RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 TRAP1Q12931 704 aaKnown RBP12.57□□□□□ -0.4
SPG11-203ENST00000535302 ZNF460Q14592 562 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 ZNF670Q9BS34 389 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 KCNN2Q9H2S1 579 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 TMEM216Q9P0N5 145 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 PCYOX1Q9UHG3 505 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 STAT5AP42229 794 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 SWI5Q1ZZU3 235 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 PPTC7Q8NI37 304 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 C15orf41Q9Y2V0 281 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 ZNF208O43345 1280 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 ACRP10323 421 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 SLC5A3P53794 718 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 TMEM63BQ5T3F8 832 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 CHST9Q7L1S5 443 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 FBXW8Q8N3Y1 598 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 FAM81AQ8TBF8 368 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 SIPA1Q96FS4 1042 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 TSSK3Q96PN8 268 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 TMEM165Q9HC07 324 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 C11orf16Q9NQ32 467 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 ADGRE2Q9UHX3 823 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 ZNF490Q9ULM2 529 aaPredicted RBP12.57□□□□□ -0.4
SPG11-203ENST00000535302 YARS2Q9Y2Z4 477 aaKnown RBP12.57□□□□□ -0.4
SPG11-203ENST00000535302 ZSCAN5BA6NJL1 495 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 ALDH4A1P30038 563 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 SLC26A3P40879 764 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 PRKCIP41743 596 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 CTSOP43234 321 aaPredicted RBP12.57□□□□□ -0.4
SPG11-203ENST00000535302 LIPMQ5VYY2 423 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 LPCAT4Q643R3 524 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 CHADLQ6NUI6 762 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 IRF2BP2Q7Z5L9 587 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 FBXL16Q8N461 479 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 DEFB119Q8N690 84 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 SPATA22Q8NHS9 363 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 S100ZQ8WXG8 99 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 EXOSC8Q96B26 276 aaKnown RBP12.57□□□□□ -0.4
SPG11-203ENST00000535302 DNAJA3Q96EY1 480 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 ZNF184Q99676 751 aaPredicted RBP12.57□□□□□ -0.4
SPG11-203ENST00000535302 TDRD1Q9BXT4 1180 aaKnown RBP12.57□□□□□ -0.4
SPG11-203ENST00000535302 LEF1Q9UJU2 399 aaPredicted RBP12.57□□□□□ -0.4
SPG11-203ENST00000535302 C3orf18Q9UK00 162 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 NR2E3Q9Y5X4 410 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 SMIM28A0A1B0GU29 152 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 RSL1D1O76021 490 aaKnown RBP12.56□□□□□ -0.4
SPG11-203ENST00000535302 C1RP00736 705 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 DNASE1L1P49184 302 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 MPP1Q00013 466 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 PDK3Q15120 406 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 RGS21Q2M5E4 152 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 VWA5B1Q5TIE3 1220 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 NLGN2Q8NFZ4 835 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 XAGE5Q8WWM1 108 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 SHC3Q92529 594 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 KLRG1Q96E93 195 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 FTHL17Q9BXU8 183 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 CHRAC1Q9NRG0 131 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 TTC24A2A3L6 582 aaPredicted RBP12.56□□□□□ -0.4
SPG11-203ENST00000535302 A8MUI8 341 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 AZIN1O14977 448 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 EPHX1P07099 455 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 AHCYP23526 432 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 GSTT1P30711 240 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 ZNF155Q12901 538 aaPredicted RBP12.56□□□□□ -0.4
SPG11-203ENST00000535302 NAE1Q13564 534 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 ZBTB6Q15916 424 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 CLEC6AQ6EIG7 209 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 PRSS55Q6UWB4 352 aaPredicted RBP12.56□□□□□ -0.4
SPG11-203ENST00000535302 OAFQ86UD1 273 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 OR14C36Q8NHC7 312 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 STARD8Q92502 1023 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 RPL10LQ96L21 214 aaKnown RBP12.56□□□□□ -0.4
SPG11-203ENST00000535302 C2CD2Q9Y426 696 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 E9PAM4 449 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 WRBO00258 174 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 SKP1P63208 163 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 B3GNT6Q6ZMB0 384 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 BRD7Q9NPI1 651 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 FBXO5Q9UKT4 447 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 FBXW2Q9UKT8 454 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 PADI3Q9ULW8 664 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 RIMBP3CA6NJZ7 1639 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 RIMBP3BA6NNM3 1639 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 RIMBP3Q9UFD9 1639 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 OTCP00480 354 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 ASGR1P07306 291 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 PTNP21246 168 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 UGT1A5P35504 534 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 ACLYP53396 1101 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 TXNL4AP83876 142 aaKnown RBP12.56□□□□□ -0.4
SPG11-203ENST00000535302 FOXM1Q08050 763 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 DCTN2Q13561 401 aaKnown RBP12.56□□□□□ -0.4
SPG11-203ENST00000535302 MYBPC3Q14896 1274 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 ZACNQ401N2 412 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 ZFP1Q6P2D0 407 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 ALG3Q92685 438 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 HSD17B14Q9BPX1 270 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 TBC1D10AQ9BXI6 508 aa12.56□□□□□ -0.4
SPG11-203ENST00000535302 ZNF132P52740 706 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms