RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 HAUS2Q9NVX0 235 aa9.13□□□□□ -0.95
CDH13-210ENST00000567445 AMACRQ9UHK6 382 aa9.13□□□□□ -0.95
CDH13-210ENST00000567445 DNPEPQ9ULA0 475 aa9.13□□□□□ -0.95
CDH13-210ENST00000567445 TMEM98Q9Y2Y6 226 aa9.13□□□□□ -0.95
CDH13-210ENST00000567445 IGHV1OR21-1A0A087WYE8 117 aa9.12□□□□□ -0.95
CDH13-210ENST00000567445 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.12□□□□□ -0.95
CDH13-210ENST00000567445 CCL4P13236 92 aa9.12□□□□□ -0.95
CDH13-210ENST00000567445 CA4P22748 312 aa9.12□□□□□ -0.95
CDH13-210ENST00000567445 CCNCP24863 283 aa9.12□□□□□ -0.95
CDH13-210ENST00000567445 STC1P52823 247 aa9.12□□□□□ -0.95
CDH13-210ENST00000567445 LIMK2P53671 638 aa9.12□□□□□ -0.95
CDH13-210ENST00000567445 UBASH3AP57075 661 aa9.12□□□□□ -0.95
CDH13-210ENST00000567445 RPL26P61254 145 aaKnown RBP9.12□□□□□ -0.95
CDH13-210ENST00000567445 TPM4P67936 248 aa9.12□□□□□ -0.95
CDH13-210ENST00000567445 DSC2Q02487 901 aa9.12□□□□□ -0.95
CDH13-210ENST00000567445 SQSTM1Q13501 440 aa9.12□□□□□ -0.95
CDH13-210ENST00000567445 TRA2AQ13595 282 aaKnown RBP eCLIP9.12□□□□□ -0.95
CDH13-210ENST00000567445 LRP8Q14114 963 aa9.12□□□□□ -0.95
CDH13-210ENST00000567445 DPYSL3Q14195 570 aa9.12□□□□□ -0.95
CDH13-210ENST00000567445 IHHQ14623 411 aa9.12□□□□□ -0.95
CDH13-210ENST00000567445 PDK2Q15119 407 aa9.12□□□□□ -0.95
CDH13-210ENST00000567445 IFI16Q16666 785 aaKnown RBP9.12□□□□□ -0.95
CDH13-210ENST00000567445 LINC00303Q3SY05 128 aa9.12□□□□□ -0.95
CDH13-210ENST00000567445 PYCR3Q53H96 274 aa9.12□□□□□ -0.95
CDH13-210ENST00000567445 ANKRD20A8PQ5CZ79 823 aa9.12□□□□□ -0.95
CDH13-210ENST00000567445 NKAIN2Q5VXU1 208 aa9.12□□□□□ -0.95
CDH13-210ENST00000567445 NCBP2-AS2Q69YL0 99 aa9.12□□□□□ -0.95
CDH13-210ENST00000567445 ALKBH5Q6P6C2 394 aaKnown RBP9.12□□□□□ -0.95
CDH13-210ENST00000567445 TRIM74Q86UV6 250 aa9.12□□□□□ -0.95
CDH13-210ENST00000567445 VASH2Q86V25 355 aa9.12□□□□□ -0.95
CDH13-210ENST00000567445 LUZP1Q86V48 1076 aa9.12□□□□□ -0.95
CDH13-210ENST00000567445 MAP7D3Q8IWC1 876 aa9.12□□□□□ -0.95
CDH13-210ENST00000567445 RAVER1Q8IY67 606 aaKnown RBP9.12□□□□□ -0.95
CDH13-210ENST00000567445 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.12□□□□□ -0.95
CDH13-210ENST00000567445 EXD3Q8N9H8 876 aa9.12□□□□□ -0.95
CDH13-210ENST00000567445 OR4D9Q8NGE8 314 aa9.12□□□□□ -0.95
CDH13-210ENST00000567445 EXD1Q8NHP7 514 aa9.12□□□□□ -0.95
CDH13-210ENST00000567445 ZNF564Q8TBZ8 553 aaPredicted RBP9.12□□□□□ -0.95
CDH13-210ENST00000567445 CPLX3Q8WVH0 158 aa9.12□□□□□ -0.95
CDH13-210ENST00000567445 TSGA13Q96PP4 275 aa9.12□□□□□ -0.95
CDH13-210ENST00000567445 SMIM14Q96QK8 99 aa9.12□□□□□ -0.95
CDH13-210ENST00000567445 TAAR9Q96RI9 348 aa9.12□□□□□ -0.95
CDH13-210ENST00000567445 DPYSL5Q9BPU6 564 aa9.12□□□□□ -0.95
CDH13-210ENST00000567445 ZNF670Q9BS34 389 aa9.12□□□□□ -0.95
CDH13-210ENST00000567445 RIOK2Q9BVS4 552 aaKnown RBP9.12□□□□□ -0.95
CDH13-210ENST00000567445 TDRD1Q9BXT4 1180 aaKnown RBP9.12□□□□□ -0.95
CDH13-210ENST00000567445 ACBD3Q9H3P7 528 aa9.12□□□□□ -0.95
CDH13-210ENST00000567445 RBM22Q9NW64 420 aaKnown RBP eCLIP9.12□□□□□ -0.95
CDH13-210ENST00000567445 KCNK4Q9NYG8 393 aa9.12□□□□□ -0.95
CDH13-210ENST00000567445 CAPN11Q9UMQ6 739 aa9.12□□□□□ -0.95
CDH13-210ENST00000567445 RPL26L1Q9UNX3 145 aaKnown RBP9.12□□□□□ -0.95
CDH13-210ENST00000567445 CHKBQ9Y259 395 aa9.12□□□□□ -0.95
CDH13-210ENST00000567445 LUC7L2Q9Y383 392 aaKnown RBP9.12□□□□□ -0.95
CDH13-210ENST00000567445 PLEKHM1Q9Y4G2 1056 aa9.12□□□□□ -0.95
CDH13-210ENST00000567445 TTLL3Q9Y4R7 772 aa9.12□□□□□ -0.95
CDH13-210ENST00000567445 ZFC3H1O60293 1989 aaKnown RBP9.12□□□□□ -0.95
CDH13-210ENST00000567445 TLN1Q9Y490 2541 aaKnown RBP9.12□□□□□ -0.95
CDH13-210ENST00000567445 SDK2Q58EX2 2172 aa9.12□□□□□ -0.95
CDH13-210ENST00000567445 STMND1H3BQB6 276 aa9.11□□□□□ -0.95
CDH13-210ENST00000567445 INPP4BO15327 924 aa9.11□□□□□ -0.95
CDH13-210ENST00000567445 SLC28A2O43868 658 aa9.11□□□□□ -0.95
CDH13-210ENST00000567445 PRLP01236 227 aa9.11□□□□□ -0.95
CDH13-210ENST00000567445 THRAP10827 490 aa9.11□□□□□ -0.95
CDH13-210ENST00000567445 FGF3P11487 239 aaPredicted RBP9.11□□□□□ -0.95
CDH13-210ENST00000567445 MX2P20592 715 aa9.11□□□□□ -0.95
CDH13-210ENST00000567445 CSF2RBP32927 897 aa9.11□□□□□ -0.95
CDH13-210ENST00000567445 GJC1P36383 396 aa9.11□□□□□ -0.95
CDH13-210ENST00000567445 FASLGP48023 281 aa9.11□□□□□ -0.95
CDH13-210ENST00000567445 GPLD1P80108 840 aa9.11□□□□□ -0.95
CDH13-210ENST00000567445 ATP13A4Q4VNC1 1196 aa9.11□□□□□ -0.95
CDH13-210ENST00000567445 OXLD1Q5BKU9 147 aa9.11□□□□□ -0.95
CDH13-210ENST00000567445 MARK2Q7KZI7 788 aaKnown RBP9.11□□□□□ -0.95
CDH13-210ENST00000567445 GALNT13Q8IUC8 556 aa9.11□□□□□ -0.95
CDH13-210ENST00000567445 SFRP1Q8N474 314 aa9.11□□□□□ -0.95
CDH13-210ENST00000567445 KCTD6Q8NC69 237 aa9.11□□□□□ -0.95
CDH13-210ENST00000567445 AGBL5Q8NDL9 886 aa9.11□□□□□ -0.95
CDH13-210ENST00000567445 CCDC112Q8NEF3 446 aa9.11□□□□□ -0.95
CDH13-210ENST00000567445 LPCAT1Q8NF37 534 aa9.11□□□□□ -0.95
CDH13-210ENST00000567445 ARRDC2Q8TBH0 407 aa9.11□□□□□ -0.95
CDH13-210ENST00000567445 EXTL1Q92935 676 aa9.11□□□□□ -0.95
CDH13-210ENST00000567445 COX14Q96I36 57 aa9.11□□□□□ -0.95
CDH13-210ENST00000567445 LYSMD1Q96S90 227 aa9.11□□□□□ -0.95
CDH13-210ENST00000567445 AGAP2Q99490 1192 aa9.11□□□□□ -0.95
CDH13-210ENST00000567445 CBX8Q9HC52 389 aa9.11□□□□□ -0.95
CDH13-210ENST00000567445 VPS18Q9P253 973 aa9.11□□□□□ -0.95
CDH13-210ENST00000567445 PCDHGA3Q9Y5H0 932 aa9.11□□□□□ -0.95
CDH13-210ENST00000567445 PCDHGA11Q9Y5H2 935 aa9.11□□□□□ -0.95
CDH13-210ENST00000567445 C1orf232A0A0U1RR37 186 aa9.1□□□□□ -0.95
CDH13-210ENST00000567445 PROSCO94903 275 aa9.1□□□□□ -0.95
CDH13-210ENST00000567445 MAP3K6O95382 1288 aa9.1□□□□□ -0.95
CDH13-210ENST00000567445 CLDN7O95471 211 aa9.1□□□□□ -0.95
CDH13-210ENST00000567445 ASMTLO95671 621 aa9.1□□□□□ -0.95
CDH13-210ENST00000567445 HLA-DQB2P05538 268 aa9.1□□□□□ -0.95
CDH13-210ENST00000567445 KRT7P08729 469 aa9.1□□□□□ -0.95
CDH13-210ENST00000567445 SFTPCP11686 197 aa9.1□□□□□ -0.95
CDH13-210ENST00000567445 WT1P19544 449 aaPredicted RBP9.1□□□□□ -0.95
CDH13-210ENST00000567445 CSTF2P33240 577 aaKnown RBP eCLIP9.1□□□□□ -0.95
CDH13-210ENST00000567445 GBE1Q04446 702 aa9.1□□□□□ -0.95
CDH13-210ENST00000567445 NIPAL4Q0D2K0 466 aa9.1□□□□□ -0.95
CDH13-210ENST00000567445 NFATC3Q12968 1075 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms