RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 SEMA4BQ9NPR2 832 aaPredicted RBP24.1■■□□□ 1.45
TMEM260-207ENST00000555497 LSM7Q9UK45 103 aaKnown RBP24.1■■□□□ 1.45
TMEM260-207ENST00000555497 ASB3Q9Y575 518 aa24.1■■□□□ 1.45
TMEM260-207ENST00000555497 PIP5K1BO14986 540 aa24.1■■□□□ 1.45
TMEM260-207ENST00000555497 CTSAP10619 480 aa24.1■■□□□ 1.45
TMEM260-207ENST00000555497 CHRM3P20309 590 aa24.1■■□□□ 1.45
TMEM260-207ENST00000555497 LILRA6Q6PI73 481 aa24.1■■□□□ 1.45
TMEM260-207ENST00000555497 TWIST2Q8WVJ9 160 aa24.1■■□□□ 1.45
TMEM260-207ENST00000555497 LINGO1Q96FE5 620 aa24.1■■□□□ 1.45
TMEM260-207ENST00000555497 TNKS2Q9H2K2 1166 aa24.1■■□□□ 1.45
TMEM260-207ENST00000555497 SH3BP1Q9Y3L3 701 aa24.1■■□□□ 1.45
TMEM260-207ENST00000555497 CD9P21926 228 aa24.09■■□□□ 1.45
TMEM260-207ENST00000555497 PTGER3P43115 390 aa24.09■■□□□ 1.45
TMEM260-207ENST00000555497 ECT2LQ008S8 904 aa24.09■■□□□ 1.45
TMEM260-207ENST00000555497 CACNG1Q06432 222 aa24.09■■□□□ 1.45
TMEM260-207ENST00000555497 RETSATQ6NUM9 610 aa24.09■■□□□ 1.45
TMEM260-207ENST00000555497 PCDH20Q8N6Y1 951 aaKnown RBP24.09■■□□□ 1.45
TMEM260-207ENST00000555497 PAWRQ96IZ0 340 aaKnown RBP24.09■■□□□ 1.45
TMEM260-207ENST00000555497 SARS2Q9NP81 518 aaKnown RBP24.09■■□□□ 1.45
TMEM260-207ENST00000555497 KLK8O60259 260 aa24.08■■□□□ 1.45
TMEM260-207ENST00000555497 RPS17P08708 135 aaKnown RBP24.08■■□□□ 1.45
TMEM260-207ENST00000555497 RAG1P15918 1043 aa24.08■■□□□ 1.45
TMEM260-207ENST00000555497 PPM1AP35813 382 aa24.08■■□□□ 1.45
TMEM260-207ENST00000555497 BLMHQ13867 455 aa24.08■■□□□ 1.45
TMEM260-207ENST00000555497 FAM151BQ6UXP7 276 aa24.08■■□□□ 1.45
TMEM260-207ENST00000555497 IZUMO2Q6UXV1 221 aa24.08■■□□□ 1.45
TMEM260-207ENST00000555497 CPXM2Q8N436 756 aa24.08■■□□□ 1.45
TMEM260-207ENST00000555497 KCNJ9Q92806 393 aa24.08■■□□□ 1.45
TMEM260-207ENST00000555497 ESAMQ96AP7 390 aa24.08■■□□□ 1.45
TMEM260-207ENST00000555497 VOPP1Q96AW1 172 aa24.08■■□□□ 1.45
TMEM260-207ENST00000555497 SLC46A2Q9BY10 475 aa24.08■■□□□ 1.45
TMEM260-207ENST00000555497 ASB1Q9Y576 335 aa24.08■■□□□ 1.45
TMEM260-207ENST00000555497 PCDHGA7Q9Y5G6 932 aa24.08■■□□□ 1.45
TMEM260-207ENST00000555497 LRG1P02750 347 aa24.08■■□□□ 1.45
TMEM260-207ENST00000555497 CHRM1P11229 460 aaPredicted RBP24.08■■□□□ 1.45
TMEM260-207ENST00000555497 PRDX3P30048 256 aaKnown RBP24.08■■□□□ 1.45
TMEM260-207ENST00000555497 CLCN7P51798 805 aa24.08■■□□□ 1.45
TMEM260-207ENST00000555497 ADARP55265 1226 aaKnown RBP24.08■■□□□ 1.45
TMEM260-207ENST00000555497 IL2P60568 153 aa24.08■■□□□ 1.45
TMEM260-207ENST00000555497 LRP8Q14114 963 aa24.08■■□□□ 1.45
TMEM260-207ENST00000555497 GRB7Q14451 532 aa24.08■■□□□ 1.45
TMEM260-207ENST00000555497 AARS2Q5JTZ9 985 aaKnown RBP24.08■■□□□ 1.45
TMEM260-207ENST00000555497 DGKKQ5KSL6 1271 aa24.08■■□□□ 1.45
TMEM260-207ENST00000555497 PAOXQ6QHF9 649 aa24.08■■□□□ 1.45
TMEM260-207ENST00000555497 PHYKPLQ8IUZ5 450 aa24.08■■□□□ 1.45
TMEM260-207ENST00000555497 MRPL1Q9BYD6 325 aaKnown RBP24.08■■□□□ 1.45
TMEM260-207ENST00000555497 CACNA2D2Q9NY47 1150 aa24.08■■□□□ 1.45
TMEM260-207ENST00000555497 LRCH1Q9Y2L9 728 aa24.08■■□□□ 1.45
TMEM260-207ENST00000555497 SCN8AQ9UQD0 1980 aa24.08■■□□□ 1.44
TMEM260-207ENST00000555497 PFDN6O15212 129 aa24.07■■□□□ 1.44
TMEM260-207ENST00000555497 HTRA2O43464 458 aaPredicted RBP24.07■■□□□ 1.44
TMEM260-207ENST00000555497 C8AP07357 584 aa24.07■■□□□ 1.44
TMEM260-207ENST00000555497 CTSOP43234 321 aaPredicted RBP24.07■■□□□ 1.44
TMEM260-207ENST00000555497 LCP2Q13094 533 aa24.07■■□□□ 1.44
TMEM260-207ENST00000555497 CDKN3Q16667 212 aa24.07■■□□□ 1.44
TMEM260-207ENST00000555497 GEN1Q17RS7 908 aa24.07■■□□□ 1.44
TMEM260-207ENST00000555497 LPCAT4Q643R3 524 aa24.07■■□□□ 1.44
TMEM260-207ENST00000555497 ANKS6Q68DC2 871 aa24.07■■□□□ 1.44
TMEM260-207ENST00000555497 REP15Q6BDI9 236 aa24.07■■□□□ 1.44
TMEM260-207ENST00000555497 ZSWIM9Q86XI8 627 aa24.07■■□□□ 1.44
TMEM260-207ENST00000555497 FUNDC1Q8IVP5 155 aa24.07■■□□□ 1.44
TMEM260-207ENST00000555497 SLC22A17Q8WUG5 538 aa24.07■■□□□ 1.44
TMEM260-207ENST00000555497 UCMAQ8WVF2 138 aa24.07■■□□□ 1.44
TMEM260-207ENST00000555497 RPL10LQ96L21 214 aaKnown RBP24.07■■□□□ 1.44
TMEM260-207ENST00000555497 UTP6Q9NYH9 597 aaKnown RBP24.07■■□□□ 1.44
TMEM260-207ENST00000555497 ZNF225Q9UK10 706 aa24.07■■□□□ 1.44
TMEM260-207ENST00000555497 BTRCQ9Y297 605 aa24.07■■□□□ 1.44
TMEM260-207ENST00000555497 SLC30A1Q9Y6M5 507 aa24.07■■□□□ 1.44
TMEM260-207ENST00000555497 SYCE1LA8MT33 242 aa24.07■■□□□ 1.44
TMEM260-207ENST00000555497 LEFTY2O00292 366 aa24.07■■□□□ 1.44
TMEM260-207ENST00000555497 CSPG5O95196 566 aa24.07■■□□□ 1.44
TMEM260-207ENST00000555497 ESR1P03372 595 aa24.07■■□□□ 1.44
TMEM260-207ENST00000555497 GPX3P22352 226 aa24.07■■□□□ 1.44
TMEM260-207ENST00000555497 BCL2L1Q07817 233 aa24.07■■□□□ 1.44
TMEM260-207ENST00000555497 LRRC36Q1X8D7 754 aa24.07■■□□□ 1.44
TMEM260-207ENST00000555497 MPPE1Q53F39 396 aa24.07■■□□□ 1.44
TMEM260-207ENST00000555497 UGT3A1Q6NUS8 523 aa24.07■■□□□ 1.44
TMEM260-207ENST00000555497 GPR65Q8IYL9 337 aa24.07■■□□□ 1.44
TMEM260-207ENST00000555497 FIBINQ8TAL6 211 aa24.07■■□□□ 1.44
TMEM260-207ENST00000555497 GDPD5Q8WTR4 605 aa24.07■■□□□ 1.44
TMEM260-207ENST00000555497 ACDQ96AP0 544 aa24.07■■□□□ 1.44
TMEM260-207ENST00000555497 BOCQ9BWV1 1114 aa24.07■■□□□ 1.44
TMEM260-207ENST00000555497 BATF3Q9NR55 127 aa24.07■■□□□ 1.44
TMEM260-207ENST00000555497 PDE4DIPQ5VU43 2346 aa24.06■■□□□ 1.44
TMEM260-207ENST00000555497 A0A0J9YYE9 177 aa24.06■■□□□ 1.44
TMEM260-207ENST00000555497 E5RI56 91 aa24.06■■□□□ 1.44
TMEM260-207ENST00000555497 CLDN7O95471 211 aa24.06■■□□□ 1.44
TMEM260-207ENST00000555497 CXCL14O95715 111 aa24.06■■□□□ 1.44
TMEM260-207ENST00000555497 TRBC1P01850 177 aa24.06■■□□□ 1.44
TMEM260-207ENST00000555497 SNRPB2P08579 225 aaKnown RBP24.06■■□□□ 1.44
TMEM260-207ENST00000555497 LINC00032P0C843 101 aa24.06■■□□□ 1.44
TMEM260-207ENST00000555497 HNF1BP35680 557 aa24.06■■□□□ 1.44
TMEM260-207ENST00000555497 PSME3P61289 254 aa24.06■■□□□ 1.44
TMEM260-207ENST00000555497 CDC16Q13042 620 aa24.06■■□□□ 1.44
TMEM260-207ENST00000555497 PLEKHG6Q3KR16 790 aa24.06■■□□□ 1.44
TMEM260-207ENST00000555497 DDIASQ8IXT1 998 aa24.06■■□□□ 1.44
TMEM260-207ENST00000555497 FAM156AQ8NDB6 213 aa24.06■■□□□ 1.44
TMEM260-207ENST00000555497 PLEKHG4BQ96PX9 1271 aa24.06■■□□□ 1.44
TMEM260-207ENST00000555497 ECSITQ9BQ95 431 aa24.06■■□□□ 1.44
TMEM260-207ENST00000555497 PCTPQ9UKL6 214 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms