RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 AADATQ8N5Z0 425 aa5.36□□□□□ -1.55
VRK1-205ENST00000555402 TMCO6Q96DC7 493 aa5.36□□□□□ -1.55
VRK1-205ENST00000555402 EGLN2Q96KS0 407 aa5.36□□□□□ -1.55
VRK1-205ENST00000555402 CEP295NLQ96MC4 621 aa5.36□□□□□ -1.55
VRK1-205ENST00000555402 FIZ1Q96SL8 496 aa5.36□□□□□ -1.55
VRK1-205ENST00000555402 SH3GL2Q99962 352 aa5.36□□□□□ -1.55
VRK1-205ENST00000555402 MRPL1Q9BYD6 325 aaKnown RBP5.36□□□□□ -1.55
VRK1-205ENST00000555402 OR10A4Q9H209 315 aa5.36□□□□□ -1.55
VRK1-205ENST00000555402 PLAC1Q9HBJ0 212 aa5.36□□□□□ -1.55
VRK1-205ENST00000555402 EPB41L5Q9HCM4 733 aa5.36□□□□□ -1.55
VRK1-205ENST00000555402 CNGB3Q9NQW8 809 aa5.36□□□□□ -1.55
VRK1-205ENST00000555402 WSB2Q9NYS7 404 aaPredicted RBP5.36□□□□□ -1.55
VRK1-205ENST00000555402 BCCIPQ9P287 314 aaKnown RBP eCLIP5.36□□□□□ -1.55
VRK1-205ENST00000555402 PLAGL1Q9UM63 463 aa5.36□□□□□ -1.55
VRK1-205ENST00000555402 TRPV2Q9Y5S1 764 aa5.36□□□□□ -1.55
VRK1-205ENST00000555402 KANSL1LA0AUZ9 987 aa5.35□□□□□ -1.55
VRK1-205ENST00000555402 M0QZ24 198 aa5.35□□□□□ -1.55
VRK1-205ENST00000555402 HSPA12AO43301 675 aa5.35□□□□□ -1.55
VRK1-205ENST00000555402 ICAM1P05362 532 aa5.35□□□□□ -1.55
VRK1-205ENST00000555402 TRIM21P19474 475 aaKnown RBP5.35□□□□□ -1.55
VRK1-205ENST00000555402 RFX5P48382 616 aaPredicted RBP5.35□□□□□ -1.55
VRK1-205ENST00000555402 COMPP49747 757 aaPredicted RBP5.35□□□□□ -1.55
VRK1-205ENST00000555402 ECT2LQ008S8 904 aa5.35□□□□□ -1.55
VRK1-205ENST00000555402 BAATQ14032 418 aaPredicted RBP5.35□□□□□ -1.55
VRK1-205ENST00000555402 KRT33BQ14525 404 aa5.35□□□□□ -1.55
VRK1-205ENST00000555402 HNF4GQ14541 408 aa5.35□□□□□ -1.55
VRK1-205ENST00000555402 ODF3L2Q3SX64 289 aa5.35□□□□□ -1.55
VRK1-205ENST00000555402 C9orf152Q5JTZ5 239 aa5.35□□□□□ -1.55
VRK1-205ENST00000555402 C1orf141Q5JVX7 400 aa5.35□□□□□ -1.55
VRK1-205ENST00000555402 KRT77Q7Z794 578 aa5.35□□□□□ -1.55
VRK1-205ENST00000555402 MCEMP1Q8IX19 187 aa5.35□□□□□ -1.55
VRK1-205ENST00000555402 MINDY1Q8N5J2 469 aa5.35□□□□□ -1.55
VRK1-205ENST00000555402 PTERQ96BW5 349 aa5.35□□□□□ -1.55
VRK1-205ENST00000555402 URB1-AS1Q96HZ7 61 aa5.35□□□□□ -1.55
VRK1-205ENST00000555402 TXNDC15Q96J42 360 aa5.35□□□□□ -1.55
VRK1-205ENST00000555402 LRFN5Q96NI6 719 aa5.35□□□□□ -1.55
VRK1-205ENST00000555402 ZPBPQ9BS86 351 aa5.35□□□□□ -1.55
VRK1-205ENST00000555402 HAUS8Q9BT25 410 aa5.35□□□□□ -1.55
VRK1-205ENST00000555402 MMTAG2Q9BU76 263 aaKnown RBP5.35□□□□□ -1.55
VRK1-205ENST00000555402 CCDC106Q9BWC9 280 aa5.35□□□□□ -1.55
VRK1-205ENST00000555402 ZCCHC17Q9NP64 241 aaKnown RBP5.35□□□□□ -1.55
VRK1-205ENST00000555402 STK39Q9UEW8 545 aa5.35□□□□□ -1.55
VRK1-205ENST00000555402 ARHGEF40Q8TER5 1519 aa5.34□□□□□ -1.55
VRK1-205ENST00000555402 A0A1W2PRQ8 180 aa5.34□□□□□ -1.55
VRK1-205ENST00000555402 CPED1A4D0V7 1026 aa5.34□□□□□ -1.55
VRK1-205ENST00000555402 EIF4E1BA6NMX2 242 aaKnown RBP5.34□□□□□ -1.55
VRK1-205ENST00000555402 SLC28A2O43868 658 aa5.34□□□□□ -1.55
VRK1-205ENST00000555402 RSL1D1O76021 490 aaKnown RBP5.34□□□□□ -1.55
VRK1-205ENST00000555402 KCNK5O95279 499 aa5.34□□□□□ -1.55
VRK1-205ENST00000555402 GGPS1O95749 300 aa5.34□□□□□ -1.55
VRK1-205ENST00000555402 AFPP02771 609 aaKnown RBP5.34□□□□□ -1.55
VRK1-205ENST00000555402 TPOP07202 933 aa5.34□□□□□ -1.55
VRK1-205ENST00000555402 EEF1DP29692 281 aaKnown RBP5.34□□□□□ -1.55
VRK1-205ENST00000555402 NUDT6P53370 316 aa5.34□□□□□ -1.55
VRK1-205ENST00000555402 CSNK2A1P68400 391 aaPredicted RBP5.34□□□□□ -1.55
VRK1-205ENST00000555402 FOXM1Q08050 763 aa5.34□□□□□ -1.55
VRK1-205ENST00000555402 SREBF2Q12772 1141 aa5.34□□□□□ -1.55
VRK1-205ENST00000555402 GRAPQ13588 217 aa5.34□□□□□ -1.55
VRK1-205ENST00000555402 KYNUQ16719 465 aa5.34□□□□□ -1.55
VRK1-205ENST00000555402 ERMARDQ5T6L9 678 aa5.34□□□□□ -1.55
VRK1-205ENST00000555402 KRT79Q5XKE5 535 aa5.34□□□□□ -1.55
VRK1-205ENST00000555402 DUS1LQ6P1R4 473 aaKnown RBP5.34□□□□□ -1.55
VRK1-205ENST00000555402 CSNK2A3Q8NEV1 391 aa5.34□□□□□ -1.55
VRK1-205ENST00000555402 OR1J2Q8NGS2 313 aa5.34□□□□□ -1.55
VRK1-205ENST00000555402 HM13Q8TCT9 377 aa5.34□□□□□ -1.55
VRK1-205ENST00000555402 TRPC4APQ8TEL6 797 aa5.34□□□□□ -1.55
VRK1-205ENST00000555402 APBB2Q92870 758 aa5.34□□□□□ -1.55
VRK1-205ENST00000555402 ORAI1Q96D31 301 aa5.34□□□□□ -1.55
VRK1-205ENST00000555402 CDRT15Q96T59 188 aa5.34□□□□□ -1.55
VRK1-205ENST00000555402 RTN4RQ9BZR6 473 aa5.34□□□□□ -1.55
VRK1-205ENST00000555402 KCNN2Q9H2S1 579 aa5.34□□□□□ -1.55
VRK1-205ENST00000555402 ZBTB40Q9NUA8 1239 aa5.34□□□□□ -1.55
VRK1-205ENST00000555402 UBA2Q9UBT2 640 aaPredicted RBP5.34□□□□□ -1.55
VRK1-205ENST00000555402 DBNLQ9UJU6 430 aaKnown RBP5.34□□□□□ -1.55
VRK1-205ENST00000555402 FZD10Q9ULW2 581 aa5.34□□□□□ -1.55
VRK1-205ENST00000555402 INSL5Q9Y5Q6 135 aa5.34□□□□□ -1.55
VRK1-205ENST00000555402 ATXN2Q99700 1313 aaKnown RBP5.33□□□□□ -1.56
VRK1-205ENST00000555402 A0A1B0GVT2 93 aa5.33□□□□□ -1.56
VRK1-205ENST00000555402 A0A1W2PR77 199 aa5.33□□□□□ -1.56
VRK1-205ENST00000555402 LNP1A1A4G5 178 aa5.33□□□□□ -1.56
VRK1-205ENST00000555402 WNT9BO14905 357 aa5.33□□□□□ -1.56
VRK1-205ENST00000555402 CLGNO14967 610 aa5.33□□□□□ -1.56
VRK1-205ENST00000555402 SMAD9O15198 467 aaKnown RBP5.33□□□□□ -1.56
VRK1-205ENST00000555402 GAS8-AS1O95177 125 aa5.33□□□□□ -1.56
VRK1-205ENST00000555402 LCATP04180 440 aa5.33□□□□□ -1.56
VRK1-205ENST00000555402 FGF2P09038 288 aa5.33□□□□□ -1.56
VRK1-205ENST00000555402 TNFRSF1BP20333 461 aa5.33□□□□□ -1.56
VRK1-205ENST00000555402 BDKRB2P30411 391 aa5.33□□□□□ -1.56
VRK1-205ENST00000555402 KCNJ4P48050 445 aa5.33□□□□□ -1.56
VRK1-205ENST00000555402 PPP5CP53041 499 aa5.33□□□□□ -1.56
VRK1-205ENST00000555402 PPP2R2BQ00005 443 aa5.33□□□□□ -1.56
VRK1-205ENST00000555402 MAD2L1Q13257 205 aaPredicted RBP5.33□□□□□ -1.56
VRK1-205ENST00000555402 PLCB4Q15147 1175 aa5.33□□□□□ -1.56
VRK1-205ENST00000555402 PPP6R3Q5H9R7 873 aaPredicted RBP5.33□□□□□ -1.56
VRK1-205ENST00000555402 DCST1Q5T197 706 aa5.33□□□□□ -1.56
VRK1-205ENST00000555402 KCTD18Q6PI47 426 aaPredicted RBP5.33□□□□□ -1.56
VRK1-205ENST00000555402 GSDMBQ8TAX9 411 aa5.33□□□□□ -1.56
VRK1-205ENST00000555402 RND1Q92730 232 aa5.33□□□□□ -1.56
VRK1-205ENST00000555402 ZNF622Q969S3 477 aaKnown RBP eCLIP5.33□□□□□ -1.56
VRK1-205ENST00000555402 ZNF653Q96CK0 615 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms