RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 TMEM178BH3BS89 294 aa4.6□□□□□ -1.67
CCDC7-208ENST00000537047 GUCY1B2O75343 617 aa4.6□□□□□ -1.67
CCDC7-208ENST00000537047 WISP2O76076 250 aa4.6□□□□□ -1.67
CCDC7-208ENST00000537047 COX7A2P14406 83 aa4.6□□□□□ -1.67
CCDC7-208ENST00000537047 MSH3P20585 1137 aa4.6□□□□□ -1.67
CCDC7-208ENST00000537047 PSMC2P35998 433 aaKnown RBP4.6□□□□□ -1.67
CCDC7-208ENST00000537047 CSRP3P50461 194 aa4.6□□□□□ -1.67
CCDC7-208ENST00000537047 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.6□□□□□ -1.67
CCDC7-208ENST00000537047 PLXDC2Q6UX71 529 aa4.6□□□□□ -1.67
CCDC7-208ENST00000537047 DPPA4Q7L190 304 aa4.6□□□□□ -1.67
CCDC7-208ENST00000537047 NKAPQ8N5F7 415 aaKnown RBP4.6□□□□□ -1.67
CCDC7-208ENST00000537047 THAP6Q8TBB0 222 aa4.6□□□□□ -1.67
CCDC7-208ENST00000537047 HERVK_113Q902F9 699 aa4.6□□□□□ -1.67
CCDC7-208ENST00000537047 PHF21AQ96BD5 680 aa4.6□□□□□ -1.67
CCDC7-208ENST00000537047 ACOX2Q99424 681 aa4.6□□□□□ -1.67
CCDC7-208ENST00000537047 TRIM15Q9C019 465 aa4.6□□□□□ -1.67
CCDC7-208ENST00000537047 WDR13Q9H1Z4 485 aa4.6□□□□□ -1.67
CCDC7-208ENST00000537047 ADPRHL2Q9NX46 363 aa4.6□□□□□ -1.67
CCDC7-208ENST00000537047 A0A0J9YWU9 116 aa4.59□□□□□ -1.67
CCDC7-208ENST00000537047 NDUFAF8A1L188 74 aa4.59□□□□□ -1.67
CCDC7-208ENST00000537047 TNPO2O14787 897 aaKnown RBP4.59□□□□□ -1.67
CCDC7-208ENST00000537047 ANKRD28O15084 1053 aa4.59□□□□□ -1.67
CCDC7-208ENST00000537047 HMGB1P09429 215 aaKnown RBP4.59□□□□□ -1.67
CCDC7-208ENST00000537047 CEACAM1P13688 526 aa4.59□□□□□ -1.67
CCDC7-208ENST00000537047 ITGA9Q13797 1035 aa4.59□□□□□ -1.67
CCDC7-208ENST00000537047 KRTCAP3Q53RY4 240 aa4.59□□□□□ -1.67
CCDC7-208ENST00000537047 SPINK14Q6IE38 97 aa4.59□□□□□ -1.67
CCDC7-208ENST00000537047 SH2D6Q7Z4S9 175 aa4.59□□□□□ -1.67
CCDC7-208ENST00000537047 IGSF8Q969P0 613 aa4.59□□□□□ -1.67
CCDC7-208ENST00000537047 OXNAD1Q96HP4 312 aaPredicted RBP4.59□□□□□ -1.67
CCDC7-208ENST00000537047 PCGF1Q9BSM1 259 aa4.59□□□□□ -1.67
CCDC7-208ENST00000537047 SLC6A13Q9NSD5 602 aa4.59□□□□□ -1.67
CCDC7-208ENST00000537047 DISP3Q9P2K9 1392 aa4.59□□□□□ -1.67
CCDC7-208ENST00000537047 A0A1W2PPI3 338 aa4.58□□□□□ -1.68
CCDC7-208ENST00000537047 A6NL46 340 aa4.58□□□□□ -1.68
CCDC7-208ENST00000537047 FAM90A26D6RGX4 464 aa4.58□□□□□ -1.68
CCDC7-208ENST00000537047 SLC22A2O15244 555 aa4.58□□□□□ -1.68
CCDC7-208ENST00000537047 GABRB2P47870 512 aa4.58□□□□□ -1.68
CCDC7-208ENST00000537047 KIR2DS3Q14952 304 aa4.58□□□□□ -1.68
CCDC7-208ENST00000537047 ZNF239Q16600 458 aaKnown RBP4.58□□□□□ -1.68
CCDC7-208ENST00000537047 USP41Q3LFD5 358 aa4.58□□□□□ -1.68
CCDC7-208ENST00000537047 C6orf141Q5SZD1 244 aa4.58□□□□□ -1.68
CCDC7-208ENST00000537047 ZNF440Q8IYI8 595 aa4.58□□□□□ -1.68
CCDC7-208ENST00000537047 KLHL29Q96CT2 875 aa4.58□□□□□ -1.68
CCDC7-208ENST00000537047 SMC6Q96SB8 1091 aa4.58□□□□□ -1.68
CCDC7-208ENST00000537047 TMEM47Q9BQJ4 181 aa4.58□□□□□ -1.68
CCDC7-208ENST00000537047 GPR63Q9BZJ6 419 aa4.58□□□□□ -1.68
CCDC7-208ENST00000537047 RAD21L1Q9H4I0 556 aa4.58□□□□□ -1.68
CCDC7-208ENST00000537047 SLC28A3Q9HAS3 691 aa4.58□□□□□ -1.68
CCDC7-208ENST00000537047 TMEM181Q9P2C4 612 aa4.58□□□□□ -1.68
CCDC7-208ENST00000537047 GPR52Q9Y2T5 361 aa4.58□□□□□ -1.68
CCDC7-208ENST00000537047 AAR2Q9Y312 384 aaKnown RBP4.58□□□□□ -1.68
CCDC7-208ENST00000537047 UTYO14607 1347 aa4.57□□□□□ -1.68
CCDC7-208ENST00000537047 USP17L23D6RBM5 183 aa4.57□□□□□ -1.68
CCDC7-208ENST00000537047 ARHGEF9O43307 516 aa4.57□□□□□ -1.68
CCDC7-208ENST00000537047 KCNK5O95279 499 aa4.57□□□□□ -1.68
CCDC7-208ENST00000537047 IL7RP16871 459 aa4.57□□□□□ -1.68
CCDC7-208ENST00000537047 CDAP32320 146 aa4.57□□□□□ -1.68
CCDC7-208ENST00000537047 UBA7P41226 1012 aa4.57□□□□□ -1.68
CCDC7-208ENST00000537047 GRIK2Q13002 908 aa4.57□□□□□ -1.68
CCDC7-208ENST00000537047 ACVR2BQ13705 512 aa4.57□□□□□ -1.68
CCDC7-208ENST00000537047 DRAP1Q14919 205 aaPredicted RBP4.57□□□□□ -1.68
CCDC7-208ENST00000537047 FFAR4Q5NUL3 377 aa4.57□□□□□ -1.68
CCDC7-208ENST00000537047 ANKRD52Q8NB46 1076 aa4.57□□□□□ -1.68
CCDC7-208ENST00000537047 DDHD1Q8NEL9 900 aa4.57□□□□□ -1.68
CCDC7-208ENST00000537047 NOC3LQ8WTT2 800 aaKnown RBP4.57□□□□□ -1.68
CCDC7-208ENST00000537047 KIF1BPQ96EK5 621 aa4.57□□□□□ -1.68
CCDC7-208ENST00000537047 FUZQ9BT04 418 aa4.57□□□□□ -1.68
CCDC7-208ENST00000537047 USP44Q9H0E7 712 aa4.57□□□□□ -1.68
CCDC7-208ENST00000537047 PTTG2Q9NZH5 202 aa4.57□□□□□ -1.68
CCDC7-208ENST00000537047 DNAJB4Q9UDY4 337 aa4.57□□□□□ -1.68
CCDC7-208ENST00000537047 A0A1W2PQM1 296 aa4.56□□□□□ -1.68
CCDC7-208ENST00000537047 SH2B2O14492 632 aaPredicted RBP4.56□□□□□ -1.68
CCDC7-208ENST00000537047 DPEP1P16444 411 aa4.56□□□□□ -1.68
CCDC7-208ENST00000537047 HOXA13P31271 388 aaPredicted RBP4.56□□□□□ -1.68
CCDC7-208ENST00000537047 LDHAL6AQ6ZMR3 332 aa4.56□□□□□ -1.68
CCDC7-208ENST00000537047 SH2D5Q6ZV89 423 aa4.56□□□□□ -1.68
CCDC7-208ENST00000537047 PLEKHM3Q6ZWE6 761 aa4.56□□□□□ -1.68
CCDC7-208ENST00000537047 CACNA2D4Q7Z3S7 1137 aa4.56□□□□□ -1.68
CCDC7-208ENST00000537047 ZNF843Q8N446 348 aa4.56□□□□□ -1.68
CCDC7-208ENST00000537047 SPATA5Q8NB90 893 aa4.56□□□□□ -1.68
CCDC7-208ENST00000537047 FAM222BQ8WU58 562 aa4.56□□□□□ -1.68
CCDC7-208ENST00000537047 CABLES2Q9BTV7 478 aa4.56□□□□□ -1.68
CCDC7-208ENST00000537047 KIF9Q9HAQ2 790 aa4.56□□□□□ -1.68
CCDC7-208ENST00000537047 FLT1P17948 1338 aa4.55□□□□□ -1.68
CCDC7-208ENST00000537047 H7C423 109 aa4.55□□□□□ -1.68
CCDC7-208ENST00000537047 M0QZ24 198 aa4.55□□□□□ -1.68
CCDC7-208ENST00000537047 PLOD2O00469 737 aa4.55□□□□□ -1.68
CCDC7-208ENST00000537047 HS3ST1O14792 307 aa4.55□□□□□ -1.68
CCDC7-208ENST00000537047 CLIC2O15247 247 aa4.55□□□□□ -1.68
CCDC7-208ENST00000537047 KCNN4O15554 427 aa4.55□□□□□ -1.68
CCDC7-208ENST00000537047 ZNF23P17027 643 aa4.55□□□□□ -1.68
CCDC7-208ENST00000537047 UGT1A1P22309 533 aa4.55□□□□□ -1.68
CCDC7-208ENST00000537047 MCCP23508 829 aa4.55□□□□□ -1.68
CCDC7-208ENST00000537047 MRPS5P82675 430 aaKnown RBP4.55□□□□□ -1.68
CCDC7-208ENST00000537047 TBX2Q13207 712 aaPredicted RBP4.55□□□□□ -1.68
CCDC7-208ENST00000537047 KIAA1644Q3SXP7 199 aa4.55□□□□□ -1.68
CCDC7-208ENST00000537047 LCE3AQ5TA76 89 aa4.55□□□□□ -1.68
CCDC7-208ENST00000537047 BHLHB9Q6PI77 547 aa4.55□□□□□ -1.68
CCDC7-208ENST00000537047 MFSD6Q6ZSS7 791 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms