RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 OR8K5Q8NH50 307 aa6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 CPT1BQ92523 772 aa6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 UBXN4Q92575 508 aa6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 LMF1Q96S06 567 aa6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 DMRTA2Q96SC8 542 aa6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 HERPUD2Q9BSE4 406 aa6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 MLPHQ9BV36 600 aaPredicted RBP6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 TTYH3Q9C0H2 523 aa6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 MIS12Q9H081 205 aa6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 RAB33BQ9H082 229 aa6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 NEUROD4Q9HD90 331 aa6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 C1GALT1Q9NS00 363 aa6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 RASSF1Q9NS23 344 aa6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 DMAC2Q9NW81 257 aa6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 LRFN1Q9P244 771 aa6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 CPNE7Q9UBL6 633 aa6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 ZNF212Q9UDV6 495 aa6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 CCDC39Q9UFE4 941 aa6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 KIAA1257Q9ULG3 409 aa6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 ATP8A1Q9Y2Q0 1164 aa6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 DSCAMO60469 2012 aa6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 HEATR5AQ86XA9 2040 aa6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 SCN2AQ99250 2005 aa6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 IGLV3-10A0A075B6K4 115 aa6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 FAM237BA0A1B0GVD1 139 aa6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 SERINC4A6NH21 518 aa6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 OR5K4A6NMS3 321 aa6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 E9PLN8 166 aa6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 PHF1O43189 567 aaPredicted RBP6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 PAGE1O75459 146 aa6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 TOXO94900 526 aa6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 ZRANB2O95218 330 aaKnown RBP eCLIP6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 AMD1P17707 334 aa6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 SCNN1AP37088 669 aa6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 POLD2P49005 469 aa6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 UBE2IP63279 158 aaKnown RBP6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 TUBB4BP68371 445 aa6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 NKX6-1P78426 367 aaPredicted RBP6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 GNA12Q03113 381 aa6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 TUBB2AQ13885 445 aa6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 RRAGBQ5VZM2 374 aa6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 AFMIDQ63HM1 303 aa6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 TMEM26Q6ZUK4 368 aa6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 TFAP2DQ7Z6R9 452 aa6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 CDC20BQ86Y33 519 aa6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 NELFCDQ8IXH7 590 aa6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 ULK2Q8IYT8 1036 aa6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 CPSF7Q8N684 471 aaKnown RBP6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 ARMC2Q8NEN0 867 aa6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 ANKRD20A12PQ8NF67 263 aa6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 GOT1L1Q8NHS2 421 aaPredicted RBP6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 EEF2KMTQ96G04 330 aa6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 ZDHHC12Q96GR4 267 aa6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 EPSTI1Q96J88 318 aa6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 MAGED4Q96JG8 741 aa6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 GDAP1L1Q96MZ0 367 aa6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 VKORC1Q9BQB6 163 aa6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 GPATCH1Q9BRR8 931 aaKnown RBP6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 LLPHQ9BRT6 129 aaKnown RBP6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 BDH2Q9BUT1 245 aa6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 TUBB2BQ9BVA1 445 aa6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 TKTL2Q9H0I9 626 aa6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 SUV39H2Q9H5I1 410 aa6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 FAM204AQ9H8W3 233 aa6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 KCND1Q9NSA2 647 aa6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 DDIT4Q9NX09 232 aa6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 KCTD5Q9NXV2 234 aa6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 TBC1D29Q9UFV1 150 aa6.49□□□□□ -1.37
HERPUD1-217ENST00000569429 FREM1Q5H8C1 2179 aa6.48□□□□□ -1.37
HERPUD1-217ENST00000569429 TRAV17A0A0B4J275 112 aa6.48□□□□□ -1.37
HERPUD1-217ENST00000569429 IGHV5-51A0A0C4DH38 117 aa6.48□□□□□ -1.37
HERPUD1-217ENST00000569429 IDSB3KWA1 339 aa6.48□□□□□ -1.37
HERPUD1-217ENST00000569429 AGPSO00116 658 aa6.48□□□□□ -1.37
HERPUD1-217ENST00000569429 ARHGEF9O43307 516 aa6.48□□□□□ -1.37
HERPUD1-217ENST00000569429 ATMINO43313 823 aaPredicted RBP6.48□□□□□ -1.37
HERPUD1-217ENST00000569429 LDB2O43679 373 aa6.48□□□□□ -1.37
HERPUD1-217ENST00000569429 IGSF6O95976 241 aa6.48□□□□□ -1.37
HERPUD1-217ENST00000569429 TPOP07202 933 aa6.48□□□□□ -1.37
HERPUD1-217ENST00000569429 ELFN1P0C7U0 828 aa6.48□□□□□ -1.37
HERPUD1-217ENST00000569429 EBLN1P0CF75 366 aa6.48□□□□□ -1.37
HERPUD1-217ENST00000569429 F3P13726 295 aa6.48□□□□□ -1.37
HERPUD1-217ENST00000569429 BRAFP15056 766 aa6.48□□□□□ -1.37
HERPUD1-217ENST00000569429 IDSP22304 550 aa6.48□□□□□ -1.37
HERPUD1-217ENST00000569429 ETFBP38117 255 aa6.48□□□□□ -1.37
HERPUD1-217ENST00000569429 CAPZBP47756 277 aa6.48□□□□□ -1.37
HERPUD1-217ENST00000569429 NASPP49321 788 aaPredicted RBP6.48□□□□□ -1.37
HERPUD1-217ENST00000569429 TNFSF10P50591 281 aa6.48□□□□□ -1.37
HERPUD1-217ENST00000569429 YWHAZP63104 245 aaKnown RBP6.48□□□□□ -1.37
HERPUD1-217ENST00000569429 HMGN5P82970 282 aaKnown RBP6.48□□□□□ -1.37
HERPUD1-217ENST00000569429 CDK17Q00537 523 aa6.48□□□□□ -1.37
HERPUD1-217ENST00000569429 CBLBQ13191 982 aa6.48□□□□□ -1.37
HERPUD1-217ENST00000569429 MFAP5Q13361 173 aa6.48□□□□□ -1.37
HERPUD1-217ENST00000569429 KEAP1Q14145 624 aa6.48□□□□□ -1.37
HERPUD1-217ENST00000569429 GRM3Q14832 879 aa6.48□□□□□ -1.37
HERPUD1-217ENST00000569429 SYCP1Q15431 976 aa6.48□□□□□ -1.37
HERPUD1-217ENST00000569429 CNGA2Q16280 664 aa6.48□□□□□ -1.37
HERPUD1-217ENST00000569429 CYP2A13Q16696 494 aa6.48□□□□□ -1.37
HERPUD1-217ENST00000569429 KRTAP24-1Q3LI83 254 aa6.48□□□□□ -1.37
HERPUD1-217ENST00000569429 PLA2G4EQ3MJ16 856 aa6.48□□□□□ -1.37
HERPUD1-217ENST00000569429 PDLIM3Q53GG5 364 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms