RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 FASTKD1Q53R41 847 aaKnown RBP14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 PRAMEF14Q5SWL7 426 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 MICALCLQ6ZW33 695 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 RD3Q7Z3Z2 195 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 TMEM135Q86UB9 458 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 CCNJLQ8IV13 435 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 FBXO36Q8NEA4 188 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 OR4L1Q8NH43 312 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 ULK4Q96C45 1275 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 COX14Q96I36 57 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 TTC25Q96NG3 672 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 FOXP3Q9BZS1 431 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 ZDHHC18Q9NUE0 388 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 ZC3H7BQ9UGR2 993 aaKnown RBP14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 TEX264Q9Y6I9 313 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 TDRD6O60522 2096 aaKnown RBP14.35□□□□□ -0.11
TNFRSF1A-216ENST00000543995 LNP1A1A4G5 178 aa14.35□□□□□ -0.11
TNFRSF1A-216ENST00000543995 TMEM202A6NGA9 273 aa14.35□□□□□ -0.11
TNFRSF1A-216ENST00000543995 E7ESA3 106 aa14.35□□□□□ -0.11
TNFRSF1A-216ENST00000543995 EIF3HO15372 352 aaKnown RBP eCLIP14.35□□□□□ -0.11
TNFRSF1A-216ENST00000543995 GFRA3O60609 400 aa14.35□□□□□ -0.11
TNFRSF1A-216ENST00000543995 MTX2O75431 263 aa14.35□□□□□ -0.11
TNFRSF1A-216ENST00000543995 VAPBO95292 243 aa14.35□□□□□ -0.11
TNFRSF1A-216ENST00000543995 TTC4O95801 387 aa14.35□□□□□ -0.11
TNFRSF1A-216ENST00000543995 CER1O95813 267 aa14.35□□□□□ -0.11
TNFRSF1A-216ENST00000543995 AKT1P31749 480 aa14.35□□□□□ -0.11
TNFRSF1A-216ENST00000543995 CARSP49589 748 aaKnown RBP14.35□□□□□ -0.11
TNFRSF1A-216ENST00000543995 CDKN1CP49918 316 aaPredicted RBP14.35□□□□□ -0.11
TNFRSF1A-216ENST00000543995 PPARDQ03181 441 aa14.35□□□□□ -0.11
TNFRSF1A-216ENST00000543995 FASTKD3Q14CZ7 662 aaKnown RBP14.35□□□□□ -0.11
TNFRSF1A-216ENST00000543995 HLA-BQ31612 363 aa14.35□□□□□ -0.11
TNFRSF1A-216ENST00000543995 GPR33Q49SQ1 333 aa14.35□□□□□ -0.11
TNFRSF1A-216ENST00000543995 ZNF542PQ5EBM4 170 aa14.35□□□□□ -0.11
TNFRSF1A-216ENST00000543995 SPANXN3Q5MJ09 141 aa14.35□□□□□ -0.11
TNFRSF1A-216ENST00000543995 LDLRAP1Q5SW96 308 aa14.35□□□□□ -0.11
TNFRSF1A-216ENST00000543995 ZNF648Q5T619 568 aaPredicted RBP14.35□□□□□ -0.11
TNFRSF1A-216ENST00000543995 GPRC6AQ5T6X5 926 aa14.35□□□□□ -0.11
TNFRSF1A-216ENST00000543995 KIAA0930Q6ICG6 404 aaPredicted RBP14.35□□□□□ -0.11
TNFRSF1A-216ENST00000543995 IGDCC3Q8IVU1 814 aa14.35□□□□□ -0.11
TNFRSF1A-216ENST00000543995 OXR1Q8N573 874 aa14.35□□□□□ -0.11
TNFRSF1A-216ENST00000543995 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.35□□□□□ -0.11
TNFRSF1A-216ENST00000543995 PYROXD1Q8WU10 500 aa14.35□□□□□ -0.11
TNFRSF1A-216ENST00000543995 TSACCQ96A04 125 aaPredicted RBP14.35□□□□□ -0.11
TNFRSF1A-216ENST00000543995 FCRL3Q96P31 734 aaPredicted RBP14.35□□□□□ -0.11
TNFRSF1A-216ENST00000543995 GAREM1Q9H706 876 aa14.35□□□□□ -0.11
TNFRSF1A-216ENST00000543995 ERVMER34-1Q9H9K5 563 aa14.35□□□□□ -0.11
TNFRSF1A-216ENST00000543995 TRIM39Q9HCM9 518 aa14.35□□□□□ -0.11
TNFRSF1A-216ENST00000543995 PARD6AQ9NPB6 346 aa14.35□□□□□ -0.11
TNFRSF1A-216ENST00000543995 MRPL40Q9NQ50 206 aaKnown RBP14.35□□□□□ -0.11
TNFRSF1A-216ENST00000543995 CATSPERZQ9NTU4 200 aa14.35□□□□□ -0.11
TNFRSF1A-216ENST00000543995 SMOXQ9NWM0 555 aa14.35□□□□□ -0.11
TNFRSF1A-216ENST00000543995 TMPRSS11EQ9UL52 423 aa14.35□□□□□ -0.11
TNFRSF1A-216ENST00000543995 OAS3Q9Y6K5 1087 aaKnown RBP14.35□□□□□ -0.11
TNFRSF1A-216ENST00000543995 DMDP11532 3685 aa14.34□□□□□ -0.11
TNFRSF1A-216ENST00000543995 PRSS38A1L453 326 aa14.34□□□□□ -0.11
TNFRSF1A-216ENST00000543995 H3BM21 787 aa14.34□□□□□ -0.11
TNFRSF1A-216ENST00000543995 PRSS56P0CW18 603 aa14.34□□□□□ -0.11
TNFRSF1A-216ENST00000543995 FOXN2P32314 431 aa14.34□□□□□ -0.11
TNFRSF1A-216ENST00000543995 CA5AP35218 305 aa14.34□□□□□ -0.11
TNFRSF1A-216ENST00000543995 POLD2P49005 469 aa14.34□□□□□ -0.11
TNFRSF1A-216ENST00000543995 ARRB1P49407 418 aaPredicted RBP14.34□□□□□ -0.11
TNFRSF1A-216ENST00000543995 BLKP51451 505 aa14.34□□□□□ -0.11
TNFRSF1A-216ENST00000543995 SRP54P61011 504 aaKnown RBP14.34□□□□□ -0.11
TNFRSF1A-216ENST00000543995 THOC5Q13769 683 aaKnown RBP14.34□□□□□ -0.11
TNFRSF1A-216ENST00000543995 GTF2H3Q13889 308 aa14.34□□□□□ -0.11
TNFRSF1A-216ENST00000543995 CRYMQ14894 314 aa14.34□□□□□ -0.11
TNFRSF1A-216ENST00000543995 LONRF1Q17RB8 773 aa14.34□□□□□ -0.11
TNFRSF1A-216ENST00000543995 AASDHQ4L235 1098 aaPredicted RBP14.34□□□□□ -0.11
TNFRSF1A-216ENST00000543995 PSAPL1Q6NUJ1 521 aa14.34□□□□□ -0.11
TNFRSF1A-216ENST00000543995 PRR23CQ6ZRP0 262 aa14.34□□□□□ -0.11
TNFRSF1A-216ENST00000543995 CEP128Q6ZU80 1094 aa14.34□□□□□ -0.11
TNFRSF1A-216ENST00000543995 MARK2Q7KZI7 788 aaKnown RBP14.34□□□□□ -0.11
TNFRSF1A-216ENST00000543995 SERPINA9Q86WD7 417 aa14.34□□□□□ -0.11
TNFRSF1A-216ENST00000543995 HID1Q8IV36 788 aa14.34□□□□□ -0.11
TNFRSF1A-216ENST00000543995 PALM2Q8IXS6 379 aa14.34□□□□□ -0.11
TNFRSF1A-216ENST00000543995 NXPE1Q8N323 547 aa14.34□□□□□ -0.11
TNFRSF1A-216ENST00000543995 GPR161Q8N6U8 529 aaKnown RBP14.34□□□□□ -0.11
TNFRSF1A-216ENST00000543995 DDHD1Q8NEL9 900 aa14.34□□□□□ -0.11
TNFRSF1A-216ENST00000543995 OR2I1PQ8NGU4 316 aa14.34□□□□□ -0.11
TNFRSF1A-216ENST00000543995 UBXN4Q92575 508 aa14.34□□□□□ -0.11
TNFRSF1A-216ENST00000543995 FMO2Q99518 471 aa14.34□□□□□ -0.11
TNFRSF1A-216ENST00000543995 ELF4Q99607 663 aaPredicted RBP14.34□□□□□ -0.11
TNFRSF1A-216ENST00000543995 TTC1Q99614 292 aa14.34□□□□□ -0.11
TNFRSF1A-216ENST00000543995 ZCCHC2Q9C0B9 1178 aaKnown RBP14.34□□□□□ -0.11
TNFRSF1A-216ENST00000543995 PHACTR1Q9C0D0 580 aa14.34□□□□□ -0.11
TNFRSF1A-216ENST00000543995 CYP4F12Q9HCS2 524 aa14.34□□□□□ -0.11
TNFRSF1A-216ENST00000543995 FGF22Q9HCT0 170 aa14.34□□□□□ -0.11
TNFRSF1A-216ENST00000543995 C20orf96Q9NUD7 363 aaPredicted RBP14.34□□□□□ -0.11
TNFRSF1A-216ENST00000543995 IL1RAPL1Q9NZN1 696 aa14.34□□□□□ -0.11
TNFRSF1A-216ENST00000543995 VPS18Q9P253 973 aa14.34□□□□□ -0.11
TNFRSF1A-216ENST00000543995 NFU1Q9UMS0 254 aa14.34□□□□□ -0.11
TNFRSF1A-216ENST00000543995 SLC17A4Q9Y2C5 497 aa14.34□□□□□ -0.11
TNFRSF1A-216ENST00000543995 FAM169AQ9Y6X4 670 aa14.34□□□□□ -0.11
TNFRSF1A-216ENST00000543995 LRP4O75096 1905 aa14.34□□□□□ -0.11
TNFRSF1A-216ENST00000543995 CACNA1EQ15878 2313 aa14.33□□□□□ -0.12
TNFRSF1A-216ENST00000543995 ZCWPW2A0A1B0GU75 182 aa14.33□□□□□ -0.12
TNFRSF1A-216ENST00000543995 GOLGA8KD6RF30 607 aa14.33□□□□□ -0.12
TNFRSF1A-216ENST00000543995 GOLGA8TH3BQL2 631 aa14.33□□□□□ -0.12
TNFRSF1A-216ENST00000543995 TNFRSF10CO14798 259 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms