RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 ADCY2Q08462 1091 aa6.72□□□□□ -1.33
CCDC60-205ENST00000546345 SPIDRQ14159 915 aa6.72□□□□□ -1.33
CCDC60-205ENST00000546345 FZD2Q14332 565 aa6.72□□□□□ -1.33
CCDC60-205ENST00000546345 MEA1Q16626 185 aa6.72□□□□□ -1.33
CCDC60-205ENST00000546345 DEFB133Q30KQ1 61 aa6.72□□□□□ -1.33
CCDC60-205ENST00000546345 WDR72Q3MJ13 1102 aa6.72□□□□□ -1.33
CCDC60-205ENST00000546345 MPPE1Q53F39 396 aa6.72□□□□□ -1.33
CCDC60-205ENST00000546345 CMPK2Q5EBM0 449 aa6.72□□□□□ -1.33
CCDC60-205ENST00000546345 EMC4Q5J8M3 183 aa6.72□□□□□ -1.33
CCDC60-205ENST00000546345 AP1ARQ63HQ0 302 aa6.72□□□□□ -1.33
CCDC60-205ENST00000546345 OR6B2Q6IFH4 312 aa6.72□□□□□ -1.33
CCDC60-205ENST00000546345 FOXR2Q6PJQ5 311 aa6.72□□□□□ -1.33
CCDC60-205ENST00000546345 SCARA5Q6ZMJ2 495 aa6.72□□□□□ -1.33
CCDC60-205ENST00000546345 TMPRSS9Q7Z410 1059 aa6.72□□□□□ -1.33
CCDC60-205ENST00000546345 ABI3BPQ7Z7G0 1075 aa6.72□□□□□ -1.33
CCDC60-205ENST00000546345 SDCCAG8Q86SQ7 713 aaPredicted RBP6.72□□□□□ -1.33
CCDC60-205ENST00000546345 FAM114A1Q8IWE2 563 aa6.72□□□□□ -1.33
CCDC60-205ENST00000546345 GPD1LQ8N335 351 aa6.72□□□□□ -1.33
CCDC60-205ENST00000546345 FBXO39Q8N4B4 442 aa6.72□□□□□ -1.33
CCDC60-205ENST00000546345 RNF10Q8N5U6 811 aaKnown RBP6.72□□□□□ -1.33
CCDC60-205ENST00000546345 C12orf29Q8N999 325 aa6.72□□□□□ -1.33
CCDC60-205ENST00000546345 RAD54LQ92698 747 aa6.72□□□□□ -1.33
CCDC60-205ENST00000546345 TTC17Q96AE7 1141 aa6.72□□□□□ -1.33
CCDC60-205ENST00000546345 ALS2CR12Q96Q35 445 aa6.72□□□□□ -1.33
CCDC60-205ENST00000546345 TWNKQ96RR1 684 aa6.72□□□□□ -1.33
CCDC60-205ENST00000546345 PAIP2Q9BPZ3 127 aaKnown RBP6.72□□□□□ -1.33
CCDC60-205ENST00000546345 CCDC3Q9BQI4 270 aa6.72□□□□□ -1.33
CCDC60-205ENST00000546345 BOCQ9BWV1 1114 aa6.72□□□□□ -1.33
CCDC60-205ENST00000546345 CALN1Q9BXU9 219 aa6.72□□□□□ -1.33
CCDC60-205ENST00000546345 DCLK3Q9C098 648 aa6.72□□□□□ -1.33
CCDC60-205ENST00000546345 MRPL44Q9H9J2 332 aaKnown RBP6.72□□□□□ -1.33
CCDC60-205ENST00000546345 EPB41L5Q9HCM4 733 aa6.72□□□□□ -1.33
CCDC60-205ENST00000546345 PREBQ9HCU5 417 aa6.72□□□□□ -1.33
CCDC60-205ENST00000546345 CLIC5Q9NZA1 410 aa6.72□□□□□ -1.33
CCDC60-205ENST00000546345 PISDQ9UG56 409 aa6.72□□□□□ -1.33
CCDC60-205ENST00000546345 SUN2Q9UH99 717 aa6.72□□□□□ -1.33
CCDC60-205ENST00000546345 RWDD2AQ9UIY3 292 aa6.72□□□□□ -1.33
CCDC60-205ENST00000546345 SARDHQ9UL12 918 aa6.72□□□□□ -1.33
CCDC60-205ENST00000546345 PNMA8BQ9ULN7 279 aaPredicted RBP6.72□□□□□ -1.33
CCDC60-205ENST00000546345 SRPRBQ9Y5M8 271 aaKnown RBP6.72□□□□□ -1.33
CCDC60-205ENST00000546345 CLIC4Q9Y696 253 aa6.72□□□□□ -1.33
CCDC60-205ENST00000546345 TBC1D3DA0A087WVF3 549 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 TBC1D3IA0A087WXS9 549 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 TBC1D3EA0A087X179 549 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 TBC1D3KA0A087X1G2 549 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 SLC12A8A0AV02 714 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 TBC1D3FA6NER0 549 aaPredicted RBP6.71□□□□□ -1.34
CCDC60-205ENST00000546345 C5orf60A6NFR6 353 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 TBC1D3LB9A6J9 549 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 E7ENQ6 273 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 AGPSO00116 658 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 RNF103O00237 685 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 GSTA4O15217 222 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 MGRN1O60291 552 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 ASMTLO95671 621 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 LDHAP00338 332 aaKnown RBP6.71□□□□□ -1.34
CCDC60-205ENST00000546345 RHOXF2BP0C7M4 288 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 TBC1D3HP0C7X1 549 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 CCKBRP32239 447 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 NUDT1P36639 197 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 STK19P49842 368 aaPredicted RBP6.71□□□□□ -1.34
CCDC60-205ENST00000546345 COG7P83436 770 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 CEBPZQ03701 1054 aaKnown RBP6.71□□□□□ -1.34
CCDC60-205ENST00000546345 EIF3IQ13347 325 aaKnown RBP6.71□□□□□ -1.34
CCDC60-205ENST00000546345 STAT4Q14765 748 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 ZNF284Q2VY69 593 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 SETMARQ53H47 684 aaPredicted RBP6.71□□□□□ -1.34
CCDC60-205ENST00000546345 FAM133BQ5BKY9 247 aaKnown RBP6.71□□□□□ -1.34
CCDC60-205ENST00000546345 FHL5Q5TD97 284 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 TBC1D3GQ6DHY5 549 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 TBC1D3CQ6IPX1 549 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 SHC4Q6S5L8 630 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 RAD9BQ6WBX8 426 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.71□□□□□ -1.34
CCDC60-205ENST00000546345 APTXQ7Z2E3 356 aaKnown RBP6.71□□□□□ -1.34
CCDC60-205ENST00000546345 PRPF39Q86UA1 669 aaKnown RBP6.71□□□□□ -1.34
CCDC60-205ENST00000546345 ZC3H7AQ8IWR0 971 aaKnown RBP6.71□□□□□ -1.34
CCDC60-205ENST00000546345 TBC1D3Q8IZP1 549 aaPredicted RBP6.71□□□□□ -1.34
CCDC60-205ENST00000546345 RBFAQ8N0V3 343 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 PCDH19Q8TAB3 1148 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 PHOSPHO1Q8TCT1 267 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 JPH3Q8WXH2 748 aaPredicted RBP6.71□□□□□ -1.34
CCDC60-205ENST00000546345 CPA5Q8WXQ8 436 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 N4BP2L2Q92802 583 aaPredicted RBP6.71□□□□□ -1.34
CCDC60-205ENST00000546345 KLK6Q92876 244 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 FBXW5Q969U6 566 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 LRRC45Q96CN5 670 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 GDAP1L1Q96MZ0 367 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 CGRRF1Q99675 332 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 RHOXF2Q9BQY4 288 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 TCEAL2Q9H3H9 227 aaPredicted RBP6.71□□□□□ -1.34
CCDC60-205ENST00000546345 MAGEF1Q9HAY2 307 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 PNPLA8Q9NP80 782 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 LZTFL1Q9NQ48 299 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 DNAJC28Q9NX36 388 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 TBC1D7Q9P0N9 293 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 CPSF2Q9P2I0 782 aaKnown RBP6.71□□□□□ -1.34
CCDC60-205ENST00000546345 SLCO3A1Q9UIG8 710 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 MAN1B1Q9UKM7 699 aa6.71□□□□□ -1.34
CCDC60-205ENST00000546345 CAPN11Q9UMQ6 739 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms