RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 SRP72O76094 671 aaKnown RBP8.63□□□□□ -1.03
THBS3-210ENST00000541576 VIPR1P32241 457 aa8.63□□□□□ -1.03
THBS3-210ENST00000541576 SPAM1P38567 509 aa8.63□□□□□ -1.03
THBS3-210ENST00000541576 PTDSS1P48651 473 aaKnown RBP8.63□□□□□ -1.03
THBS3-210ENST00000541576 PTSQ03393 145 aa8.63□□□□□ -1.03
THBS3-210ENST00000541576 KLC1Q07866 573 aa8.63□□□□□ -1.03
THBS3-210ENST00000541576 OVGP1Q12889 678 aa8.63□□□□□ -1.03
THBS3-210ENST00000541576 TSNAXIP1Q2TAA8 658 aa8.63□□□□□ -1.03
THBS3-210ENST00000541576 CES4AQ5XG92 561 aa8.63□□□□□ -1.03
THBS3-210ENST00000541576 ZNF549Q6P9A3 640 aa8.63□□□□□ -1.03
THBS3-210ENST00000541576 CHPFQ8IZ52 775 aa8.63□□□□□ -1.03
THBS3-210ENST00000541576 PIP4K2CQ8TBX8 421 aa8.63□□□□□ -1.03
THBS3-210ENST00000541576 LRRC8CQ8TDW0 803 aa8.63□□□□□ -1.03
THBS3-210ENST00000541576 DNAJC9Q8WXX5 260 aa8.63□□□□□ -1.03
THBS3-210ENST00000541576 LPGAT1Q92604 370 aa8.63□□□□□ -1.03
THBS3-210ENST00000541576 TSNARE1Q96NA8 513 aa8.63□□□□□ -1.03
THBS3-210ENST00000541576 C1QTNF1Q9BXJ1 281 aa8.63□□□□□ -1.03
THBS3-210ENST00000541576 KCNK12Q9HB15 430 aa8.63□□□□□ -1.03
THBS3-210ENST00000541576 LIMD1Q9UGP4 676 aa8.63□□□□□ -1.03
THBS3-210ENST00000541576 PPM1HQ9ULR3 514 aa8.63□□□□□ -1.03
THBS3-210ENST00000541576 MTF2Q9Y483 593 aaPredicted RBP8.63□□□□□ -1.03
THBS3-210ENST00000541576 SCN8AQ9UQD0 1980 aa8.63□□□□□ -1.03
THBS3-210ENST00000541576 GPR39O43194 453 aa8.63□□□□□ -1.03
THBS3-210ENST00000541576 IL1BP01584 269 aa8.63□□□□□ -1.03
THBS3-210ENST00000541576 PROCP04070 461 aa8.63□□□□□ -1.03
THBS3-210ENST00000541576 ZNF30P17039 623 aa8.63□□□□□ -1.03
THBS3-210ENST00000541576 GM2AP17900 193 aa8.63□□□□□ -1.03
THBS3-210ENST00000541576 ITGALP20701 1170 aa8.63□□□□□ -1.03
THBS3-210ENST00000541576 BGNP21810 368 aa8.63□□□□□ -1.03
THBS3-210ENST00000541576 CTHP32929 405 aa8.63□□□□□ -1.03
THBS3-210ENST00000541576 PTPN5P54829 565 aa8.63□□□□□ -1.03
THBS3-210ENST00000541576 FAM45BPQ6NSW5 357 aa8.63□□□□□ -1.03
THBS3-210ENST00000541576 CGB2Q6NT52 195 aa8.63□□□□□ -1.03
THBS3-210ENST00000541576 ERAP2Q6P179 960 aa8.63□□□□□ -1.03
THBS3-210ENST00000541576 PARS2Q7L3T8 475 aaKnown RBP8.63□□□□□ -1.03
THBS3-210ENST00000541576 SNX20Q7Z614 316 aa8.63□□□□□ -1.03
THBS3-210ENST00000541576 DSG4Q86SJ6 1040 aa8.63□□□□□ -1.03
THBS3-210ENST00000541576 SPATA6LQ8N4H0 392 aa8.63□□□□□ -1.03
THBS3-210ENST00000541576 FAM45AQ8TCE6 357 aa8.63□□□□□ -1.03
THBS3-210ENST00000541576 FAM129BQ96TA1 746 aa8.63□□□□□ -1.03
THBS3-210ENST00000541576 CCDC68Q9H2F9 335 aa8.63□□□□□ -1.03
THBS3-210ENST00000541576 ASB8Q9H765 288 aa8.63□□□□□ -1.03
THBS3-210ENST00000541576 MANSC1Q9H8J5 431 aa8.63□□□□□ -1.03
THBS3-210ENST00000541576 ARL2BPQ9Y2Y0 163 aa8.63□□□□□ -1.03
THBS3-210ENST00000541576 SPECC1L-ADORA2AF8WAN1 911 aa8.62□□□□□ -1.03
THBS3-210ENST00000541576 GAPDHSO14556 408 aaPredicted RBP8.62□□□□□ -1.03
THBS3-210ENST00000541576 BAG2O95816 211 aa8.62□□□□□ -1.03
THBS3-210ENST00000541576 BPGMP07738 259 aa8.62□□□□□ -1.03
THBS3-210ENST00000541576 COL6A2P12110 1019 aa8.62□□□□□ -1.03
THBS3-210ENST00000541576 HNRNPLP14866 589 aaKnown RBP eCLIP8.62□□□□□ -1.03
THBS3-210ENST00000541576 ITGB7P26010 798 aa8.62□□□□□ -1.03
THBS3-210ENST00000541576 CA5AP35218 305 aa8.62□□□□□ -1.03
THBS3-210ENST00000541576 TNFRSF4P43489 277 aa8.62□□□□□ -1.03
THBS3-210ENST00000541576 CDKN2DP55273 166 aa8.62□□□□□ -1.03
THBS3-210ENST00000541576 TIAL1Q01085 375 aaKnown RBP eCLIP8.62□□□□□ -1.03
THBS3-210ENST00000541576 DLG1Q12959 904 aa8.62□□□□□ -1.03
THBS3-210ENST00000541576 NFATC2Q13469 925 aa8.62□□□□□ -1.03
THBS3-210ENST00000541576 LRRC23Q53EV4 343 aaPredicted RBP8.62□□□□□ -1.03
THBS3-210ENST00000541576 ZDHHC20Q5W0Z9 365 aa8.62□□□□□ -1.03
THBS3-210ENST00000541576 CWF19L1Q69YN2 538 aaKnown RBP8.62□□□□□ -1.03
THBS3-210ENST00000541576 TXNDC11Q6PKC3 985 aa8.62□□□□□ -1.03
THBS3-210ENST00000541576 CERS6Q6ZMG9 384 aa8.62□□□□□ -1.03
THBS3-210ENST00000541576 LCA5Q86VQ0 697 aa8.62□□□□□ -1.03
THBS3-210ENST00000541576 CENPLQ8N0S6 344 aaPredicted RBP8.62□□□□□ -1.03
THBS3-210ENST00000541576 ZNF513Q8N8E2 541 aaPredicted RBP8.62□□□□□ -1.03
THBS3-210ENST00000541576 KCTD4Q8WVF5 259 aa8.62□□□□□ -1.03
THBS3-210ENST00000541576 PPP1R16AQ96I34 528 aa8.62□□□□□ -1.03
THBS3-210ENST00000541576 GBP5Q96PP8 586 aa8.62□□□□□ -1.03
THBS3-210ENST00000541576 PRSS16Q9NQE7 514 aa8.62□□□□□ -1.03
THBS3-210ENST00000541576 STON1Q9Y6Q2 735 aa8.62□□□□□ -1.03
THBS3-210ENST00000541576 ATG2BQ96BY7 2078 aa8.62□□□□□ -1.03
THBS3-210ENST00000541576 MYO10Q9HD67 2058 aa8.62□□□□□ -1.03
THBS3-210ENST00000541576 A0A087X1B8 175 aa8.62□□□□□ -1.03
THBS3-210ENST00000541576 CCDC160A6NGH7 325 aa8.62□□□□□ -1.03
THBS3-210ENST00000541576 NPC1O15118 1278 aa8.62□□□□□ -1.03
THBS3-210ENST00000541576 C1SP09871 688 aa8.62□□□□□ -1.03
THBS3-210ENST00000541576 FMO4P31512 558 aa8.62□□□□□ -1.03
THBS3-210ENST00000541576 PPARGP37231 505 aaPredicted RBP8.62□□□□□ -1.03
THBS3-210ENST00000541576 CCDC153Q494R4 210 aa8.62□□□□□ -1.03
THBS3-210ENST00000541576 RFLNAQ6ZTI6 216 aa8.62□□□□□ -1.03
THBS3-210ENST00000541576 DPPA4Q7L190 304 aa8.62□□□□□ -1.03
THBS3-210ENST00000541576 TMEM151AQ8N4L1 468 aa8.62□□□□□ -1.03
THBS3-210ENST00000541576 SLC44A3Q8N4M1 653 aa8.62□□□□□ -1.03
THBS3-210ENST00000541576 GPR26Q8NDV2 337 aa8.62□□□□□ -1.03
THBS3-210ENST00000541576 ZNF398Q8TD17 642 aa8.62□□□□□ -1.03
THBS3-210ENST00000541576 UTP4Q969X6 686 aaKnown RBP8.62□□□□□ -1.03
THBS3-210ENST00000541576 GPR78Q96P69 363 aa8.62□□□□□ -1.03
THBS3-210ENST00000541576 TTC1Q99614 292 aa8.62□□□□□ -1.03
THBS3-210ENST00000541576 CDX2Q99626 313 aaPredicted RBP8.62□□□□□ -1.03
THBS3-210ENST00000541576 AARSD1Q9BTE6 412 aaKnown RBP8.62□□□□□ -1.03
THBS3-210ENST00000541576 PHF7Q9BWX1 381 aaPredicted RBP8.62□□□□□ -1.03
THBS3-210ENST00000541576 UNKQ9C0B0 810 aaKnown RBP8.62□□□□□ -1.03
THBS3-210ENST00000541576 OCEL1Q9H607 264 aa8.62□□□□□ -1.03
THBS3-210ENST00000541576 ZNF395Q9H8N7 513 aaPredicted RBP8.62□□□□□ -1.03
THBS3-210ENST00000541576 GPAMQ9HCL2 828 aa8.62□□□□□ -1.03
THBS3-210ENST00000541576 TRPV5Q9NQA5 729 aa8.62□□□□□ -1.03
THBS3-210ENST00000541576 DYRK4Q9NR20 520 aa8.62□□□□□ -1.03
THBS3-210ENST00000541576 PKD2L2Q9NZM6 624 aa8.62□□□□□ -1.03
THBS3-210ENST00000541576 SIRPGQ9P1W8 387 aa8.62□□□□□ -1.03
THBS3-210ENST00000541576 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms