RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 TMEM30BQ3MIR4 351 aa4.41□□□□□ -1.7
GPN3-209ENST00000551079 DPCR1Q3MIW9 517 aa4.41□□□□□ -1.7
GPN3-209ENST00000551079 CEACAM20Q6UY09 585 aa4.41□□□□□ -1.7
GPN3-209ENST00000551079 OR10V1Q8NGI7 309 aa4.41□□□□□ -1.7
GPN3-209ENST00000551079 MORC4Q8TE76 937 aa4.41□□□□□ -1.7
GPN3-209ENST00000551079 ZUFSPQ96AP4 578 aa4.41□□□□□ -1.7
GPN3-209ENST00000551079 RRP36Q96EU6 259 aaKnown RBP4.41□□□□□ -1.7
GPN3-209ENST00000551079 MMABQ96EY8 250 aaPredicted RBP4.41□□□□□ -1.7
GPN3-209ENST00000551079 ZNF354BQ96LW1 612 aa4.41□□□□□ -1.7
GPN3-209ENST00000551079 BARHL1Q9BZE3 327 aa4.41□□□□□ -1.7
GPN3-209ENST00000551079 SIL1Q9H173 461 aa4.41□□□□□ -1.7
GPN3-209ENST00000551079 LRMDAQ9H2I8 198 aa4.41□□□□□ -1.7
GPN3-209ENST00000551079 TCP11L1Q9NUJ3 509 aa4.41□□□□□ -1.7
GPN3-209ENST00000551079 DDX43Q9NXZ2 648 aaKnown RBP4.41□□□□□ -1.7
GPN3-209ENST00000551079 MARCH4Q9P2E8 410 aaPredicted RBP4.41□□□□□ -1.7
GPN3-209ENST00000551079 UBA2Q9UBT2 640 aaPredicted RBP4.41□□□□□ -1.7
GPN3-209ENST00000551079 MAU2Q9Y6X3 613 aa4.41□□□□□ -1.7
GPN3-209ENST00000551079 FAM90A26D6RGX4 464 aa4.4□□□□□ -1.71
GPN3-209ENST00000551079 ANKRD28O15084 1053 aa4.4□□□□□ -1.71
GPN3-209ENST00000551079 PAGE4O60829 102 aa4.4□□□□□ -1.71
GPN3-209ENST00000551079 JRKO75564 520 aa4.4□□□□□ -1.71
GPN3-209ENST00000551079 NR0B1P51843 470 aaKnown RBP4.4□□□□□ -1.71
GPN3-209ENST00000551079 COG7P83436 770 aa4.4□□□□□ -1.71
GPN3-209ENST00000551079 PMP22Q01453 160 aa4.4□□□□□ -1.71
GPN3-209ENST00000551079 FRG1Q14331 258 aaKnown RBP4.4□□□□□ -1.71
GPN3-209ENST00000551079 SFMBT2Q5VUG0 894 aa4.4□□□□□ -1.71
GPN3-209ENST00000551079 PAPD4Q6PIY7 484 aaKnown RBP4.4□□□□□ -1.71
GPN3-209ENST00000551079 RAD9BQ6WBX8 426 aa4.4□□□□□ -1.71
GPN3-209ENST00000551079 CNTROBQ8N137 903 aa4.4□□□□□ -1.71
GPN3-209ENST00000551079 ZNF524Q96C55 264 aa4.4□□□□□ -1.71
GPN3-209ENST00000551079 MAP7D2Q96T17 732 aa4.4□□□□□ -1.71
GPN3-209ENST00000551079 PIP5K1AQ99755 562 aa4.4□□□□□ -1.71
GPN3-209ENST00000551079 PDCL3Q9H2J4 239 aa4.4□□□□□ -1.71
GPN3-209ENST00000551079 A6NLC8 198 aa4.39□□□□□ -1.71
GPN3-209ENST00000551079 PCDH7O60245 1069 aa4.39□□□□□ -1.71
GPN3-209ENST00000551079 PRKNO60260 465 aaPredicted RBP4.39□□□□□ -1.71
GPN3-209ENST00000551079 CSF2RAP15509 400 aa4.39□□□□□ -1.71
GPN3-209ENST00000551079 DCTP40126 519 aa4.39□□□□□ -1.71
GPN3-209ENST00000551079 ARCN1P48444 511 aaKnown RBP4.39□□□□□ -1.71
GPN3-209ENST00000551079 HSD17B4P51659 736 aa4.39□□□□□ -1.71
GPN3-209ENST00000551079 MLLT10P55197 1068 aa4.39□□□□□ -1.71
GPN3-209ENST00000551079 OLR1P78380 273 aa4.39□□□□□ -1.71
GPN3-209ENST00000551079 ZBED6P86452 979 aa4.39□□□□□ -1.71
GPN3-209ENST00000551079 CDONQ4KMG0 1287 aa4.39□□□□□ -1.71
GPN3-209ENST00000551079 ATF7IPQ6VMQ6 1270 aa4.39□□□□□ -1.71
GPN3-209ENST00000551079 METTL6Q8TCB7 284 aa4.39□□□□□ -1.71
GPN3-209ENST00000551079 SLC44A1Q8WWI5 657 aa4.39□□□□□ -1.71
GPN3-209ENST00000551079 TM9SF4Q92544 642 aa4.39□□□□□ -1.71
GPN3-209ENST00000551079 INTS12Q96CB8 462 aaKnown RBP4.39□□□□□ -1.71
GPN3-209ENST00000551079 STAMBPL1Q96FJ0 436 aa4.39□□□□□ -1.71
GPN3-209ENST00000551079 TBATAQ96M53 351 aa4.39□□□□□ -1.71
GPN3-209ENST00000551079 C17orf77Q96MU5 243 aa4.39□□□□□ -1.71
GPN3-209ENST00000551079 PSMD1Q99460 953 aa4.39□□□□□ -1.71
GPN3-209ENST00000551079 TFB2MQ9H5Q4 396 aaKnown RBP4.39□□□□□ -1.71
GPN3-209ENST00000551079 MAGIXQ9H6Y5 334 aa4.39□□□□□ -1.71
GPN3-209ENST00000551079 JMJD4Q9H9V9 463 aa4.39□□□□□ -1.71
GPN3-209ENST00000551079 PREBQ9HCU5 417 aa4.39□□□□□ -1.71
GPN3-209ENST00000551079 UBN1Q9NPG3 1134 aa4.39□□□□□ -1.71
GPN3-209ENST00000551079 STK39Q9UEW8 545 aa4.39□□□□□ -1.71
GPN3-209ENST00000551079 OR5K3A6NET4 321 aa4.38□□□□□ -1.71
GPN3-209ENST00000551079 NPIPB15A6NHN6 443 aaPredicted RBP4.38□□□□□ -1.71
GPN3-209ENST00000551079 CTSVO60911 334 aa4.38□□□□□ -1.71
GPN3-209ENST00000551079 CAVIN2O95810 425 aa4.38□□□□□ -1.71
GPN3-209ENST00000551079 LDLRP01130 860 aa4.38□□□□□ -1.71
GPN3-209ENST00000551079 NR1D1P20393 614 aa4.38□□□□□ -1.71
GPN3-209ENST00000551079 PRCPP42785 496 aa4.38□□□□□ -1.71
GPN3-209ENST00000551079 F2RL1P55085 397 aa4.38□□□□□ -1.71
GPN3-209ENST00000551079 RUNX1T1Q06455 604 aa4.38□□□□□ -1.71
GPN3-209ENST00000551079 TMEM115Q12893 351 aaPredicted RBP4.38□□□□□ -1.71
GPN3-209ENST00000551079 PPIGQ13427 754 aaKnown RBP eCLIP4.38□□□□□ -1.71
GPN3-209ENST00000551079 ACVR2BQ13705 512 aa4.38□□□□□ -1.71
GPN3-209ENST00000551079 PDE1CQ14123 709 aaPredicted RBP4.38□□□□□ -1.71
GPN3-209ENST00000551079 ZNF876PQ49A33 203 aa4.38□□□□□ -1.71
GPN3-209ENST00000551079 KRTCAP3Q53RY4 240 aa4.38□□□□□ -1.71
GPN3-209ENST00000551079 ADSSL1Q8N142 457 aa4.38□□□□□ -1.71
GPN3-209ENST00000551079 RDM1Q8NG50 284 aa4.38□□□□□ -1.71
GPN3-209ENST00000551079 TAS1R2Q8TE23 839 aa4.38□□□□□ -1.71
GPN3-209ENST00000551079 UTP15Q8TED0 518 aaKnown RBP4.38□□□□□ -1.71
GPN3-209ENST00000551079 PHF21AQ96BD5 680 aa4.38□□□□□ -1.71
GPN3-209ENST00000551079 ARHGEF26Q96DR7 871 aa4.38□□□□□ -1.71
GPN3-209ENST00000551079 LGALS12Q96DT0 336 aa4.38□□□□□ -1.71
GPN3-209ENST00000551079 ABHD8Q96I13 439 aa4.38□□□□□ -1.71
GPN3-209ENST00000551079 SCPEP1Q9HB40 452 aa4.38□□□□□ -1.71
GPN3-209ENST00000551079 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.38□□□□□ -1.71
GPN3-209ENST00000551079 CNOT8Q9UFF9 292 aaKnown RBP4.38□□□□□ -1.71
GPN3-209ENST00000551079 NOTCH3Q9UM47 2321 aa4.38□□□□□ -1.71
GPN3-209ENST00000551079 A0A1W2PP11 408 aa4.37□□□□□ -1.71
GPN3-209ENST00000551079 A0A1W2PPH5 198 aa4.37□□□□□ -1.71
GPN3-209ENST00000551079 KANSL1LA0AUZ9 987 aa4.37□□□□□ -1.71
GPN3-209ENST00000551079 C1orf226A1L170 272 aa4.37□□□□□ -1.71
GPN3-209ENST00000551079 EIF4E1BA6NMX2 242 aaKnown RBP4.37□□□□□ -1.71
GPN3-209ENST00000551079 ANKRD66B4E2M5 251 aa4.37□□□□□ -1.71
GPN3-209ENST00000551079 BLOC1S5-TXNDC5H3BN57 136 aa4.37□□□□□ -1.71
GPN3-209ENST00000551079 TGFB1I1O43294 461 aa4.37□□□□□ -1.71
GPN3-209ENST00000551079 BUD23O43709 281 aaKnown RBP4.37□□□□□ -1.71
GPN3-209ENST00000551079 SLC25A12O75746 678 aa4.37□□□□□ -1.71
GPN3-209ENST00000551079 PDE9AO76083 593 aa4.37□□□□□ -1.71
GPN3-209ENST00000551079 IPO7O95373 1038 aaKnown RBP4.37□□□□□ -1.71
GPN3-209ENST00000551079 NR2F2P24468 414 aa4.37□□□□□ -1.71
GPN3-209ENST00000551079 ICAM3P32942 547 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms