RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 ANXA8P13928 327 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 GRIA1P42261 906 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 CCR10P46092 362 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 JAM2P57087 298 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 TMEM62Q0P6H9 643 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 RHEBQ15382 184 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 DPY19L1Q2PZI1 675 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 ACSBG2Q5FVE4 666 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 SNAP47Q5SQN1 464 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 RNASEH2BQ5TBB1 312 aaKnown RBP6.88□□□□□ -1.31
SORT1-209ENST00000538502 ANO7Q6IWH7 933 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 AHSA2Q719I0 299 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 KCNK18Q7Z418 384 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 FAM98AQ8NCA5 519 aaKnown RBP6.88□□□□□ -1.31
SORT1-209ENST00000538502 AURKBQ96GD4 344 aaPredicted RBP6.88□□□□□ -1.31
SORT1-209ENST00000538502 MTRRQ9UBK8 725 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 ZNF780BQ9Y6R6 833 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 KMOO15229 486 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 SLC25A12O75746 678 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 RPP40O75818 363 aaKnown RBP6.88□□□□□ -1.31
SORT1-209ENST00000538502 TOP3BO95985 862 aaKnown RBP6.88□□□□□ -1.31
SORT1-209ENST00000538502 BMP6P22004 513 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 SLC9A3P48764 834 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 FKBP1AP62942 108 aaKnown RBP6.88□□□□□ -1.31
SORT1-209ENST00000538502 PPATQ06203 517 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 FAM189A2Q15884 450 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 SNAPC1Q16533 368 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 WSCD2Q2TBF2 565 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 SETMARQ53H47 684 aaPredicted RBP6.88□□□□□ -1.31
SORT1-209ENST00000538502 LGI2Q8N0V4 545 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 NATD1Q8N6N6 113 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 INO80EQ8NBZ0 244 aaPredicted RBP6.88□□□□□ -1.31
SORT1-209ENST00000538502 SRFBP1Q8NEF9 429 aaKnown RBP6.88□□□□□ -1.31
SORT1-209ENST00000538502 SLC2A14Q8TDB8 520 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 FEM1CQ96JP0 617 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 C8orf48Q96LL4 319 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 FCRL4Q96PJ5 515 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 COPS4Q9BT78 406 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 CNPPD1Q9BV87 410 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 CCSER2Q9H7U1 834 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 TNFSF13BQ9Y275 285 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 JCADQ9P266 1359 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 COL3A1P02461 1466 aaPredicted RBP6.88□□□□□ -1.31
SORT1-209ENST00000538502 CEP170BQ9Y4F5 1589 aaPredicted RBP6.88□□□□□ -1.31
SORT1-209ENST00000538502 MROH2AA6NES4 1674 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 PPRC1Q5VV67 1664 aaKnown RBP6.88□□□□□ -1.31
SORT1-209ENST00000538502 LRRC14BA6NHZ5 514 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 TRIM64CA6NLI5 447 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 RIIAD1A6NNX1 92 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 PRMT3O60678 531 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 NOL4O94818 638 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 CTSHP09668 335 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 SLC2A2P11168 524 aaPredicted RBP6.88□□□□□ -1.31
SORT1-209ENST00000538502 SNRPD1P62314 119 aaKnown RBP6.88□□□□□ -1.31
SORT1-209ENST00000538502 TIGD6Q17RP2 521 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 EARS2Q5JPH6 523 aaKnown RBP6.88□□□□□ -1.31
SORT1-209ENST00000538502 HECTD2Q5U5R9 776 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 C1orf189Q5VU69 101 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 GARNL3Q5VVW2 1013 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 C11orf65Q8NCR3 313 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 PLEKHO2Q8TD55 490 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 CLP1Q92989 425 aaKnown RBP6.88□□□□□ -1.31
SORT1-209ENST00000538502 LINGO1Q96FE5 620 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 ZNF285Q96NJ3 590 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 GBA3Q9H227 469 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 RANBP3Q9H6Z4 567 aaPredicted RBP6.88□□□□□ -1.31
SORT1-209ENST00000538502 SPATA31D1Q6ZQQ2 1576 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 VWDEQ8N2E2 1590 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 FAM234BA2RU67 622 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 TTLL13PA6NNM8 815 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 ENTPD6O75354 484 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 RB1P06400 928 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 PSKH1P11801 424 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 CKBP12277 381 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 NPR2P20594 1047 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 ITGA3P26006 1051 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 GRIA2P42262 883 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 KIR3DL1P43629 444 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 ARCN1P48444 511 aaKnown RBP6.88□□□□□ -1.31
SORT1-209ENST00000538502 S100A12P80511 92 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 ACOX1Q15067 660 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 JAZF1Q86VZ6 243 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 TNS4Q8IZW8 715 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 ZNF548Q8NEK5 533 aaPredicted RBP6.88□□□□□ -1.31
SORT1-209ENST00000538502 PIGXQ8TBF5 258 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 ELMO1Q92556 727 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 KCTD7Q96MP8 289 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 PTPRHQ9HD43 1115 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 MKS1Q9NXB0 559 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 ATPIF1Q9UII2 106 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 PTCH2Q9Y6C5 1203 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 OAS3Q9Y6K5 1087 aaKnown RBP6.88□□□□□ -1.31
SORT1-209ENST00000538502 DIP2AQ14689 1571 aa6.88□□□□□ -1.31
SORT1-209ENST00000538502 OR6C70A6NIJ9 312 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 CENPBD1B2RD01 187 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 SRPRAP08240 638 aaKnown RBP6.87□□□□□ -1.31
SORT1-209ENST00000538502 HNRNPLP14866 589 aaKnown RBP eCLIP6.87□□□□□ -1.311e-9■■■■■ 31.6
SORT1-209ENST00000538502 MATKP42679 507 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 CLCN3P51790 818 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 HUNKP57058 714 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms