RNA–Protein interactions for RNA: ENST00000537230.2

TRIM25-202, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 2,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-202ENST00000537230 NPAS4Q8IUM7 802 aa12.79□□□□□ -0.36
TRIM25-202ENST00000537230 FAM126BQ8IXS8 530 aa12.79□□□□□ -0.36
TRIM25-202ENST00000537230 LPCAT1Q8NF37 534 aa12.79□□□□□ -0.36
TRIM25-202ENST00000537230 FAM110BQ8TC76 370 aa12.79□□□□□ -0.36
TRIM25-202ENST00000537230 BHMTQ93088 406 aa12.79□□□□□ -0.36
TRIM25-202ENST00000537230 ESAMQ96AP7 390 aa12.79□□□□□ -0.36
TRIM25-202ENST00000537230 SLCO4A1Q96BD0 722 aa12.79□□□□□ -0.36
TRIM25-202ENST00000537230 ZNF597Q96LX8 424 aa12.79□□□□□ -0.36
TRIM25-202ENST00000537230 TDRD1Q9BXT4 1180 aaKnown RBP12.79□□□□□ -0.36
TRIM25-202ENST00000537230 SMPD4Q9NXE4 827 aa12.79□□□□□ -0.36
TRIM25-202ENST00000537230 SEPT3Q9UH03 358 aa12.79□□□□□ -0.36
TRIM25-202ENST00000537230 UNC80Q8N2C7 3258 aa12.79□□□□□ -0.36
TRIM25-202ENST00000537230 PIP5K1BO14986 540 aa12.79□□□□□ -0.36
TRIM25-202ENST00000537230 INSIG1O15503 277 aa12.79□□□□□ -0.36
TRIM25-202ENST00000537230 H6PDO95479 791 aa12.79□□□□□ -0.36
TRIM25-202ENST00000537230 COL6A1P12109 1028 aa12.79□□□□□ -0.36
TRIM25-202ENST00000537230 PRDX3P30048 256 aaKnown RBP12.79□□□□□ -0.36
TRIM25-202ENST00000537230 CCL23P55773 120 aa12.79□□□□□ -0.36
TRIM25-202ENST00000537230 NFKB2Q00653 900 aa12.79□□□□□ -0.36
TRIM25-202ENST00000537230 SQLEQ14534 574 aa12.79□□□□□ -0.36
TRIM25-202ENST00000537230 KRT80Q6KB66 452 aa12.79□□□□□ -0.36
TRIM25-202ENST00000537230 HERC6Q8IVU3 1022 aa12.79□□□□□ -0.36
TRIM25-202ENST00000537230 TTC16Q8NEE8 873 aa12.79□□□□□ -0.36
TRIM25-202ENST00000537230 HSPBAP1Q96EW2 488 aa12.79□□□□□ -0.36
TRIM25-202ENST00000537230 CCDC97Q96F63 343 aaPredicted RBP12.79□□□□□ -0.36
TRIM25-202ENST00000537230 GPR21Q99679 349 aa12.79□□□□□ -0.36
TRIM25-202ENST00000537230 NOL11Q9H8H0 719 aaKnown RBP12.79□□□□□ -0.36
TRIM25-202ENST00000537230 OLAHQ9NV23 265 aa12.79□□□□□ -0.36
TRIM25-202ENST00000537230 NLE1Q9NVX2 485 aaPredicted RBP12.79□□□□□ -0.36
TRIM25-202ENST00000537230 BTRCQ9Y297 605 aa12.79□□□□□ -0.36
TRIM25-202ENST00000537230 KDELR3O43731 214 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 CLASP2O75122 1294 aaKnown RBP12.78□□□□□ -0.36
TRIM25-202ENST00000537230 RHOBTB1O94844 696 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 PRAMEF12O95522 483 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 GFAPP14136 432 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 SLC11A2P49281 568 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 AGTR2P50052 363 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 CDH4P55283 916 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 TXNL4AP83876 142 aaKnown RBP12.78□□□□□ -0.36
TRIM25-202ENST00000537230 RHDQ02161 417 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 GEN1Q17RS7 908 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 LPCAT2Q7L5N7 544 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 TMCO2Q7Z6W1 182 aaPredicted RBP12.78□□□□□ -0.36
TRIM25-202ENST00000537230 RETREG3Q86VR2 466 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 CARM1Q86X55 608 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 EFHBQ8N7U6 833 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 RIN3Q8TB24 985 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 FAR2Q96K12 515 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 ZNF599Q96NL3 588 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 BIRC8Q96P09 236 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 TSEN34Q9BSV6 310 aaKnown RBP12.78□□□□□ -0.36
TRIM25-202ENST00000537230 SEMA4BQ9NPR2 832 aaPredicted RBP12.78□□□□□ -0.36
TRIM25-202ENST00000537230 FKBPLQ9UIM3 349 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 CNOT11Q9UKZ1 510 aaKnown RBP12.78□□□□□ -0.36
TRIM25-202ENST00000537230 PADI4Q9UM07 663 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 NIPSNAP2O75323 286 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 F11P03951 625 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 ARF5P84085 180 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 BTG3Q14201 252 aaPredicted RBP12.78□□□□□ -0.36
TRIM25-202ENST00000537230 SLC8B1Q6J4K2 584 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 CXorf57Q6NSI4 855 aaKnown RBP12.78□□□□□ -0.36
TRIM25-202ENST00000537230 DUS1LQ6P1R4 473 aaKnown RBP12.78□□□□□ -0.36
TRIM25-202ENST00000537230 DCBLD1Q8N8Z6 715 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 SNRNP27Q8WVK2 155 aaKnown RBP12.78□□□□□ -0.36
TRIM25-202ENST00000537230 PPWD1Q96BP3 646 aaKnown RBP12.78□□□□□ -0.36
TRIM25-202ENST00000537230 SLC22A12Q96S37 553 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 HAUS8Q9BT25 410 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 TRMOQ9BU70 441 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 TRIM8Q9BZR9 551 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 HMX1Q9NP08 348 aaPredicted RBP12.78□□□□□ -0.36
TRIM25-202ENST00000537230 THEGQ9P2T0 379 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 AGO1Q9UL18 857 aaKnown RBP12.78□□□□□ -0.36
TRIM25-202ENST00000537230 ASB1Q9Y576 335 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 DOCK6Q96HP0 2047 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 PQBP1O60828 265 aaKnown RBP12.78□□□□□ -0.36
TRIM25-202ENST00000537230 SRP72O76094 671 aaKnown RBP12.78□□□□□ -0.36
TRIM25-202ENST00000537230 C8BP07358 591 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 RHOCP08134 193 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 SNRPB2P08579 225 aaKnown RBP12.78□□□□□ -0.36
TRIM25-202ENST00000537230 LINC00032P0C843 101 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 CHRM3P20309 590 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 OGNP20774 298 aaKnown RBP12.78□□□□□ -0.36
TRIM25-202ENST00000537230 STT3AP46977 705 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 KPNA1P52294 538 aaPredicted RBP12.78□□□□□ -0.36
TRIM25-202ENST00000537230 PTPRNQ16849 979 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 HECTD3Q5T447 861 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 RNF219Q5W0B1 726 aaPredicted RBP12.78□□□□□ -0.36
TRIM25-202ENST00000537230 HMBOX1Q6NT76 420 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.78□□□□□ -0.362e-7■■■■■ 115.1
TRIM25-202ENST00000537230 TWIST2Q8WVJ9 160 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 PEX13Q92968 403 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 CLSTN3Q9BQT9 956 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 OSBPL11Q9BXB4 747 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 IL1RL2Q9HB29 575 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 SCUBE2Q9NQ36 999 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 SUCOQ9UBS9 1254 aaKnown RBP12.78□□□□□ -0.36
TRIM25-202ENST00000537230 CIDEBQ9UHD4 219 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 BLOC1S6Q9UL45 172 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 TIMM22Q9Y584 194 aa12.78□□□□□ -0.36
TRIM25-202ENST00000537230 RAI2Q9Y5P3 530 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms