RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 LAG3P18627 525 aa13.9□□□□□ -0.18
LIMK1-208ENST00000538333 MMEL1Q495T6 779 aa13.9□□□□□ -0.18
LIMK1-208ENST00000538333 PABPC1LQ4VXU2 614 aaKnown RBP13.9□□□□□ -0.18
LIMK1-208ENST00000538333 GAREM2Q75VX8 874 aa13.9□□□□□ -0.18
LIMK1-208ENST00000538333 LYSMD3Q7Z3D4 306 aa13.9□□□□□ -0.18
LIMK1-208ENST00000538333 MFN1Q8IWA4 741 aa13.9□□□□□ -0.18
LIMK1-208ENST00000538333 FAM156AQ8NDB6 213 aa13.9□□□□□ -0.18
LIMK1-208ENST00000538333 ZNF483Q8TF39 744 aaPredicted RBP13.9□□□□□ -0.18
LIMK1-208ENST00000538333 DLG3Q92796 817 aa13.9□□□□□ -0.18
LIMK1-208ENST00000538333 BHMTQ93088 406 aa13.9□□□□□ -0.18
LIMK1-208ENST00000538333 ASB9Q96DX5 294 aa13.9□□□□□ -0.18
LIMK1-208ENST00000538333 MYO19Q96H55 970 aa13.9□□□□□ -0.18
LIMK1-208ENST00000538333 SEMA4BQ9NPR2 832 aaPredicted RBP13.9□□□□□ -0.18
LIMK1-208ENST00000538333 SUCOQ9UBS9 1254 aaKnown RBP13.9□□□□□ -0.18
LIMK1-208ENST00000538333 GIMAP2Q9UG22 337 aa13.9□□□□□ -0.18
LIMK1-208ENST00000538333 ZNF225Q9UK10 706 aa13.9□□□□□ -0.18
LIMK1-208ENST00000538333 PCTPQ9UKL6 214 aa13.9□□□□□ -0.18
LIMK1-208ENST00000538333 MAFFQ9ULX9 164 aa13.9□□□□□ -0.18
LIMK1-208ENST00000538333 PKP3Q9Y446 797 aa13.9□□□□□ -0.18
LIMK1-208ENST00000538333 GAPDHSO14556 408 aaPredicted RBP13.9□□□□□ -0.18
LIMK1-208ENST00000538333 MRASO14807 208 aa13.9□□□□□ -0.18
LIMK1-208ENST00000538333 SMAD6O43541 496 aaKnown RBP13.9□□□□□ -0.18
LIMK1-208ENST00000538333 ALPIP09923 528 aa13.9□□□□□ -0.18
LIMK1-208ENST00000538333 BMP1P13497 986 aa13.9□□□□□ -0.18
LIMK1-208ENST00000538333 AGTR2P50052 363 aa13.9□□□□□ -0.18
LIMK1-208ENST00000538333 CLCN7P51798 805 aa13.9□□□□□ -0.18
LIMK1-208ENST00000538333 AQP4P55087 323 aa13.9□□□□□ -0.18
LIMK1-208ENST00000538333 IL2P60568 153 aa13.9□□□□□ -0.18
LIMK1-208ENST00000538333 NAA20P61599 178 aa13.9□□□□□ -0.18
LIMK1-208ENST00000538333 CACNG1Q06432 222 aa13.9□□□□□ -0.18
LIMK1-208ENST00000538333 GRB7Q14451 532 aa13.9□□□□□ -0.18
LIMK1-208ENST00000538333 GEN1Q17RS7 908 aa13.9□□□□□ -0.18
LIMK1-208ENST00000538333 ARMC12Q5T9G4 340 aa13.9□□□□□ -0.18
LIMK1-208ENST00000538333 ITIH5Q86UX2 942 aa13.9□□□□□ -0.18
LIMK1-208ENST00000538333 CAMK1DQ8IU85 385 aa13.9□□□□□ -0.18
LIMK1-208ENST00000538333 CPNE9Q8IYJ1 553 aa13.9□□□□□ -0.18
LIMK1-208ENST00000538333 CMTR2Q8IYT2 770 aaKnown RBP13.9□□□□□ -0.18
LIMK1-208ENST00000538333 STK40Q8N2I9 435 aa13.9□□□□□ -0.18
LIMK1-208ENST00000538333 PLCD3Q8N3E9 789 aa13.9□□□□□ -0.18
LIMK1-208ENST00000538333 LINGO1Q96FE5 620 aa13.9□□□□□ -0.18
LIMK1-208ENST00000538333 KLHL32Q96NJ5 620 aa13.9□□□□□ -0.18
LIMK1-208ENST00000538333 TM6SF2Q9BZW4 377 aa13.9□□□□□ -0.18
LIMK1-208ENST00000538333 MRPL17Q9NRX2 175 aaKnown RBP13.9□□□□□ -0.18
LIMK1-208ENST00000538333 ADA2Q9NZK5 511 aa13.9□□□□□ -0.18
LIMK1-208ENST00000538333 CD300AQ9UGN4 299 aa13.9□□□□□ -0.18
LIMK1-208ENST00000538333 POLG2Q9UHN1 485 aa13.9□□□□□ -0.18
LIMK1-208ENST00000538333 RIMS3Q9UJD0 308 aa13.9□□□□□ -0.18
LIMK1-208ENST00000538333 PRSS51A0A1B0GVH4 220 aa13.89□□□□□ -0.19
LIMK1-208ENST00000538333 MAGEA13PA6NCF6 341 aa13.89□□□□□ -0.19
LIMK1-208ENST00000538333 SPATA31D3P0C874 917 aa13.89□□□□□ -0.19
LIMK1-208ENST00000538333 CTPS1P17812 591 aa13.89□□□□□ -0.19
LIMK1-208ENST00000538333 PRDX3P30048 256 aaKnown RBP13.89□□□□□ -0.19
LIMK1-208ENST00000538333 STX1BP61266 288 aa13.89□□□□□ -0.19
LIMK1-208ENST00000538333 CYP4F8P98187 520 aa13.89□□□□□ -0.19
LIMK1-208ENST00000538333 CAPRIN2Q6IMN6 1127 aaKnown RBP13.89□□□□□ -0.19
LIMK1-208ENST00000538333 UGT3A1Q6NUS8 523 aa13.89□□□□□ -0.19
LIMK1-208ENST00000538333 TXNDC11Q6PKC3 985 aa13.89□□□□□ -0.19
LIMK1-208ENST00000538333 SPATA31D4Q6ZUB0 917 aa13.89□□□□□ -0.19
LIMK1-208ENST00000538333 TMEM126BQ8IUX1 230 aa13.89□□□□□ -0.19
LIMK1-208ENST00000538333 GRIN3AQ8TCU5 1115 aa13.89□□□□□ -0.19
LIMK1-208ENST00000538333 GPR63Q9BZJ6 419 aa13.89□□□□□ -0.19
LIMK1-208ENST00000538333 PTPRSQ13332 1948 aa13.89□□□□□ -0.19
LIMK1-208ENST00000538333 PRORSD1PA6NEY8 169 aa13.89□□□□□ -0.19
LIMK1-208ENST00000538333 NCF1BA6NI72 391 aaPredicted RBP13.89□□□□□ -0.19
LIMK1-208ENST00000538333 IQCF5A8MTL0 148 aa13.89□□□□□ -0.19
LIMK1-208ENST00000538333 NCF1CA8MVU1 366 aaPredicted RBP13.89□□□□□ -0.19
LIMK1-208ENST00000538333 HTRA2O43464 458 aaPredicted RBP13.89□□□□□ -0.19
LIMK1-208ENST00000538333 LINGO3P0C6S8 592 aa13.89□□□□□ -0.19
LIMK1-208ENST00000538333 PRR35P0CG20 571 aa13.89□□□□□ -0.19
LIMK1-208ENST00000538333 NCF1P14598 390 aaPredicted RBP13.89□□□□□ -0.19
LIMK1-208ENST00000538333 TCN1P20061 433 aaPredicted RBP13.89□□□□□ -0.19
LIMK1-208ENST00000538333 CHRM3P20309 590 aa13.89□□□□□ -0.19
LIMK1-208ENST00000538333 GABRR2P28476 465 aa13.89□□□□□ -0.19
LIMK1-208ENST00000538333 RFC2P35250 354 aa13.89□□□□□ -0.19
LIMK1-208ENST00000538333 ECT2LQ008S8 904 aa13.89□□□□□ -0.19
LIMK1-208ENST00000538333 ADGRE1Q14246 886 aa13.89□□□□□ -0.19
LIMK1-208ENST00000538333 TRIM25Q14258 630 aaKnown RBP13.89□□□□□ -0.19
LIMK1-208ENST00000538333 OR52E8Q6IFG1 317 aa13.89□□□□□ -0.19
LIMK1-208ENST00000538333 HTR3DQ70Z44 454 aa13.89□□□□□ -0.19
LIMK1-208ENST00000538333 TAS2R42Q7RTR8 314 aa13.89□□□□□ -0.19
LIMK1-208ENST00000538333 SYVN1Q86TM6 617 aa13.89□□□□□ -0.19
LIMK1-208ENST00000538333 RETREG3Q86VR2 466 aa13.89□□□□□ -0.19
LIMK1-208ENST00000538333 TMC8Q8IU68 726 aa13.89□□□□□ -0.19
LIMK1-208ENST00000538333 DDIASQ8IXT1 998 aa13.89□□□□□ -0.19
LIMK1-208ENST00000538333 LILRA2Q8N149 483 aa13.89□□□□□ -0.19
LIMK1-208ENST00000538333 CPXM2Q8N436 756 aa13.89□□□□□ -0.19
LIMK1-208ENST00000538333 DNAJC5GQ8N7S2 189 aa13.89□□□□□ -0.19
LIMK1-208ENST00000538333 OR6K2Q8NGY2 324 aa13.89□□□□□ -0.19
LIMK1-208ENST00000538333 CCDC97Q96F63 343 aaPredicted RBP13.89□□□□□ -0.19
LIMK1-208ENST00000538333 PLEKHG4BQ96PX9 1271 aa13.89□□□□□ -0.19
LIMK1-208ENST00000538333 C2orf49Q9BVC5 232 aaPredicted RBP13.89□□□□□ -0.19
LIMK1-208ENST00000538333 LRRC3Q9BY71 257 aa13.89□□□□□ -0.19
LIMK1-208ENST00000538333 SPAG4Q9NPE6 437 aa13.89□□□□□ -0.19
LIMK1-208ENST00000538333 MRPL40Q9NQ50 206 aaKnown RBP13.89□□□□□ -0.19
LIMK1-208ENST00000538333 SDR39U1Q9NRG7 319 aaPredicted RBP13.89□□□□□ -0.19
LIMK1-208ENST00000538333 TMEM39AQ9NV64 488 aa13.89□□□□□ -0.19
LIMK1-208ENST00000538333 DLGAP2Q9P1A6 1054 aa13.89□□□□□ -0.19
LIMK1-208ENST00000538333 TMEM181Q9P2C4 612 aa13.89□□□□□ -0.19
LIMK1-208ENST00000538333 CLEC4EQ9ULY5 219 aa13.89□□□□□ -0.19
LIMK1-208ENST00000538333 BTRCQ9Y297 605 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms