RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 OGFOD3Q6PK18 319 aa13.76□□□□□ -0.21
TPM1-230ENST00000561266 SLC30A9Q6PML9 568 aa13.76□□□□□ -0.21
TPM1-230ENST00000561266 ZNF547Q8IVP9 402 aa13.76□□□□□ -0.21
TPM1-230ENST00000561266 FAM46DQ8NEK8 389 aa13.76□□□□□ -0.21
TPM1-230ENST00000561266 GPR156Q8NFN8 814 aa13.76□□□□□ -0.21
TPM1-230ENST00000561266 ACTRT1Q8TDG2 376 aa13.76□□□□□ -0.21
TPM1-230ENST00000561266 MAIP1Q8WWC4 291 aa13.76□□□□□ -0.21
TPM1-230ENST00000561266 DNAJC1Q96KC8 554 aaKnown RBP13.76□□□□□ -0.21
TPM1-230ENST00000561266 SRPK1Q96SB4 655 aaKnown RBP13.76□□□□□ -0.21
TPM1-230ENST00000561266 ZSCAN5AQ9BUG6 496 aa13.76□□□□□ -0.21
TPM1-230ENST00000561266 DUSP23Q9BVJ7 150 aa13.76□□□□□ -0.21
TPM1-230ENST00000561266 FAM96AQ9H5X1 160 aa13.76□□□□□ -0.21
TPM1-230ENST00000561266 TRIM39Q9HCM9 518 aa13.76□□□□□ -0.21
TPM1-230ENST00000561266 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.76□□□□□ -0.21
TPM1-230ENST00000561266 TAAR2Q9P1P5 351 aa13.76□□□□□ -0.21
TPM1-230ENST00000561266 ZNHIT2Q9UHR6 403 aa13.76□□□□□ -0.21
TPM1-230ENST00000561266 PCDHGA1Q9Y5H4 931 aa13.76□□□□□ -0.21
TPM1-230ENST00000561266 PIKFYVEQ9Y2I7 2098 aa13.76□□□□□ -0.21
TPM1-230ENST00000561266 CEP295Q9C0D2 2601 aa13.76□□□□□ -0.21
TPM1-230ENST00000561266 TPRP12270 2363 aaKnown RBP13.75□□□□□ -0.21
TPM1-230ENST00000561266 EME2A4GXA9 379 aaPredicted RBP13.75□□□□□ -0.21
TPM1-230ENST00000561266 FAM221BA6H8Z2 402 aa13.75□□□□□ -0.21
TPM1-230ENST00000561266 CHUKO15111 745 aa13.75□□□□□ -0.21
TPM1-230ENST00000561266 STX7O15400 261 aaKnown RBP13.75□□□□□ -0.21
TPM1-230ENST00000561266 NUAK1O60285 661 aa13.75□□□□□ -0.21
TPM1-230ENST00000561266 ZNF189O75820 626 aaPredicted RBP13.75□□□□□ -0.21
TPM1-230ENST00000561266 PYGLP06737 847 aa13.75□□□□□ -0.21
TPM1-230ENST00000561266 FDFT1P37268 417 aa13.75□□□□□ -0.21
TPM1-230ENST00000561266 COILP38432 576 aaPredicted RBP13.75□□□□□ -0.21
TPM1-230ENST00000561266 ARSDP51689 593 aa13.75□□□□□ -0.21
TPM1-230ENST00000561266 TERF1P54274 439 aa13.75□□□□□ -0.21
TPM1-230ENST00000561266 MAZP56270 477 aaKnown RBP13.75□□□□□ -0.21
TPM1-230ENST00000561266 INSM1Q01101 510 aaPredicted RBP13.75□□□□□ -0.21
TPM1-230ENST00000561266 FOXK2Q01167 660 aa13.75□□□□□ -0.21
TPM1-230ENST00000561266 SMAD1Q15797 465 aaKnown RBP13.75□□□□□ -0.21
TPM1-230ENST00000561266 PAPD7Q5XG87 772 aaKnown RBP13.75□□□□□ -0.21
TPM1-230ENST00000561266 LVRNQ6Q4G3 990 aa13.75□□□□□ -0.21
TPM1-230ENST00000561266 TMPRSS7Q7RTY8 843 aa13.75□□□□□ -0.21
TPM1-230ENST00000561266 EFL1Q7Z2Z2 1120 aaKnown RBP13.75□□□□□ -0.21
TPM1-230ENST00000561266 GKN2Q86XP6 184 aa13.75□□□□□ -0.21
TPM1-230ENST00000561266 CCDC89Q8N998 374 aa13.75□□□□□ -0.21
TPM1-230ENST00000561266 IFI44Q8TCB0 444 aa13.75□□□□□ -0.21
TPM1-230ENST00000561266 MAGOHBQ96A72 148 aaKnown RBP13.75□□□□□ -0.21
TPM1-230ENST00000561266 ZNF778Q96MU6 729 aa13.75□□□□□ -0.21
TPM1-230ENST00000561266 OR2M4Q96R27 311 aa13.75□□□□□ -0.21
TPM1-230ENST00000561266 CASS4Q9NQ75 786 aa13.75□□□□□ -0.21
TPM1-230ENST00000561266 RAD18Q9NS91 495 aa13.75□□□□□ -0.21
TPM1-230ENST00000561266 TRNAU1APQ9NX07 287 aaKnown RBP13.75□□□□□ -0.21
TPM1-230ENST00000561266 VPS18Q9P253 973 aa13.75□□□□□ -0.21
TPM1-230ENST00000561266 PAK5Q9P286 719 aa13.75□□□□□ -0.21
TPM1-230ENST00000561266 SLC2A6Q9UGQ3 507 aa13.75□□□□□ -0.21
TPM1-230ENST00000561266 PADI4Q9UM07 663 aa13.75□□□□□ -0.21
TPM1-230ENST00000561266 DOLKQ9UPQ8 538 aa13.75□□□□□ -0.21
TPM1-230ENST00000561266 ASPMQ8IZT6 3477 aa13.74□□□□□ -0.21
TPM1-230ENST00000561266 WDFY3Q8IZQ1 3526 aa13.74□□□□□ -0.21
TPM1-230ENST00000561266 TRBV23OR9-2A0A075B6M9 112 aa13.74□□□□□ -0.21
TPM1-230ENST00000561266 GLYATL1P3A0A0U1RQE8 302 aa13.74□□□□□ -0.21
TPM1-230ENST00000561266 MROH6A6NGR9 719 aa13.74□□□□□ -0.21
TPM1-230ENST00000561266 B4DGG1 531 aa13.74□□□□□ -0.21
TPM1-230ENST00000561266 PGRMC1O00264 195 aaKnown RBP13.74□□□□□ -0.21
TPM1-230ENST00000561266 PSMD3O43242 534 aa13.74□□□□□ -0.21
TPM1-230ENST00000561266 TNNT3P45378 269 aaPredicted RBP13.74□□□□□ -0.21
TPM1-230ENST00000561266 VPS41P49754 854 aa13.74□□□□□ -0.21
TPM1-230ENST00000561266 NR0B2Q15466 257 aa13.74□□□□□ -0.21
TPM1-230ENST00000561266 PLA2G4EQ3MJ16 856 aa13.74□□□□□ -0.21
TPM1-230ENST00000561266 ANKRD22Q5VYY1 191 aa13.74□□□□□ -0.21
TPM1-230ENST00000561266 PDPK2PQ6A1A2 396 aa13.74□□□□□ -0.21
TPM1-230ENST00000561266 CRTC3Q6UUV7 619 aa13.74□□□□□ -0.21
TPM1-230ENST00000561266 ZNF534Q76KX8 674 aa13.74□□□□□ -0.21
TPM1-230ENST00000561266 CHST15Q7LFX5 561 aaPredicted RBP13.74□□□□□ -0.21
TPM1-230ENST00000561266 C11orf96Q7Z7L8 435 aa13.74□□□□□ -0.21
TPM1-230ENST00000561266 C17orf82Q86X59 251 aaPredicted RBP13.74□□□□□ -0.21
TPM1-230ENST00000561266 CREG2Q8IUH2 290 aa13.74□□□□□ -0.21
TPM1-230ENST00000561266 NAGSQ8N159 534 aa13.74□□□□□ -0.21
TPM1-230ENST00000561266 RASGEF1AQ8N9B8 481 aa13.74□□□□□ -0.21
TPM1-230ENST00000561266 DTX3LQ8TDB6 740 aa13.74□□□□□ -0.21
TPM1-230ENST00000561266 PPP1R2P1Q96PQ5 205 aa13.74□□□□□ -0.21
TPM1-230ENST00000561266 VPS35Q96QK1 796 aa13.74□□□□□ -0.21
TPM1-230ENST00000561266 CDH19Q9H159 772 aa13.74□□□□□ -0.21
TPM1-230ENST00000561266 DPEP2Q9H4A9 486 aa13.74□□□□□ -0.21
TPM1-230ENST00000561266 KCND1Q9NSA2 647 aa13.74□□□□□ -0.21
TPM1-230ENST00000561266 ANGPTL2Q9UKU9 493 aa13.74□□□□□ -0.21
TPM1-230ENST00000561266 KCNK6Q9Y257 313 aa13.74□□□□□ -0.21
TPM1-230ENST00000561266 PKP3Q9Y446 797 aa13.74□□□□□ -0.21
TPM1-230ENST00000561266 OR51F1A6NGY5 319 aa13.73□□□□□ -0.21
TPM1-230ENST00000561266 PRR19A6NJB7 356 aa13.73□□□□□ -0.21
TPM1-230ENST00000561266 C2orf81A6NN90 581 aa13.73□□□□□ -0.21
TPM1-230ENST00000561266 GRID2O43424 1007 aa13.73□□□□□ -0.21
TPM1-230ENST00000561266 SGTAO43765 313 aa13.73□□□□□ -0.21
TPM1-230ENST00000561266 OPA1O60313 960 aa13.73□□□□□ -0.21
TPM1-230ENST00000561266 SRP72O76094 671 aaKnown RBP13.73□□□□□ -0.21
TPM1-230ENST00000561266 TRIM16O95361 564 aa13.73□□□□□ -0.21
TPM1-230ENST00000561266 PRAMEF1O95521 474 aa13.73□□□□□ -0.21
TPM1-230ENST00000561266 KRT14P02533 472 aa13.73□□□□□ -0.21
TPM1-230ENST00000561266 APRTP07741 180 aa13.73□□□□□ -0.21
TPM1-230ENST00000561266 ACP5P13686 325 aa13.73□□□□□ -0.21
TPM1-230ENST00000561266 PSMA3P25788 255 aa13.73□□□□□ -0.21
TPM1-230ENST00000561266 ACTR1BP42025 376 aa13.73□□□□□ -0.21
TPM1-230ENST00000561266 CTSCP53634 463 aa13.73□□□□□ -0.21
TPM1-230ENST00000561266 ACTR1AP61163 376 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms