RNA–Protein interactions for RNA: ENST00000539241.1

CCND1-204, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-204ENST00000539241 HAUS2Q9NVX0 235 aa13.9□□□□□ -0.18
CCND1-204ENST00000539241 RBM22Q9NW64 420 aaKnown RBP eCLIP13.9□□□□□ -0.183e-6■■■□□ 15.3
CCND1-204ENST00000539241 DNPEPQ9ULA0 475 aa13.9□□□□□ -0.18
CCND1-204ENST00000539241 PACSIN2Q9UNF0 486 aaPredicted RBP13.9□□□□□ -0.18
CCND1-204ENST00000539241 CHKBQ9Y259 395 aa13.9□□□□□ -0.18
CCND1-204ENST00000539241 IGHV1OR21-1A0A087WYE8 117 aa13.89□□□□□ -0.19
CCND1-204ENST00000539241 INPP4BO15327 924 aa13.89□□□□□ -0.19
CCND1-204ENST00000539241 DDX3YO15523 660 aaKnown RBP13.89□□□□□ -0.19
CCND1-204ENST00000539241 CA4P22748 312 aa13.89□□□□□ -0.19
CCND1-204ENST00000539241 CCNCP24863 283 aa13.89□□□□□ -0.19
CCND1-204ENST00000539241 MSNP26038 577 aaKnown RBP13.89□□□□□ -0.19
CCND1-204ENST00000539241 CDKN2BP42772 138 aa13.89□□□□□ -0.19
CCND1-204ENST00000539241 LIMK2P53671 638 aa13.89□□□□□ -0.19
CCND1-204ENST00000539241 COPS2P61201 443 aa13.89□□□□□ -0.19
CCND1-204ENST00000539241 TRA2AQ13595 282 aaKnown RBP eCLIP13.89□□□□□ -0.19
CCND1-204ENST00000539241 IHHQ14623 411 aa13.89□□□□□ -0.19
CCND1-204ENST00000539241 PPP2R5EQ16537 467 aa13.89□□□□□ -0.19
CCND1-204ENST00000539241 LINC00303Q3SY05 128 aa13.89□□□□□ -0.19
CCND1-204ENST00000539241 PYCR3Q53H96 274 aa13.89□□□□□ -0.19
CCND1-204ENST00000539241 TFDP3Q5H9I0 405 aa13.89□□□□□ -0.19
CCND1-204ENST00000539241 MEI1Q5TIA1 1274 aa13.89□□□□□ -0.19
CCND1-204ENST00000539241 GALNT13Q8IUC8 556 aa13.89□□□□□ -0.19
CCND1-204ENST00000539241 CCDC50Q8IVM0 306 aa13.89□□□□□ -0.19
CCND1-204ENST00000539241 NRSN1Q8IZ57 195 aa13.89□□□□□ -0.19
CCND1-204ENST00000539241 PQLC3Q8N755 202 aa13.89□□□□□ -0.19
CCND1-204ENST00000539241 EXD3Q8N9H8 876 aa13.89□□□□□ -0.19
CCND1-204ENST00000539241 LPCAT1Q8NF37 534 aa13.89□□□□□ -0.19
CCND1-204ENST00000539241 OR4D9Q8NGE8 314 aa13.89□□□□□ -0.19
CCND1-204ENST00000539241 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.89□□□□□ -0.19
CCND1-204ENST00000539241 EXTL1Q92935 676 aa13.89□□□□□ -0.19
CCND1-204ENST00000539241 FATE1Q969F0 183 aa13.89□□□□□ -0.19
CCND1-204ENST00000539241 TRIM44Q96DX7 344 aaPredicted RBP13.89□□□□□ -0.19
CCND1-204ENST00000539241 COX14Q96I36 57 aa13.89□□□□□ -0.19
CCND1-204ENST00000539241 TSGA13Q96PP4 275 aa13.89□□□□□ -0.19
CCND1-204ENST00000539241 RIOK2Q9BVS4 552 aaKnown RBP13.89□□□□□ -0.19
CCND1-204ENST00000539241 KCNK4Q9NYG8 393 aa13.89□□□□□ -0.19
CCND1-204ENST00000539241 AMACRQ9UHK6 382 aa13.89□□□□□ -0.19
CCND1-204ENST00000539241 PCDHGA4Q9Y5G9 962 aa13.89□□□□□ -0.19
CCND1-204ENST00000539241 ARHGEF17Q96PE2 2063 aaPredicted RBP13.89□□□□□ -0.19
CCND1-204ENST00000539241 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.88□□□□□ -0.19
CCND1-204ENST00000539241 STMND1H3BQB6 276 aa13.88□□□□□ -0.19
CCND1-204ENST00000539241 CLDN7O95471 211 aa13.88□□□□□ -0.19
CCND1-204ENST00000539241 ASMTLO95671 621 aa13.88□□□□□ -0.19
CCND1-204ENST00000539241 PRLP01236 227 aa13.88□□□□□ -0.19
CCND1-204ENST00000539241 ITGB2P05107 769 aa13.88□□□□□ -0.19
CCND1-204ENST00000539241 HLA-DQB2P05538 268 aa13.88□□□□□ -0.19
CCND1-204ENST00000539241 THRAP10827 490 aa13.88□□□□□ -0.19
CCND1-204ENST00000539241 FGF3P11487 239 aaPredicted RBP13.88□□□□□ -0.19
CCND1-204ENST00000539241 MX2P20592 715 aa13.88□□□□□ -0.19
CCND1-204ENST00000539241 CSF2RBP32927 897 aa13.88□□□□□ -0.19
CCND1-204ENST00000539241 PTPN7P35236 360 aa13.88□□□□□ -0.19
CCND1-204ENST00000539241 CETN2P41208 172 aa13.88□□□□□ -0.19
CCND1-204ENST00000539241 NIPAL4Q0D2K0 466 aa13.88□□□□□ -0.19
CCND1-204ENST00000539241 SQSTM1Q13501 440 aa13.88□□□□□ -0.19
CCND1-204ENST00000539241 LRP8Q14114 963 aa13.88□□□□□ -0.19
CCND1-204ENST00000539241 TFDP2Q14188 446 aa13.88□□□□□ -0.19
CCND1-204ENST00000539241 RPS6KA1Q15418 735 aa13.88□□□□□ -0.19
CCND1-204ENST00000539241 ZNF569Q5MCW4 686 aa13.88□□□□□ -0.19
CCND1-204ENST00000539241 SLC9A4Q6AI14 798 aa13.88□□□□□ -0.19
CCND1-204ENST00000539241 XKR5Q6UX68 686 aa13.88□□□□□ -0.19
CCND1-204ENST00000539241 RAVER1Q8IY67 606 aaKnown RBP13.88□□□□□ -0.19
CCND1-204ENST00000539241 ZSCAN1Q8NBB4 408 aa13.88□□□□□ -0.19
CCND1-204ENST00000539241 ARRDC2Q8TBH0 407 aa13.88□□□□□ -0.19
CCND1-204ENST00000539241 SLC37A2Q8TED4 501 aa13.88□□□□□ -0.19
CCND1-204ENST00000539241 LRRN4Q8WUT4 740 aa13.88□□□□□ -0.19
CCND1-204ENST00000539241 TAAR9Q96RI9 348 aa13.88□□□□□ -0.19
CCND1-204ENST00000539241 LYSMD1Q96S90 227 aa13.88□□□□□ -0.19
CCND1-204ENST00000539241 DPYSL5Q9BPU6 564 aa13.88□□□□□ -0.19
CCND1-204ENST00000539241 ARHGAP9Q9BRR9 750 aa13.88□□□□□ -0.19
CCND1-204ENST00000539241 MAK16Q9BXY0 300 aaKnown RBP13.88□□□□□ -0.19
CCND1-204ENST00000539241 ZMYND15Q9H091 742 aa13.88□□□□□ -0.19
CCND1-204ENST00000539241 PCDH9Q9HC56 1237 aa13.88□□□□□ -0.19
CCND1-204ENST00000539241 MAST4O15021 2626 aa13.87□□□□□ -0.19
CCND1-204ENST00000539241 TRBV23OR9-2A0A075B6M9 112 aa13.87□□□□□ -0.19
CCND1-204ENST00000539241 hCG_1818297A0A087WSY0 165 aa13.87□□□□□ -0.19
CCND1-204ENST00000539241 APOL1O14791 398 aa13.87□□□□□ -0.19
CCND1-204ENST00000539241 SLC28A2O43868 658 aa13.87□□□□□ -0.19
CCND1-204ENST00000539241 ZFXP17010 805 aaPredicted RBP13.87□□□□□ -0.19
CCND1-204ENST00000539241 WT1P19544 449 aaPredicted RBP13.87□□□□□ -0.19
CCND1-204ENST00000539241 MPSTP25325 297 aa13.87□□□□□ -0.19
CCND1-204ENST00000539241 CSTF2P33240 577 aaKnown RBP eCLIP13.87□□□□□ -0.19
CCND1-204ENST00000539241 FASLGP48023 281 aa13.87□□□□□ -0.19
CCND1-204ENST00000539241 RPL26P61254 145 aaKnown RBP13.87□□□□□ -0.19
CCND1-204ENST00000539241 GPLD1P80108 840 aa13.87□□□□□ -0.19
CCND1-204ENST00000539241 GBE1Q04446 702 aa13.87□□□□□ -0.19
CCND1-204ENST00000539241 NFATC3Q12968 1075 aa13.87□□□□□ -0.19
CCND1-204ENST00000539241 ZNF761Q86XN6 746 aaPredicted RBP13.87□□□□□ -0.19
CCND1-204ENST00000539241 RFX6Q8HWS3 928 aa13.87□□□□□ -0.19
CCND1-204ENST00000539241 SLC35F6Q8N357 371 aa13.87□□□□□ -0.19
CCND1-204ENST00000539241 SFRP1Q8N474 314 aa13.87□□□□□ -0.19
CCND1-204ENST00000539241 AGBL5Q8NDL9 886 aa13.87□□□□□ -0.19
CCND1-204ENST00000539241 JPH3Q8WXH2 748 aaPredicted RBP13.87□□□□□ -0.19
CCND1-204ENST00000539241 PMEPA1Q969W9 287 aa13.87□□□□□ -0.19
CCND1-204ENST00000539241 HDAC11Q96DB2 347 aa13.87□□□□□ -0.19
CCND1-204ENST00000539241 TLR10Q9BXR5 811 aa13.87□□□□□ -0.19
CCND1-204ENST00000539241 CARD9Q9H257 536 aa13.87□□□□□ -0.19
CCND1-204ENST00000539241 TMEM9Q9P0T7 183 aa13.87□□□□□ -0.19
CCND1-204ENST00000539241 ZNHIT2Q9UHR6 403 aa13.87□□□□□ -0.19
CCND1-204ENST00000539241 RPL26L1Q9UNX3 145 aaKnown RBP13.87□□□□□ -0.19
CCND1-204ENST00000539241 EFR3BQ9Y2G0 817 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms