 333 aa23.47■■□□□ 1.35
NPLOC4-217ENST00000574897 NKAPQ8N5F7 415 aaKnown RBP23.47■■□□□ 1.35
NPLOC4-217ENST00000574897 P2RY12Q9H244 342 aa23.47■■□□□ 1.35
NPLOC4-217ENST00000574897 TIMM22Q9Y584 194 aa23.47■■□□□ 1.35
NPLOC4-217ENST00000574897 SLC30A1Q9Y6M5 507 aa23.47■■□□□ 1.35
NPLOC4-217ENST00000574897 MTCL1Q9Y4B5 1905 aaKnown RBP23.47■■□□□ 1.35
NPLOC4-217ENST00000574897 ZBBXA8MT70 800 aa23.47■■□□□ 1.35
NPLOC4-217ENST00000574897 LEFTY2O00292 366 aa23.47■■□□□ 1.35
NPLOC4-217ENST00000574897 BNIP3LO60238 219 aa23.47■■□□□ 1.35
NPLOC4-217ENST00000574897 CXCL14O95715 111 aa23.47■■□□□ 1.35
NPLOC4-217ENST00000574897 PPM1AP35813 382 aa23.47■■□□□ 1.35
NPLOC4-217ENST00000574897 SLC7A9P82251 487 aa23.47■■□□□ 1.35
NPLOC4-217ENST00000574897 KANK2Q63ZY3 851 aa23.47■■□□□ 1.35
NPLOC4-217ENST00000574897 LILRA6Q6PI73 481 aa23.47■■□□□ 1.35
NPLOC4-217ENST00000574897 IZUMO2Q6UXV1 221 aa23.47■■□□□ 1.35
NPLOC4-217ENST00000574897 KBTBD6Q86V97 674 aa23.47■■□□□ 1.35
NPLOC4-217ENST00000574897 DDIASQ8IXT1 998 aa23.47■■□□□ 1.35
NPLOC4-217ENST00000574897 JADE3Q92613 823 aa23.47■■□□□ 1.35
NPLOC4-217ENST00000574897 C1orf232A0A0U1RR37 186 aa23.46■■□□□ 1.35
NPLOC4-217ENST00000574897 LINC00032P0C843 101 aa23.46■■□□□ 1.35
NPLOC4-217ENST00000574897 CACNG1Q06432 222 aa23.46■■□□□ 1.35
NPLOC4-217ENST00000574897 BCL2L1Q07817 233 aa23.46■■□□□ 1.35
NPLOC4-217ENST00000574897 PLEKHG6Q3KR16 790 aa23.46■■□□□ 1.35
NPLOC4-217ENST00000574897 CMPK2Q5EBM0 449 aa23.46■■□□□ 1.35
NPLOC4-217ENST00000574897 REP15Q6BDI9 236 aa23.46■■□□□ 1.35
NPLOC4-217ENST00000574897 FIBCD1Q8N539 461 aa23.46■■□□□ 1.35
NPLOC4-217ENST00000574897 DCBLD1Q8N8Z6 715 aa23.46■■□□□ 1.35
NPLOC4-217ENST00000574897 ZNF184Q99676 751 aaPredicted RBP23.46■■□□□ 1.35
NPLOC4-217ENST00000574897 BEGAINQ9BUH8 593 aa23.46■■□□□ 1.35
NPLOC4-217ENST00000574897 VPS9D1Q9Y2B5 631 aa23.46■■□□□ 1.35
NPLOC4-217ENST00000574897 C9JVG2 144 aa23.45■■□□□ 1.35
NPLOC4-217ENST00000574897 PRAMEF1O95521 474 aa23.45■■□□□ 1.35
NPLOC4-217ENST00000574897 FGF4P08620 206 aa23.45■■□□□ 1.35
NPLOC4-217ENST00000574897 HNF1BP35680 557 aa23.45■■□□□ 1.35
NPLOC4-217ENST00000574897 CLCN4P51793 760 aa23.45■■□□□ 1.35
NPLOC4-217ENST00000574897 CLCN7P51798 805 aa23.45■■□□□ 1.35
NPLOC4-217ENST00000574897 IL2P60568 153 aa23.45■■□□□ 1.35
NPLOC4-217ENST00000574897 UCMAQ8WVF2 138 aa23.45■■□□□ 1.35
NPLOC4-217ENST00000574897 ZNF225Q9UK10 706 aa23.45■■□□□ 1.35
NPLOC4-217ENST00000574897 ASB3Q9Y575 518 aa23.45■■□□□ 1.35
NPLOC4-217ENST00000574897 TRAV19A0A0A6YYK7 116 aa23.45■■□□□ 1.34
NPLOC4-217ENST00000574897 A0A0J9YYE9 177 aa23.45■■□□□ 1.34
NPLOC4-217ENST00000574897 TRBC1P01850 177 aa23.45■■□□□ 1.34
NPLOC4-217ENST00000574897 RPS17P08708 135 aaKnown RBP23.45■■□□□ 1.34
NPLOC4-217ENST00000574897 UGT1A6P19224 532 aa23.45■■□□□ 1.34
NPLOC4-217ENST00000574897 UGT1A1P22309 533 aa23.45■■□□□ 1.34
NPLOC4-217ENST00000574897 UGT1A4P22310 534 aa23.45■■□□□ 1.34
NPLOC4-217ENST00000574897 UGT1A3P35503 534 aa23.45■■□□□ 1.34
NPLOC4-217ENST00000574897 UGT1A5P35504 534 aa23.45■■□□□ 1.34
NPLOC4-217ENST00000574897 PTGER3P43115 390 aa23.45■■□□□ 1.34
NPLOC4-217ENST00000574897 LAYNQ6UX15 382 aa23.45■■□□□ 1.34
NPLOC4-217ENST00000574897 TSPAN33Q86UF1 283 aa23.45■■□□□ 1.34
NPLOC4-217ENST00000574897 SERPINA9Q86WD7 417 aa23.45■■□□□ 1.34
NPLOC4-217ENST00000574897 KREMEN2Q8NCW0 462 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms