RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 CASP2P42575 452 aa18.95■□□□□ 0.62
SCARF1-206ENST00000573852 TBX4P57082 545 aa18.95■□□□□ 0.62
SCARF1-206ENST00000573852 TSNQ15631 228 aaKnown RBP18.95■□□□□ 0.62
SCARF1-206ENST00000573852 Q6ZNX1 250 aa18.95■□□□□ 0.62
SCARF1-206ENST00000573852 KIAA1191Q96A73 305 aa18.95■□□□□ 0.62
SCARF1-206ENST00000573852 PLEKHG4BQ96PX9 1271 aa18.95■□□□□ 0.62
SCARF1-206ENST00000573852 SEPHS2Q99611 448 aa18.95■□□□□ 0.62
SCARF1-206ENST00000573852 ZNF225Q9UK10 706 aa18.95■□□□□ 0.62
SCARF1-206ENST00000573852 MED16Q9Y2X0 877 aa18.95■□□□□ 0.62
SCARF1-206ENST00000573852 A0A1W2PPW3 197 aa18.94■□□□□ 0.62
SCARF1-206ENST00000573852 MGEA5O60502 916 aa18.94■□□□□ 0.62
SCARF1-206ENST00000573852 VPS4BO75351 444 aa18.94■□□□□ 0.62
SCARF1-206ENST00000573852 ECI2O75521 394 aa18.94■□□□□ 0.62
SCARF1-206ENST00000573852 CD247P20963 164 aa18.94■□□□□ 0.62
SCARF1-206ENST00000573852 AGTR2P50052 363 aa18.94■□□□□ 0.62
SCARF1-206ENST00000573852 STC1P52823 247 aa18.94■□□□□ 0.62
SCARF1-206ENST00000573852 KCTD8Q6ZWB6 473 aa18.94■□□□□ 0.62
SCARF1-206ENST00000573852 SPATA19Q7Z5L4 167 aa18.94■□□□□ 0.62
SCARF1-206ENST00000573852 TBC1D21Q8IYX1 336 aa18.94■□□□□ 0.62
SCARF1-206ENST00000573852 LRRC43Q8N309 656 aa18.94■□□□□ 0.62
SCARF1-206ENST00000573852 STAG3L4Q8TBR4 150 aa18.94■□□□□ 0.62
SCARF1-206ENST00000573852 TSPEARQ8WU66 669 aa18.94■□□□□ 0.62
SCARF1-206ENST00000573852 BIRC7Q96CA5 298 aa18.94■□□□□ 0.62
SCARF1-206ENST00000573852 PTPN18Q99952 460 aa18.94■□□□□ 0.62
SCARF1-206ENST00000573852 INTS7Q9NVH2 962 aaKnown RBP18.94■□□□□ 0.62
SCARF1-206ENST00000573852 UBA6A0AVT1 1052 aaPredicted RBP18.94■□□□□ 0.62
SCARF1-206ENST00000573852 CDC7O00311 574 aa18.94■□□□□ 0.62
SCARF1-206ENST00000573852 SNAP91O60641 907 aa18.94■□□□□ 0.62
SCARF1-206ENST00000573852 EEDO75530 441 aaKnown RBP18.94■□□□□ 0.62
SCARF1-206ENST00000573852 HOXB8P17481 243 aaPredicted RBP18.94■□□□□ 0.62
SCARF1-206ENST00000573852 HRH2P25021 359 aa18.94■□□□□ 0.62
SCARF1-206ENST00000573852 GPR15P49685 360 aa18.94■□□□□ 0.62
SCARF1-206ENST00000573852 FGD3Q5JSP0 725 aa18.94■□□□□ 0.62
SCARF1-206ENST00000573852 AARS2Q5JTZ9 985 aaKnown RBP18.94■□□□□ 0.62
SCARF1-206ENST00000573852 MORN1Q5T089 497 aa18.94■□□□□ 0.62
SCARF1-206ENST00000573852 ANKS6Q68DC2 871 aa18.94■□□□□ 0.62
SCARF1-206ENST00000573852 USP51Q70EK9 711 aa18.94■□□□□ 0.62
SCARF1-206ENST00000573852 SYVN1Q86TM6 617 aa18.94■□□□□ 0.62
SCARF1-206ENST00000573852 ZNF420Q8TAQ5 688 aaPredicted RBP18.94■□□□□ 0.62
SCARF1-206ENST00000573852 ZNF599Q96NL3 588 aa18.94■□□□□ 0.62
SCARF1-206ENST00000573852 C1orf50Q9BV19 199 aa18.94■□□□□ 0.62
SCARF1-206ENST00000573852 MUC13Q9H3R2 512 aa18.94■□□□□ 0.62
SCARF1-206ENST00000573852 C8orf4Q9NR00 106 aa18.94■□□□□ 0.62
SCARF1-206ENST00000573852 INTS10Q9NVR2 710 aaKnown RBP18.94■□□□□ 0.62
SCARF1-206ENST00000573852 MYADML2A6NDP7 307 aa18.93■□□□□ 0.62
SCARF1-206ENST00000573852 NCF1BA6NI72 391 aaPredicted RBP18.93■□□□□ 0.62
SCARF1-206ENST00000573852 NCF1CA8MVU1 366 aaPredicted RBP18.93■□□□□ 0.62
SCARF1-206ENST00000573852 RHOBTB1O94844 696 aa18.93■□□□□ 0.62
SCARF1-206ENST00000573852 LDLRP01130 860 aa18.93■□□□□ 0.62
SCARF1-206ENST00000573852 HNRNPCP07910 306 aaKnown RBP eCLIP18.93■□□□□ 0.62
SCARF1-206ENST00000573852 NCF1P14598 390 aaPredicted RBP18.93■□□□□ 0.62
SCARF1-206ENST00000573852 FMO4P31512 558 aa18.93■□□□□ 0.62
SCARF1-206ENST00000573852 ACVRL1P37023 503 aa18.93■□□□□ 0.62
SCARF1-206ENST00000573852 ADARB1P78563 741 aaKnown RBP18.93■□□□□ 0.62
SCARF1-206ENST00000573852 POLD3Q15054 466 aaPredicted RBP18.93■□□□□ 0.62
SCARF1-206ENST00000573852 SLC39A12Q504Y0 691 aa18.93■□□□□ 0.62
SCARF1-206ENST00000573852 NANOGP8Q6NSW7 305 aa18.93■□□□□ 0.62
SCARF1-206ENST00000573852 UGT3A1Q6NUS8 523 aa18.93■□□□□ 0.62
SCARF1-206ENST00000573852 FBXL22Q6P050 247 aa18.93■□□□□ 0.62
SCARF1-206ENST00000573852 ZNF554Q86TJ5 538 aa18.93■□□□□ 0.62
SCARF1-206ENST00000573852 SMYD1Q8NB12 490 aa18.93■□□□□ 0.62
SCARF1-206ENST00000573852 OR2T11Q8NH01 316 aa18.93■□□□□ 0.62
SCARF1-206ENST00000573852 VPS50Q96JG6 964 aa18.93■□□□□ 0.62
SCARF1-206ENST00000573852 ACOX2Q99424 681 aa18.93■□□□□ 0.62
SCARF1-206ENST00000573852 NANOGQ9H9S0 305 aa18.93■□□□□ 0.62
SCARF1-206ENST00000573852 FAIMQ9NVQ4 179 aa18.93■□□□□ 0.62
SCARF1-206ENST00000573852 ABI2Q9NYB9 513 aaPredicted RBP18.93■□□□□ 0.62
SCARF1-206ENST00000573852 ZNF510Q9Y2H8 683 aa18.93■□□□□ 0.62
SCARF1-206ENST00000573852 TDRD15B5MCY1 1934 aaKnown RBP18.93■□□□□ 0.62
SCARF1-206ENST00000573852 CCDC154A6NI56 674 aa18.93■□□□□ 0.62
SCARF1-206ENST00000573852 ENPP3O14638 875 aa18.93■□□□□ 0.62
SCARF1-206ENST00000573852 SLC22A3O75751 556 aa18.93■□□□□ 0.62
SCARF1-206ENST00000573852 TBX18O95935 607 aa18.93■□□□□ 0.62
SCARF1-206ENST00000573852 C1RP00736 705 aa18.93■□□□□ 0.62
SCARF1-206ENST00000573852 RPS17P08708 135 aaKnown RBP18.93■□□□□ 0.62
SCARF1-206ENST00000573852 IL12AP29459 219 aa18.93■□□□□ 0.62
SCARF1-206ENST00000573852 POLR2IP36954 125 aaKnown RBP18.93■□□□□ 0.62
SCARF1-206ENST00000573852 MAP2K5Q13163 448 aa18.93■□□□□ 0.62
SCARF1-206ENST00000573852 NEDD8Q15843 81 aa18.93■□□□□ 0.62
SCARF1-206ENST00000573852 TIGD2Q4W5G0 525 aa18.93■□□□□ 0.62
SCARF1-206ENST00000573852 RAP1GAP2Q684P5 730 aa18.93■□□□□ 0.62
SCARF1-206ENST00000573852 TMEM199Q8N511 208 aa18.93■□□□□ 0.62
SCARF1-206ENST00000573852 BRSK1Q8TDC3 778 aa18.93■□□□□ 0.62
SCARF1-206ENST00000573852 THAP11Q96EK4 314 aa18.93■□□□□ 0.62
SCARF1-206ENST00000573852 DERL2Q9GZP9 239 aa18.93■□□□□ 0.62
SCARF1-206ENST00000573852 ZNF639Q9UID6 485 aa18.93■□□□□ 0.62
SCARF1-206ENST00000573852 IGLV3-10A0A075B6K4 115 aa18.92■□□□□ 0.62
SCARF1-206ENST00000573852 TFPTP0C1Z6 253 aa18.92■□□□□ 0.62
SCARF1-206ENST00000573852 UMPSP11172 480 aa18.92■□□□□ 0.62
SCARF1-206ENST00000573852 OGNP20774 298 aaKnown RBP18.92■□□□□ 0.62
SCARF1-206ENST00000573852 EEFSECP57772 596 aaKnown RBP18.92■□□□□ 0.62
SCARF1-206ENST00000573852 EFEMP1Q12805 493 aa18.92■□□□□ 0.62
SCARF1-206ENST00000573852 DDR2Q16832 855 aa18.92■□□□□ 0.62
SCARF1-206ENST00000573852 XKR7Q5GH72 579 aa18.92■□□□□ 0.62
SCARF1-206ENST00000573852 TRIM74Q86UV6 250 aa18.92■□□□□ 0.62
SCARF1-206ENST00000573852 TRIM73Q86UV7 250 aa18.92■□□□□ 0.62
SCARF1-206ENST00000573852 MON1AQ86VX9 555 aa18.92■□□□□ 0.62
SCARF1-206ENST00000573852 COLGALT2Q8IYK4 626 aa18.92■□□□□ 0.62
SCARF1-206ENST00000573852 CHID1Q9BWS9 393 aa18.92■□□□□ 0.62
SCARF1-206ENST00000573852 GALPQ9UBC7 116 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms