RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 CHRNA6Q15825 494 aa10.58□□□□□ -0.72
LINC00239-201ENST00000556973 CYP1B1Q16678 543 aa10.58□□□□□ -0.72
LINC00239-201ENST00000556973 PAPD7Q5XG87 772 aaKnown RBP10.58□□□□□ -0.72
LINC00239-201ENST00000556973 DHRS13Q6UX07 377 aa10.58□□□□□ -0.72
LINC00239-201ENST00000556973 FAM151BQ6UXP7 276 aa10.58□□□□□ -0.72
LINC00239-201ENST00000556973 CHST15Q7LFX5 561 aaPredicted RBP10.58□□□□□ -0.72
LINC00239-201ENST00000556973 TMPRSS12Q86WS5 348 aa10.58□□□□□ -0.72
LINC00239-201ENST00000556973 NRROSQ86YC3 692 aa10.58□□□□□ -0.72
LINC00239-201ENST00000556973 SLC35F3Q8IY50 421 aa10.58□□□□□ -0.72
LINC00239-201ENST00000556973 DNAAF3Q8N9W5 541 aa10.58□□□□□ -0.72
LINC00239-201ENST00000556973 GPR156Q8NFN8 814 aa10.58□□□□□ -0.72
LINC00239-201ENST00000556973 OR6C4Q8NGE1 309 aa10.58□□□□□ -0.72
LINC00239-201ENST00000556973 IFI44Q8TCB0 444 aa10.58□□□□□ -0.72
LINC00239-201ENST00000556973 ZNF398Q8TD17 642 aa10.58□□□□□ -0.72
LINC00239-201ENST00000556973 OR2M4Q96R27 311 aa10.58□□□□□ -0.72
LINC00239-201ENST00000556973 ABCG4Q9H172 646 aa10.58□□□□□ -0.72
LINC00239-201ENST00000556973 OR2AG1Q9H205 316 aa10.58□□□□□ -0.72
LINC00239-201ENST00000556973 SUDS3Q9H7L9 328 aaPredicted RBP10.58□□□□□ -0.72
LINC00239-201ENST00000556973 MSRB2Q9Y3D2 182 aa10.58□□□□□ -0.72
LINC00239-201ENST00000556973 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.58□□□□□ -0.72
LINC00239-201ENST00000556973 U3KQA8 63 aa10.58□□□□□ -0.72
LINC00239-201ENST00000556973 MYLKQ15746 1914 aa10.58□□□□□ -0.72
LINC00239-201ENST00000556973 PLXNB3Q9ULL4 1909 aa10.58□□□□□ -0.72
LINC00239-201ENST00000556973 ZFC3H1O60293 1989 aaKnown RBP10.57□□□□□ -0.72
LINC00239-201ENST00000556973 GOLGA6L10A0A0M3HER8 536 aa10.57□□□□□ -0.72
LINC00239-201ENST00000556973 GAPDHSO14556 408 aaPredicted RBP10.57□□□□□ -0.72
LINC00239-201ENST00000556973 CHUKO15111 745 aa10.57□□□□□ -0.72
LINC00239-201ENST00000556973 UGT1A9O60656 530 aa10.57□□□□□ -0.72
LINC00239-201ENST00000556973 SRP72O76094 671 aaKnown RBP10.57□□□□□ -0.72
LINC00239-201ENST00000556973 CDK14O94921 469 aa10.57□□□□□ -0.72
LINC00239-201ENST00000556973 APRTP07741 180 aa10.57□□□□□ -0.72
LINC00239-201ENST00000556973 UGT1A6P19224 532 aa10.57□□□□□ -0.72
LINC00239-201ENST00000556973 UGT1A1P22309 533 aa10.57□□□□□ -0.72
LINC00239-201ENST00000556973 UGT1A4P22310 534 aa10.57□□□□□ -0.72
LINC00239-201ENST00000556973 AK4P27144 223 aaPredicted RBP10.57□□□□□ -0.72
LINC00239-201ENST00000556973 UGT1A3P35503 534 aa10.57□□□□□ -0.72
LINC00239-201ENST00000556973 UGT1A5P35504 534 aa10.57□□□□□ -0.72
LINC00239-201ENST00000556973 COILP38432 576 aaPredicted RBP10.57□□□□□ -0.72
LINC00239-201ENST00000556973 TMEM115Q12893 351 aaPredicted RBP10.57□□□□□ -0.72
LINC00239-201ENST00000556973 POU6F1Q14863 301 aa10.57□□□□□ -0.72
LINC00239-201ENST00000556973 LDLRAP1Q5SW96 308 aa10.57□□□□□ -0.72
LINC00239-201ENST00000556973 ZNF648Q5T619 568 aaPredicted RBP10.57□□□□□ -0.72
LINC00239-201ENST00000556973 TTC27Q6P3X3 843 aa10.57□□□□□ -0.72
LINC00239-201ENST00000556973 GUSBP11Q6P575 273 aa10.57□□□□□ -0.72
LINC00239-201ENST00000556973 CCDC137Q6PK04 289 aaKnown RBP10.57□□□□□ -0.72
LINC00239-201ENST00000556973 PPP1R21Q6ZMI0 780 aa10.57□□□□□ -0.72
LINC00239-201ENST00000556973 CACTIN-AS1Q8N1I8 211 aa10.57□□□□□ -0.72
LINC00239-201ENST00000556973 OR52K1Q8NGK4 314 aa10.57□□□□□ -0.72
LINC00239-201ENST00000556973 GDAP1Q8TB36 358 aa10.57□□□□□ -0.72
LINC00239-201ENST00000556973 GRK7Q8WTQ7 553 aa10.57□□□□□ -0.72
LINC00239-201ENST00000556973 ZDHHC1Q8WTX9 485 aa10.57□□□□□ -0.72
LINC00239-201ENST00000556973 STYXQ8WUJ0 223 aa10.57□□□□□ -0.72
LINC00239-201ENST00000556973 NAT6Q93015 286 aa10.57□□□□□ -0.72
LINC00239-201ENST00000556973 TTC25Q96NG3 672 aa10.57□□□□□ -0.72
LINC00239-201ENST00000556973 NAPGQ99747 312 aaPredicted RBP10.57□□□□□ -0.72
LINC00239-201ENST00000556973 ASB8Q9H765 288 aa10.57□□□□□ -0.72
LINC00239-201ENST00000556973 UGT1A7Q9HAW7 530 aa10.57□□□□□ -0.72
LINC00239-201ENST00000556973 UGT1A10Q9HAW8 530 aa10.57□□□□□ -0.72
LINC00239-201ENST00000556973 UGT1A8Q9HAW9 530 aa10.57□□□□□ -0.72
LINC00239-201ENST00000556973 ARFGAP3Q9NP61 516 aa10.57□□□□□ -0.72
LINC00239-201ENST00000556973 EIF2B3Q9NR50 452 aaKnown RBP10.57□□□□□ -0.72
LINC00239-201ENST00000556973 SPATS2LQ9NUQ6 558 aaKnown RBP10.57□□□□□ -0.72
LINC00239-201ENST00000556973 NLE1Q9NVX2 485 aaPredicted RBP10.57□□□□□ -0.72
LINC00239-201ENST00000556973 SMOXQ9NWM0 555 aa10.57□□□□□ -0.72
LINC00239-201ENST00000556973 TAAR2Q9P1P5 351 aa10.57□□□□□ -0.72
LINC00239-201ENST00000556973 SIRPGQ9P1W8 387 aa10.57□□□□□ -0.72
LINC00239-201ENST00000556973 TMPRSS11EQ9UL52 423 aa10.57□□□□□ -0.72
LINC00239-201ENST00000556973 KCTD3Q9Y597 815 aa10.57□□□□□ -0.72
LINC00239-201ENST00000556973 ST14Q9Y5Y6 855 aa10.57□□□□□ -0.72
LINC00239-201ENST00000556973 SAR1BQ9Y6B6 198 aa10.57□□□□□ -0.72
LINC00239-201ENST00000556973 HEATR9A2RTY3 570 aa10.56□□□□□ -0.72
LINC00239-201ENST00000556973 CTAGE9A4FU28 777 aa10.56□□□□□ -0.72
LINC00239-201ENST00000556973 MROH6A6NGR9 719 aa10.56□□□□□ -0.72
LINC00239-201ENST00000556973 AGAP14A8MT82 685 aa10.56□□□□□ -0.72
LINC00239-201ENST00000556973 H7C0S8 307 aa10.56□□□□□ -0.72
LINC00239-201ENST00000556973 KMOO15229 486 aa10.56□□□□□ -0.72
LINC00239-201ENST00000556973 NOBOXO60393 691 aa10.56□□□□□ -0.72
LINC00239-201ENST00000556973 KCNJ13O60928 360 aa10.56□□□□□ -0.72
LINC00239-201ENST00000556973 MTX2O75431 263 aa10.56□□□□□ -0.72
LINC00239-201ENST00000556973 PRAMEF1O95521 474 aa10.56□□□□□ -0.72
LINC00239-201ENST00000556973 KRT14P02533 472 aa10.56□□□□□ -0.72
LINC00239-201ENST00000556973 JUPP14923 745 aa10.56□□□□□ -0.72
LINC00239-201ENST00000556973 PNLIPP16233 465 aa10.56□□□□□ -0.72
LINC00239-201ENST00000556973 GLB1P16278 677 aa10.56□□□□□ -0.72
LINC00239-201ENST00000556973 SPINK2P20155 84 aa10.56□□□□□ -0.72
LINC00239-201ENST00000556973 ADRA1DP25100 572 aa10.56□□□□□ -0.72
LINC00239-201ENST00000556973 PSMA3P25788 255 aa10.56□□□□□ -0.72
LINC00239-201ENST00000556973 ACTR1BP42025 376 aa10.56□□□□□ -0.72
LINC00239-201ENST00000556973 GRIA1P42261 906 aa10.56□□□□□ -0.72
LINC00239-201ENST00000556973 NPY2RP49146 381 aa10.56□□□□□ -0.72
LINC00239-201ENST00000556973 CLCNKAP51800 687 aa10.56□□□□□ -0.72
LINC00239-201ENST00000556973 ZNF140P52738 457 aaPredicted RBP10.56□□□□□ -0.72
LINC00239-201ENST00000556973 ACTR1AP61163 376 aa10.56□□□□□ -0.72
LINC00239-201ENST00000556973 BASP1P80723 227 aaKnown RBP10.56□□□□□ -0.72
LINC00239-201ENST00000556973 TMPRSS15P98073 1019 aa10.56□□□□□ -0.72
LINC00239-201ENST00000556973 XIAPP98170 497 aa10.56□□□□□ -0.72
LINC00239-201ENST00000556973 CDK16Q00536 496 aa10.56□□□□□ -0.72
LINC00239-201ENST00000556973 INSM1Q01101 510 aaPredicted RBP10.56□□□□□ -0.72
LINC00239-201ENST00000556973 NFATC2Q13469 925 aa10.56□□□□□ -0.72
LINC00239-201ENST00000556973 GTF2H3Q13889 308 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms