RNA–Protein interactions for RNA: ENST00000556700.5

NUMB-222, Transcript of NUMB, endocytic adaptor protein, human

TSL 4

Gene NUMB, Length 529 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUMB-222	ENST00000556700	AGAP3	Q96P47	875 aa		11.43	□□□□□ -0.58
NUMB-222	ENST00000556700	PPP1R2P1	Q96PQ5	205 aa		11.43	□□□□□ -0.58
NUMB-222	ENST00000556700	SRPK1	Q96SB4	655 aa	Known RBP	11.43	□□□□□ -0.58
NUMB-222	ENST00000556700	CMKLR1	Q99788	373 aa		11.43	□□□□□ -0.58
NUMB-222	ENST00000556700	SLC25A51	Q9H1U9	297 aa		11.43	□□□□□ -0.58
NUMB-222	ENST00000556700	PCDH9	Q9HC56	1237 aa		11.43	□□□□□ -0.58
NUMB-222	ENST00000556700	B4GALT6	Q9UBX8	382 aa		11.43	□□□□□ -0.58
NUMB-222	ENST00000556700	TRHDE	Q9UKU6	1024 aa		11.43	□□□□□ -0.58
NUMB-222	ENST00000556700	DOLK	Q9UPQ8	538 aa		11.43	□□□□□ -0.58
NUMB-222	ENST00000556700	PCDHB11	Q9Y5F2	797 aa		11.43	□□□□□ -0.58
NUMB-222	ENST00000556700	DGKB	Q9Y6T7	804 aa		11.43	□□□□□ -0.58
NUMB-222	ENST00000556700	MYO9A	B2RTY4	2548 aa		11.42	□□□□□ -0.58
NUMB-222	ENST00000556700	ITPR2	Q14571	2701 aa		11.42	□□□□□ -0.58
NUMB-222	ENST00000556700	PRKCG	P05129	697 aa		11.42	□□□□□ -0.58
NUMB-222	ENST00000556700	ZNF30	P17039	623 aa		11.42	□□□□□ -0.58
NUMB-222	ENST00000556700	PTPN3	P26045	913 aa		11.42	□□□□□ -0.58
NUMB-222	ENST00000556700	HTR1B	P28222	390 aa		11.42	□□□□□ -0.58
NUMB-222	ENST00000556700	CASR	P41180	1078 aa		11.42	□□□□□ -0.58
NUMB-222	ENST00000556700	POLE2	P56282	527 aa		11.42	□□□□□ -0.58
NUMB-222	ENST00000556700	EIF3E	P60228	445 aa	Known RBP	11.42	□□□□□ -0.58
NUMB-222	ENST00000556700	MTM1	Q13496	603 aa		11.42	□□□□□ -0.58
NUMB-222	ENST00000556700	PRPSAP1	Q14558	356 aa		11.42	□□□□□ -0.58
NUMB-222	ENST00000556700	ACOX1	Q15067	660 aa		11.42	□□□□□ -0.58
NUMB-222	ENST00000556700	AGER	Q15109	404 aa		11.42	□□□□□ -0.58
NUMB-222	ENST00000556700	RPS6KA1	Q15418	735 aa		11.42	□□□□□ -0.58
NUMB-222	ENST00000556700	BORA	Q6PGQ7	559 aa		11.42	□□□□□ -0.58
NUMB-222	ENST00000556700	C17orf82	Q86X59	251 aa	Predicted RBP	11.42	□□□□□ -0.58
NUMB-222	ENST00000556700	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
NUMB-222	ENST00000556700	LPCAT1	Q8NF37	534 aa		11.42	□□□□□ -0.58
NUMB-222	ENST00000556700	ACTL9	Q8TC94	416 aa		11.42	□□□□□ -0.58
NUMB-222	ENST00000556700	NUS1	Q96E22	293 aa		11.42	□□□□□ -0.58
NUMB-222	ENST00000556700	SCRN2	Q96FV2	425 aa		11.42	□□□□□ -0.58
NUMB-222	ENST00000556700	GLOD4	Q9HC38	313 aa		11.42	□□□□□ -0.58
NUMB-222	ENST00000556700	LRIT1	Q9P2V4	623 aa		11.42	□□□□□ -0.58
NUMB-222	ENST00000556700	SAE1	Q9UBE0	346 aa	Predicted RBP	11.42	□□□□□ -0.58
NUMB-222	ENST00000556700	PACSIN2	Q9UNF0	486 aa	Predicted RBP	11.42	□□□□□ -0.58
NUMB-222	ENST00000556700	PPP2R2C	Q9Y2T4	447 aa		11.42	□□□□□ -0.58
NUMB-222	ENST00000556700	OR1A2	Q9Y585	309 aa		11.42	□□□□□ -0.58
NUMB-222	ENST00000556700	SPTBN1	Q01082	2364 aa	Known RBP	11.41	□□□□□ -0.58
NUMB-222	ENST00000556700		A0A0J9YYE9	177 aa		11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	GOLGA6C	A6NDK9	693 aa		11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	GOLGA6B	A6NDN3	693 aa		11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	TMEM202	A6NGA9	273 aa		11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	CACNB4	O00305	520 aa	Predicted RBP	11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	PDE2A	O00408	941 aa	Predicted RBP	11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	DDX3Y	O15523	660 aa	Known RBP	11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	FZD6	O60353	706 aa		11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	HEXIM1	O94992	359 aa	Known RBP	11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	TNF	P01375	233 aa		11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	TRBC1	P01850	177 aa		11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	PCCB	P05166	539 aa		11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	PYGL	P06737	847 aa		11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	GOLGA6D	P0CG33	693 aa		11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	RBP3	P10745	1247 aa		11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	PYGM	P11217	842 aa		11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	FGF3	P11487	239 aa	Predicted RBP	11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	KEL	P23276	732 aa		11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	OTUD4	Q01804	1114 aa	Known RBP	11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	NIPAL4	Q0D2K0	466 aa		11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	RALGDS	Q12967	914 aa		11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	KCNAB2	Q13303	367 aa		11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	C14orf28	Q4W4Y0	310 aa		11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	DARS2	Q6PI48	645 aa	Known RBP	11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	LIPI	Q6XZB0	460 aa		11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	PID1	Q7Z2X4	250 aa		11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	RAVER1	Q8IY67	606 aa	Known RBP	11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	PLA2G15	Q8NCC3	412 aa		11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	CCL4L1	Q8NHW4	92 aa		11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	ARRDC2	Q8TBH0	407 aa		11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	CCHCR1	Q8TD31	782 aa		11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	LRRN4	Q8WUT4	740 aa		11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	MAIP1	Q8WWC4	291 aa		11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	OR1E3	Q8WZA6	343 aa		11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	ALG3	Q92685	438 aa		11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	IMP4	Q96G21	291 aa	Known RBP	11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	PDXP	Q96GD0	296 aa		11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	TEKT5	Q96M29	485 aa		11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	MCCC1	Q96RQ3	725 aa	Predicted RBP	11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	CEP41	Q9BYV8	373 aa		11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	SPRY4	Q9C004	299 aa		11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	CARD9	Q9H257	536 aa		11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	RDH14	Q9HBH5	336 aa		11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	MRPL40	Q9NQ50	206 aa	Known RBP	11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	GOLGA6A	Q9NYA3	693 aa		11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	FAM153A	Q9UHL3	310 aa		11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	RSPH14	Q9UHP6	348 aa		11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	TUBD1	Q9UJT1	453 aa		11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	CHKB	Q9Y259	395 aa		11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	PPIL1	Q9Y3C6	166 aa		11.41	□□□□□ -0.58
NUMB-222	ENST00000556700	PCDHGA3	Q9Y5H0	932 aa		11.41	□□□□□ -0.58
NUMB-222	ENST00000556700		A0A0U1RQJ8	604 aa		11.4	□□□□□ -0.58
NUMB-222	ENST00000556700	STMND1	H3BQB6	276 aa		11.4	□□□□□ -0.58
NUMB-222	ENST00000556700	NUDT21	O43809	227 aa	Known RBP	11.4	□□□□□ -0.58
NUMB-222	ENST00000556700	ANXA9	O76027	345 aa		11.4	□□□□□ -0.58
NUMB-222	ENST00000556700	RECQL5	O94762	991 aa	Predicted RBP	11.4	□□□□□ -0.58
NUMB-222	ENST00000556700	FUCA1	P04066	466 aa		11.4	□□□□□ -0.58
NUMB-222	ENST00000556700	LIF	P15018	202 aa		11.4	□□□□□ -0.58
NUMB-222	ENST00000556700	CTPS1	P17812	591 aa		11.4	□□□□□ -0.58
NUMB-222	ENST00000556700	CDK18	Q07002	472 aa		11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms