RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 ZNF653Q96CK0 615 aa8.8□□□□□ -1
TDP1-208ENST00000553989 DTD2Q96FN9 168 aa8.8□□□□□ -1
TDP1-208ENST00000553989 CAPZA3Q96KX2 299 aa8.8□□□□□ -1
TDP1-208ENST00000553989 COQ10AQ96MF6 247 aa8.8□□□□□ -1
TDP1-208ENST00000553989 PSKH2Q96QS6 385 aa8.8□□□□□ -1
TDP1-208ENST00000553989 OR2M4Q96R27 311 aa8.8□□□□□ -1
TDP1-208ENST00000553989 SLC38A3Q99624 504 aa8.8□□□□□ -1
TDP1-208ENST00000553989 TEX101Q9BY14 249 aa8.8□□□□□ -1
TDP1-208ENST00000553989 TRNAU1APQ9NX07 287 aaKnown RBP8.8□□□□□ -1
TDP1-208ENST00000553989 SLC39A1Q9NY26 324 aa8.8□□□□□ -1
TDP1-208ENST00000553989 CD84Q9UIB8 345 aa8.8□□□□□ -1
TDP1-208ENST00000553989 VPS9D1Q9Y2B5 631 aa8.8□□□□□ -1
TDP1-208ENST00000553989 DUSP10Q9Y6W6 482 aa8.8□□□□□ -1
TDP1-208ENST00000553989 MYO18BQ8IUG5 2567 aa8.8□□□□□ -1
TDP1-208ENST00000553989 TENM4Q6N022 2769 aa8.8□□□□□ -1
TDP1-208ENST00000553989 PIEZO2Q9H5I5 2752 aa8.8□□□□□ -1
TDP1-208ENST00000553989 SCN8AQ9UQD0 1980 aa8.79□□□□□ -1
TDP1-208ENST00000553989 NPIPB15A6NHN6 443 aaPredicted RBP8.79□□□□□ -1
TDP1-208ENST00000553989 EFCAB7A8K855 629 aa8.79□□□□□ -1
TDP1-208ENST00000553989 CYSRT1A8MQ03 144 aa8.79□□□□□ -1
TDP1-208ENST00000553989 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.79□□□□□ -1
TDP1-208ENST00000553989 SYF2O95926 243 aaKnown RBP8.79□□□□□ -1
TDP1-208ENST00000553989 FGF3P11487 239 aaPredicted RBP8.79□□□□□ -1
TDP1-208ENST00000553989 LIFP15018 202 aa8.79□□□□□ -1
TDP1-208ENST00000553989 CTPS1P17812 591 aa8.79□□□□□ -1
TDP1-208ENST00000553989 ITGB6P18564 788 aa8.79□□□□□ -1
TDP1-208ENST00000553989 LHCGRP22888 699 aa8.79□□□□□ -1
TDP1-208ENST00000553989 CD1CP29017 333 aa8.79□□□□□ -1
TDP1-208ENST00000553989 ADCY8P40145 1251 aa8.79□□□□□ -1
TDP1-208ENST00000553989 MMP13P45452 471 aa8.79□□□□□ -1
TDP1-208ENST00000553989 MAPK9P45984 424 aa8.79□□□□□ -1
TDP1-208ENST00000553989 GPR3P46089 330 aa8.79□□□□□ -1
TDP1-208ENST00000553989 CCR10P46092 362 aa8.79□□□□□ -1
TDP1-208ENST00000553989 POLD2P49005 469 aa8.79□□□□□ -1
TDP1-208ENST00000553989 ZNF135P52742 658 aaPredicted RBP8.79□□□□□ -1
TDP1-208ENST00000553989 LIMK2P53671 638 aa8.79□□□□□ -1
TDP1-208ENST00000553989 EPHB1P54762 984 aa8.79□□□□□ -1
TDP1-208ENST00000553989 POLE2P56282 527 aa8.79□□□□□ -1
TDP1-208ENST00000553989 TLE1Q04724 770 aa8.79□□□□□ -1
TDP1-208ENST00000553989 ITKQ08881 620 aa8.79□□□□□ -1
TDP1-208ENST00000553989 KLHL30Q0D2K2 578 aa8.79□□□□□ -1
TDP1-208ENST00000553989 TRAF2Q12933 501 aa8.79□□□□□ -1
TDP1-208ENST00000553989 TRA2AQ13595 282 aaKnown RBP eCLIP8.79□□□□□ -1
TDP1-208ENST00000553989 CLCA4Q14CN2 919 aa8.79□□□□□ -1
TDP1-208ENST00000553989 SMTNL2Q2TAL5 461 aa8.79□□□□□ -1
TDP1-208ENST00000553989 DCAF12Q5T6F0 453 aa8.79□□□□□ -1
TDP1-208ENST00000553989 ARMC12Q5T9G4 340 aa8.79□□□□□ -1
TDP1-208ENST00000553989 HGSNATQ68CP4 663 aa8.79□□□□□ -1
TDP1-208ENST00000553989 PLEKHA7Q6IQ23 1121 aa8.79□□□□□ -1
TDP1-208ENST00000553989 Q6ZVL8 140 aa8.79□□□□□ -1
TDP1-208ENST00000553989 ZNF438Q7Z4V0 828 aa8.79□□□□□ -1
TDP1-208ENST00000553989 ZNF761Q86XN6 746 aaPredicted RBP8.79□□□□□ -1
TDP1-208ENST00000553989 PTRH1Q86Y79 214 aaKnown RBP8.79□□□□□ -1
TDP1-208ENST00000553989 NRROSQ86YC3 692 aa8.79□□□□□ -1
TDP1-208ENST00000553989 TP53INP2Q8IXH6 220 aa8.79□□□□□ -1
TDP1-208ENST00000553989 CACNA2D3Q8IZS8 1091 aa8.79□□□□□ -1
TDP1-208ENST00000553989 SYCE1Q8N0S2 351 aa8.79□□□□□ -1
TDP1-208ENST00000553989 NAGSQ8N159 534 aa8.79□□□□□ -1
TDP1-208ENST00000553989 OR4D9Q8NGE8 314 aa8.79□□□□□ -1
TDP1-208ENST00000553989 OR10G6Q8NH81 332 aa8.79□□□□□ -1
TDP1-208ENST00000553989 FAM76AQ8TAV0 307 aa8.79□□□□□ -1
TDP1-208ENST00000553989 FNIP1Q8TF40 1166 aa8.79□□□□□ -1
TDP1-208ENST00000553989 HSPH1Q92598 858 aa8.79□□□□□ -1
TDP1-208ENST00000553989 NKD1Q969G9 470 aa8.79□□□□□ -1
TDP1-208ENST00000553989 PMEPA1Q969W9 287 aa8.79□□□□□ -1
TDP1-208ENST00000553989 KIAA1143Q96AT1 154 aaPredicted RBP8.79□□□□□ -1
TDP1-208ENST00000553989 ZNF599Q96NL3 588 aa8.79□□□□□ -1
TDP1-208ENST00000553989 NUDCD1Q96RS6 583 aa8.79□□□□□ -1
TDP1-208ENST00000553989 SEMA3CQ99985 751 aa8.79□□□□□ -1
TDP1-208ENST00000553989 DPYSL5Q9BPU6 564 aa8.79□□□□□ -1
TDP1-208ENST00000553989 FRMD8Q9BZ67 464 aaPredicted RBP8.79□□□□□ -1
TDP1-208ENST00000553989 B3GNT4Q9C0J1 378 aa8.79□□□□□ -1
TDP1-208ENST00000553989 STN1Q9H668 368 aaKnown RBP8.79□□□□□ -1
TDP1-208ENST00000553989 NOD2Q9HC29 1040 aa8.79□□□□□ -1
TDP1-208ENST00000553989 GEMIN8Q9NWZ8 242 aaKnown RBP8.79□□□□□ -1
TDP1-208ENST00000553989 CNOT8Q9UFF9 292 aaKnown RBP8.79□□□□□ -1
TDP1-208ENST00000553989 PHTF1Q9UMS5 762 aa8.79□□□□□ -1
TDP1-208ENST00000553989 TMEM98Q9Y2Y6 226 aa8.79□□□□□ -1
TDP1-208ENST00000553989 TTLL3Q9Y4R7 772 aa8.79□□□□□ -1
TDP1-208ENST00000553989 B3GALT1Q9Y5Z6 326 aa8.79□□□□□ -1
TDP1-208ENST00000553989 SCINQ9Y6U3 715 aa8.79□□□□□ -1
TDP1-208ENST00000553989 TRBV23OR9-2A0A075B6M9 112 aa8.78□□□□□ -1
TDP1-208ENST00000553989 IGHV1OR21-1A0A087WYE8 117 aa8.78□□□□□ -1
TDP1-208ENST00000553989 A0A0A6YYK5 440 aaPredicted RBP8.78□□□□□ -1
TDP1-208ENST00000553989 ZNF891A8MT65 544 aaPredicted RBP8.78□□□□□ -1
TDP1-208ENST00000553989 A8MU76 341 aa8.78□□□□□ -1
TDP1-208ENST00000553989 PSMD11O00231 422 aa8.78□□□□□ -1
TDP1-208ENST00000553989 PPM1DO15297 605 aa8.78□□□□□ -1
TDP1-208ENST00000553989 HTRA2O43464 458 aaPredicted RBP8.78□□□□□ -1
TDP1-208ENST00000553989 DUX1O43812 170 aa8.78□□□□□ -1
TDP1-208ENST00000553989 RAD1O60671 282 aa8.78□□□□□ -1
TDP1-208ENST00000553989 ASMTLO95671 621 aa8.78□□□□□ -1
TDP1-208ENST00000553989 PRKAR1AP10644 381 aa8.78□□□□□ -1
TDP1-208ENST00000553989 THRAP10827 490 aa8.78□□□□□ -1
TDP1-208ENST00000553989 AMPD1P23109 780 aa8.78□□□□□ -1
TDP1-208ENST00000553989 CSF2RBP32927 897 aa8.78□□□□□ -1
TDP1-208ENST00000553989 MAN1A1P33908 653 aa8.78□□□□□ -1
TDP1-208ENST00000553989 SERPINB6P35237 376 aa8.78□□□□□ -1
TDP1-208ENST00000553989 UGT1A3P35503 534 aa8.78□□□□□ -1
TDP1-208ENST00000553989 PRKCIP41743 596 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms