RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 PAPD4Q6PIY7 484 aaKnown RBP5.53□□□□□ -1.52
LINC00557-201ENST00000563184 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.53□□□□□ -1.52
LINC00557-201ENST00000563184 KBTBD6Q86V97 674 aa5.53□□□□□ -1.52
LINC00557-201ENST00000563184 GLCCI1Q86VQ1 547 aa5.53□□□□□ -1.52
LINC00557-201ENST00000563184 SCYL3Q8IZE3 742 aa5.53□□□□□ -1.52
LINC00557-201ENST00000563184 CCDC89Q8N998 374 aa5.53□□□□□ -1.52
LINC00557-201ENST00000563184 SMRP1Q8NCR6 262 aa5.53□□□□□ -1.52
LINC00557-201ENST00000563184 OR5R1Q8NH85 324 aa5.53□□□□□ -1.52
LINC00557-201ENST00000563184 DUSP19Q8WTR2 217 aa5.53□□□□□ -1.52
LINC00557-201ENST00000563184 SLC22A18Q96BI1 424 aa5.53□□□□□ -1.52
LINC00557-201ENST00000563184 CCDC34Q96HJ3 373 aa5.53□□□□□ -1.52
LINC00557-201ENST00000563184 TMEM204Q9BSN7 226 aa5.53□□□□□ -1.52
LINC00557-201ENST00000563184 GAREM1Q9H706 876 aa5.53□□□□□ -1.52
LINC00557-201ENST00000563184 PTRH2Q9Y3E5 179 aaKnown RBP5.53□□□□□ -1.52
LINC00557-201ENST00000563184 LOXL2Q9Y4K0 774 aa5.53□□□□□ -1.52
LINC00557-201ENST00000563184 IGLV5-37A0A075B6J1 123 aa5.52□□□□□ -1.53
LINC00557-201ENST00000563184 INSIG1O15503 277 aa5.52□□□□□ -1.53
LINC00557-201ENST00000563184 FIBPO43427 364 aa5.52□□□□□ -1.53
LINC00557-201ENST00000563184 PLPP2O43688 288 aa5.52□□□□□ -1.53
LINC00557-201ENST00000563184 TMCC2O75069 709 aa5.52□□□□□ -1.53
LINC00557-201ENST00000563184 ADRB2P07550 413 aa5.52□□□□□ -1.53
LINC00557-201ENST00000563184 NR2F1P10589 423 aa5.52□□□□□ -1.53
LINC00557-201ENST00000563184 MMP9P14780 707 aa5.52□□□□□ -1.53
LINC00557-201ENST00000563184 S1PR1P21453 382 aa5.52□□□□□ -1.53
LINC00557-201ENST00000563184 PNLIPRP2P54317 469 aa5.52□□□□□ -1.53
LINC00557-201ENST00000563184 CLDN20P56880 219 aa5.52□□□□□ -1.53
LINC00557-201ENST00000563184 SEC61A1P61619 476 aaKnown RBP5.52□□□□□ -1.53
LINC00557-201ENST00000563184 KIF5AQ12840 1032 aa5.52□□□□□ -1.53
LINC00557-201ENST00000563184 CALCRLQ16602 461 aa5.52□□□□□ -1.53
LINC00557-201ENST00000563184 C18orf63Q68DL7 685 aa5.52□□□□□ -1.53
LINC00557-201ENST00000563184 RASGEF1CQ8N431 466 aa5.52□□□□□ -1.53
LINC00557-201ENST00000563184 TANKQ92844 425 aa5.52□□□□□ -1.53
LINC00557-201ENST00000563184 OR1F2PQ96R84 312 aa5.52□□□□□ -1.53
LINC00557-201ENST00000563184 GFI1Q99684 422 aa5.52□□□□□ -1.53
LINC00557-201ENST00000563184 TEX12Q9BXU0 123 aa5.52□□□□□ -1.53
LINC00557-201ENST00000563184 CHORDC1Q9UHD1 332 aaPredicted RBP5.52□□□□□ -1.53
LINC00557-201ENST00000563184 TMEM184BQ9Y519 407 aaPredicted RBP5.52□□□□□ -1.53
LINC00557-201ENST00000563184 TMEM8BA6NDV4 472 aa5.51□□□□□ -1.53
LINC00557-201ENST00000563184 EIF4E1BA6NMX2 242 aaKnown RBP5.51□□□□□ -1.53
LINC00557-201ENST00000563184 A8MV72 311 aaPredicted RBP5.51□□□□□ -1.53
LINC00557-201ENST00000563184 ANKRD28O15084 1053 aa5.51□□□□□ -1.53
LINC00557-201ENST00000563184 ADAMDEC1O15204 470 aa5.51□□□□□ -1.53
LINC00557-201ENST00000563184 ADAM20O43506 726 aa5.51□□□□□ -1.53
LINC00557-201ENST00000563184 PMS2P2O95744 297 aa5.51□□□□□ -1.53
LINC00557-201ENST00000563184 AFPP02771 609 aaKnown RBP5.51□□□□□ -1.53
LINC00557-201ENST00000563184 CORO1AP31146 461 aaKnown RBP5.51□□□□□ -1.53
LINC00557-201ENST00000563184 NNMTP40261 264 aa5.51□□□□□ -1.53
LINC00557-201ENST00000563184 HSD17B4P51659 736 aa5.51□□□□□ -1.53
LINC00557-201ENST00000563184 TUBA1BP68363 451 aa5.51□□□□□ -1.53
LINC00557-201ENST00000563184 DLG1Q12959 904 aa5.51□□□□□ -1.53
LINC00557-201ENST00000563184 KCNC3Q14003 757 aa5.51□□□□□ -1.53
LINC00557-201ENST00000563184 MYLK3Q32MK0 819 aa5.51□□□□□ -1.53
LINC00557-201ENST00000563184 CFAP58Q5T655 872 aa5.51□□□□□ -1.53
LINC00557-201ENST00000563184 CCNI2Q6ZMN8 369 aaPredicted RBP5.51□□□□□ -1.53
LINC00557-201ENST00000563184 KRBA2Q6ZNG9 492 aa5.51□□□□□ -1.53
LINC00557-201ENST00000563184 SPATA2LQ8IUW3 424 aaPredicted RBP5.51□□□□□ -1.53
LINC00557-201ENST00000563184 ARID3BQ8IVW6 561 aaPredicted RBP5.51□□□□□ -1.53
LINC00557-201ENST00000563184 SAMD14Q8IZD0 417 aaPredicted RBP5.51□□□□□ -1.53
LINC00557-201ENST00000563184 MAGEC3Q8TD91 643 aa5.51□□□□□ -1.53
LINC00557-201ENST00000563184 JAKMIP2Q96AA8 810 aa5.51□□□□□ -1.53
LINC00557-201ENST00000563184 MTBPQ96DY7 904 aa5.51□□□□□ -1.53
LINC00557-201ENST00000563184 LYZL4Q96KX0 146 aa5.51□□□□□ -1.53
LINC00557-201ENST00000563184 SERINC2Q96SA4 455 aa5.51□□□□□ -1.53
LINC00557-201ENST00000563184 PAFAH2Q99487 392 aa5.51□□□□□ -1.53
LINC00557-201ENST00000563184 MTERF1Q99551 399 aaKnown RBP5.51□□□□□ -1.53
LINC00557-201ENST00000563184 WACQ9BTA9 647 aa5.51□□□□□ -1.53
LINC00557-201ENST00000563184 SMARCAL1Q9NZC9 954 aa5.51□□□□□ -1.53
LINC00557-201ENST00000563184 ZNF224Q9NZL3 707 aa5.51□□□□□ -1.53
LINC00557-201ENST00000563184 DNAJB4Q9UDY4 337 aa5.51□□□□□ -1.53
LINC00557-201ENST00000563184 SIX4Q9UIU6 781 aa5.51□□□□□ -1.53
LINC00557-201ENST00000563184 FBXL2Q9UKC9 423 aa5.51□□□□□ -1.53
LINC00557-201ENST00000563184 PLAGL1Q9UM63 463 aa5.51□□□□□ -1.53
LINC00557-201ENST00000563184 PDS5AQ29RF7 1337 aaKnown RBP5.5□□□□□ -1.53
LINC00557-201ENST00000563184 A0A1W2PP11 408 aa5.5□□□□□ -1.53
LINC00557-201ENST00000563184 LNP1A1A4G5 178 aa5.5□□□□□ -1.53
LINC00557-201ENST00000563184 ZNF587BE7ETH6 402 aa5.5□□□□□ -1.53
LINC00557-201ENST00000563184 SH2B2O14492 632 aaPredicted RBP5.5□□□□□ -1.53
LINC00557-201ENST00000563184 KCNN4O15554 427 aa5.5□□□□□ -1.53
LINC00557-201ENST00000563184 PPP1R3DO95685 299 aa5.5□□□□□ -1.53
LINC00557-201ENST00000563184 TRIM21P19474 475 aaKnown RBP5.5□□□□□ -1.53
LINC00557-201ENST00000563184 TNFRSF8P28908 595 aa5.5□□□□□ -1.53
LINC00557-201ENST00000563184 DSCR9P59020 149 aa5.5□□□□□ -1.53
LINC00557-201ENST00000563184 CXCL9Q07325 125 aa5.5□□□□□ -1.53
LINC00557-201ENST00000563184 NTRK2Q16620 822 aa5.5□□□□□ -1.53
LINC00557-201ENST00000563184 KRTCAP3Q53RY4 240 aa5.5□□□□□ -1.53
LINC00557-201ENST00000563184 PDXDC1Q6P996 788 aa5.5□□□□□ -1.53
LINC00557-201ENST00000563184 RBM23Q86U06 439 aaKnown RBP5.5□□□□□ -1.53
LINC00557-201ENST00000563184 CCDC190Q86UF4 302 aa5.5□□□□□ -1.53
LINC00557-201ENST00000563184 SATL1Q86VE3 508 aa5.5□□□□□ -1.53
LINC00557-201ENST00000563184 EPHX4Q8IUS5 362 aa5.5□□□□□ -1.53
LINC00557-201ENST00000563184 CEP97Q8IW35 865 aa5.5□□□□□ -1.53
LINC00557-201ENST00000563184 MCEMP1Q8IX19 187 aa5.5□□□□□ -1.53
LINC00557-201ENST00000563184 C1orf87Q8N0U7 546 aa5.5□□□□□ -1.53
LINC00557-201ENST00000563184 RBMXL3Q8N7X1 1067 aaKnown RBP5.5□□□□□ -1.53
LINC00557-201ENST00000563184 LSMEM1Q8N8F7 131 aa5.5□□□□□ -1.53
LINC00557-201ENST00000563184 SLC38A9Q8NBW4 561 aa5.5□□□□□ -1.53
LINC00557-201ENST00000563184 SLC44A1Q8WWI5 657 aa5.5□□□□□ -1.53
LINC00557-201ENST00000563184 CEP295NLQ96MC4 621 aa5.5□□□□□ -1.53
LINC00557-201ENST00000563184 NUDCD1Q96RS6 583 aa5.5□□□□□ -1.53
LINC00557-201ENST00000563184 SMC6Q96SB8 1091 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms