RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 RANBP9Q96S59 729 aa13.43□□□□□ -0.26
RPAIN-213ENST00000573577 KRT12Q99456 494 aa13.43□□□□□ -0.26
RPAIN-213ENST00000573577 CNTNAP3Q9BZ76 1288 aa13.43□□□□□ -0.26
RPAIN-213ENST00000573577 IL22Q9GZX6 179 aa13.43□□□□□ -0.26
RPAIN-213ENST00000573577 CLPBQ9H078 707 aa13.43□□□□□ -0.26
RPAIN-213ENST00000573577 FGF22Q9HCT0 170 aa13.43□□□□□ -0.26
RPAIN-213ENST00000573577 BFARQ9NZS9 450 aa13.43□□□□□ -0.26
RPAIN-213ENST00000573577 MSRB2Q9Y3D2 182 aa13.43□□□□□ -0.26
RPAIN-213ENST00000573577 DGKBQ9Y6T7 804 aa13.43□□□□□ -0.26
RPAIN-213ENST00000573577 SMAPO00193 183 aa13.42□□□□□ -0.26
RPAIN-213ENST00000573577 LDB2O43679 373 aa13.42□□□□□ -0.26
RPAIN-213ENST00000573577 BUD23O43709 281 aaKnown RBP13.42□□□□□ -0.26
RPAIN-213ENST00000573577 TNFP01375 233 aa13.42□□□□□ -0.26
RPAIN-213ENST00000573577 ANXA6P08133 673 aa13.42□□□□□ -0.26
RPAIN-213ENST00000573577 CKMT1AP12532 417 aa13.42□□□□□ -0.26
RPAIN-213ENST00000573577 CTSEP14091 401 aa13.42□□□□□ -0.26
RPAIN-213ENST00000573577 ADRA1DP25100 572 aa13.42□□□□□ -0.26
RPAIN-213ENST00000573577 GRIA1P42261 906 aa13.42□□□□□ -0.26
RPAIN-213ENST00000573577 PTGIRP43119 386 aa13.42□□□□□ -0.26
RPAIN-213ENST00000573577 NPY2RP49146 381 aa13.42□□□□□ -0.26
RPAIN-213ENST00000573577 ZNF140P52738 457 aaPredicted RBP13.42□□□□□ -0.26
RPAIN-213ENST00000573577 TERF1P54274 439 aa13.42□□□□□ -0.26
RPAIN-213ENST00000573577 ARMC3Q5W041 872 aa13.42□□□□□ -0.26
RPAIN-213ENST00000573577 DHRS13Q6UX07 377 aa13.42□□□□□ -0.26
RPAIN-213ENST00000573577 ZNF572Q7Z3I7 529 aaPredicted RBP13.42□□□□□ -0.26
RPAIN-213ENST00000573577 PHYKPLQ8IUZ5 450 aa13.42□□□□□ -0.26
RPAIN-213ENST00000573577 PPIL6Q8IXY8 311 aa13.42□□□□□ -0.26
RPAIN-213ENST00000573577 MCUQ8NE86 351 aa13.42□□□□□ -0.26
RPAIN-213ENST00000573577 MNS1Q8NEH6 495 aa13.42□□□□□ -0.26
RPAIN-213ENST00000573577 PPHLN1Q8NEY8 458 aaKnown RBP13.42□□□□□ -0.26
RPAIN-213ENST00000573577 CPT1BQ92523 772 aa13.42□□□□□ -0.26
RPAIN-213ENST00000573577 PEX13Q92968 403 aa13.42□□□□□ -0.26
RPAIN-213ENST00000573577 APOLD1Q96LR9 279 aa13.42□□□□□ -0.26
RPAIN-213ENST00000573577 VPS35Q96QK1 796 aa13.42□□□□□ -0.26
RPAIN-213ENST00000573577 AGAP2Q99490 1192 aa13.42□□□□□ -0.26
RPAIN-213ENST00000573577 XAB2Q9HCS7 855 aaKnown RBP13.42□□□□□ -0.26
RPAIN-213ENST00000573577 IL26Q9NPH9 171 aa13.42□□□□□ -0.26
RPAIN-213ENST00000573577 EVA1BQ9NVM1 165 aa13.42□□□□□ -0.26
RPAIN-213ENST00000573577 PIH1D1Q9NWS0 290 aaKnown RBP13.42□□□□□ -0.26
RPAIN-213ENST00000573577 NCKIPSDQ9NZQ3 722 aa13.42□□□□□ -0.26
RPAIN-213ENST00000573577 RIMKLBQ9ULI2 386 aa13.42□□□□□ -0.26
RPAIN-213ENST00000573577 ARID1BQ8NFD5 2236 aaPredicted RBP13.41□□□□□ -0.26
RPAIN-213ENST00000573577 CHD8Q9HCK8 2581 aa13.41□□□□□ -0.26
RPAIN-213ENST00000573577 LY6G6EA0A0G2JKS1 128 aa13.41□□□□□ -0.26
RPAIN-213ENST00000573577 PRSS38A1L453 326 aa13.41□□□□□ -0.26
RPAIN-213ENST00000573577 FAM187AA6NFU0 413 aa13.41□□□□□ -0.26
RPAIN-213ENST00000573577 MROH6A6NGR9 719 aa13.41□□□□□ -0.26
RPAIN-213ENST00000573577 FADS2P1A8MWK0 482 aa13.41□□□□□ -0.26
RPAIN-213ENST00000573577 GPR89AB7ZAQ6 455 aa13.41□□□□□ -0.26
RPAIN-213ENST00000573577 DNALI1O14645 258 aaPredicted RBP13.41□□□□□ -0.26
RPAIN-213ENST00000573577 INPP4BO15327 924 aa13.41□□□□□ -0.26
RPAIN-213ENST00000573577 YY2O15391 372 aa13.41□□□□□ -0.26
RPAIN-213ENST00000573577 TTI1O43156 1089 aa13.41□□□□□ -0.26
RPAIN-213ENST00000573577 SLC25A14O95258 325 aaPredicted RBP13.41□□□□□ -0.26
RPAIN-213ENST00000573577 PRAMEF1O95521 474 aa13.41□□□□□ -0.26
RPAIN-213ENST00000573577 ASMTLO95671 621 aa13.41□□□□□ -0.26
RPAIN-213ENST00000573577 CELA2BP08218 269 aaPredicted RBP13.41□□□□□ -0.26
RPAIN-213ENST00000573577 GPR89BP0CG08 455 aa13.41□□□□□ -0.26
RPAIN-213ENST00000573577 MLNP12872 115 aa13.41□□□□□ -0.26
RPAIN-213ENST00000573577 SESN2P58004 480 aaPredicted RBP13.41□□□□□ -0.26
RPAIN-213ENST00000573577 SMAD1Q15797 465 aaKnown RBP13.41□□□□□ -0.26
RPAIN-213ENST00000573577 PCID2Q5JVF3 399 aa13.41□□□□□ -0.26
RPAIN-213ENST00000573577 CERCAMQ5T4B2 595 aa13.41□□□□□ -0.26
RPAIN-213ENST00000573577 FAM151BQ6UXP7 276 aa13.41□□□□□ -0.26
RPAIN-213ENST00000573577 TMPRSS7Q7RTY8 843 aa13.41□□□□□ -0.26
RPAIN-213ENST00000573577 HOOK3Q86VS8 718 aa13.41□□□□□ -0.26
RPAIN-213ENST00000573577 GALNT15Q8N3T1 639 aa13.41□□□□□ -0.26
RPAIN-213ENST00000573577 SDR16C5Q8N3Y7 309 aa13.41□□□□□ -0.26
RPAIN-213ENST00000573577 OR13C4Q8NGS5 318 aa13.41□□□□□ -0.26
RPAIN-213ENST00000573577 PTCD2Q8WV60 388 aaKnown RBP13.41□□□□□ -0.26
RPAIN-213ENST00000573577 GLYATL1Q969I3 302 aa13.41□□□□□ -0.26
RPAIN-213ENST00000573577 COX14Q96I36 57 aa13.41□□□□□ -0.26
RPAIN-213ENST00000573577 BOCQ9BWV1 1114 aa13.41□□□□□ -0.26
RPAIN-213ENST00000573577 FRMD8Q9BZ67 464 aaPredicted RBP13.41□□□□□ -0.26
RPAIN-213ENST00000573577 CYP4F12Q9HCS2 524 aa13.41□□□□□ -0.26
RPAIN-213ENST00000573577 MRPL40Q9NQ50 206 aaKnown RBP13.41□□□□□ -0.26
RPAIN-213ENST00000573577 RYDENQ9NUL5 291 aaKnown RBP13.41□□□□□ -0.26
RPAIN-213ENST00000573577 NLE1Q9NVX2 485 aaPredicted RBP13.41□□□□□ -0.26
RPAIN-213ENST00000573577 VPS18Q9P253 973 aa13.41□□□□□ -0.26
RPAIN-213ENST00000573577 MOSPD1Q9UJG1 213 aa13.41□□□□□ -0.26
RPAIN-213ENST00000573577 SLC17A4Q9Y2C5 497 aa13.41□□□□□ -0.26
RPAIN-213ENST00000573577 KCTD3Q9Y597 815 aa13.41□□□□□ -0.26
RPAIN-213ENST00000573577 U3KQA8 63 aa13.41□□□□□ -0.26
RPAIN-213ENST00000573577 TCRBV7S3A2A0A539 114 aa13.4□□□□□ -0.26
RPAIN-213ENST00000573577 H7C0S8 307 aa13.4□□□□□ -0.26
RPAIN-213ENST00000573577 SRP72O76094 671 aaKnown RBP13.4□□□□□ -0.26
RPAIN-213ENST00000573577 CEACAM5P06731 702 aa13.4□□□□□ -0.26
RPAIN-213ENST00000573577 IVLP07476 585 aa13.4□□□□□ -0.26
RPAIN-213ENST00000573577 MYF5P13349 255 aa13.4□□□□□ -0.26
RPAIN-213ENST00000573577 ITGALP20701 1170 aa13.4□□□□□ -0.26
RPAIN-213ENST00000573577 DUSP3P51452 185 aaPredicted RBP13.4□□□□□ -0.26
RPAIN-213ENST00000573577 C2orf54Q08AI8 447 aa13.4□□□□□ -0.26
RPAIN-213ENST00000573577 TCEA2Q15560 299 aa13.4□□□□□ -0.26
RPAIN-213ENST00000573577 CHRNA6Q15825 494 aa13.4□□□□□ -0.26
RPAIN-213ENST00000573577 ATP13A5Q4VNC0 1218 aa13.4□□□□□ -0.26
RPAIN-213ENST00000573577 LDLRAP1Q5SW96 308 aa13.4□□□□□ -0.26
RPAIN-213ENST00000573577 C6orf132Q5T0Z8 1188 aa13.4□□□□□ -0.26
RPAIN-213ENST00000573577 RNASEH2BQ5TBB1 312 aaKnown RBP13.4□□□□□ -0.26
RPAIN-213ENST00000573577 ANKRD22Q5VYY1 191 aa13.4□□□□□ -0.26
RPAIN-213ENST00000573577 DOK6Q6PKX4 331 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms