RNA–Protein interactions for RNA: ENST00000534060.5

ARHGAP42-208, Transcript of Rho GTPase activating protein 42, human

TSL 3

Gene ARHGAP42, Length 501 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGAP42-208	ENST00000534060	HS3ST1	O14792	307 aa		2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	CAPN9	O14815	690 aa		2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	ATP2A1	O14983	1001 aa		2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	PAGE4	O60829	102 aa		2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	IGLV2-11	P01706	119 aa		2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	F7	P08709	466 aa	Predicted RBP	2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	KRT19	P08727	400 aa		2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	HLA-DOB	P13765	273 aa		2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	POLR2C	P19387	275 aa	Predicted RBP	2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	S1PR1	P21453	382 aa		2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	BDNF	P23560	247 aa		2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	DEK	P35659	375 aa	Known RBP	2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	TSPAN7	P41732	249 aa		2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	POU5F1	Q01860	360 aa	Known RBP	2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	ARL16	Q0P5N6	197 aa		2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	MAD2L1	Q13257	205 aa	Predicted RBP	2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	OLIG2	Q13516	323 aa		2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	ZRSR1	Q15695	479 aa	Known RBP	2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	DCST1	Q5T197	706 aa		2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	WBP2NL	Q6ICG8	309 aa		2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	ADAM5	Q6NVV9	412 aa		2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	FAM171B	Q6P995	826 aa		2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	GFRAL	Q6UXV0	394 aa		2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	MEX3B	Q6ZN04	569 aa	Known RBP	2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	CLEC17A	Q6ZS10	378 aa		2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	KCTD8	Q6ZWB6	473 aa		2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	IKBIP	Q70UQ0	350 aa		2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	DSG4	Q86SJ6	1040 aa		2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	CCDC190	Q86UF4	302 aa		2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	CHERP	Q8IWX8	916 aa	Known RBP	2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	BEST3	Q8N1M1	668 aa		2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	DBF4B	Q8NFT6	615 aa		2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	DMBX1	Q8NFW5	382 aa		2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	RFFL	Q8WZ73	363 aa		2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	FAM149B1	Q96BN6	582 aa		2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	FEM1C	Q96JP0	617 aa		2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	GAD1	Q99259	594 aa		2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	SEMA3C	Q99985	751 aa		2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	POLR3C	Q9BUI4	534 aa	Predicted RBP	2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	LRMDA	Q9H2I8	198 aa		2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	UPF2	Q9HAU5	1272 aa	Known RBP	2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	SDF2L1	Q9HCN8	221 aa		2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	DIAPH3	Q9NSV4	1193 aa		2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	PTTG2	Q9NZH5	202 aa		2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	ABI3	Q9P2A4	366 aa		2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	FBXL2	Q9UKC9	423 aa		2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	PADI3	Q9ULW8	664 aa		2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	B3GALT5	Q9Y2C3	310 aa		2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	ADAM18	Q9Y3Q7	739 aa		2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	CLIC4	Q9Y696	253 aa		2.58	□□□□□ -2
ARHGAP42-208	ENST00000534060	TAF1	P21675	1872 aa		2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	EIF4E1B	A6NMX2	242 aa	Known RBP	2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	AP3D1	O14617	1153 aa		2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	WDHD1	O75717	1129 aa	Predicted RBP	2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	EIF2S1	P05198	315 aa	Known RBP	2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	CLEC3B	P05452	202 aa		2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	CLTB	P09497	229 aa		2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	NR2F2	P24468	414 aa		2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	MAN1A1	P33908	653 aa		2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	BSG	P35613	385 aa		2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	ARL3	P36405	182 aa		2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	PRCP	P42785	496 aa		2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	PPP2R2B	Q00005	443 aa		2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	CSTF3	Q12996	717 aa	Known RBP	2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	GRIK2	Q13002	908 aa		2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	DDX10	Q13206	875 aa	Known RBP	2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	GTF2H2	Q13888	395 aa		2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	PDE1C	Q14123	709 aa	Predicted RBP	2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	RBBP5	Q15291	538 aa	Known RBP	2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	PNLIPRP3	Q17RR3	467 aa		2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	TMEM35A	Q53FP2	167 aa		2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	TMEM198	Q66K66	360 aa		2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	GTF2H2C	Q6P1K8	395 aa		2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	TMTC3	Q6ZXV5	915 aa		2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	ZNF771	Q7L3S4	317 aa	Predicted RBP	2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	KMT5C	Q86Y97	462 aa		2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	TEX11	Q8IYF3	940 aa		2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	ADSSL1	Q8N142	457 aa		2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	NAGS	Q8N159	534 aa		2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	LMNTD1	Q8N9Z9	388 aa		2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	ANKRD52	Q8NB46	1076 aa		2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	OR5R1	Q8NH85	324 aa		2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	GSDMB	Q8TAX9	411 aa		2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	HM13	Q8TCT9	377 aa		2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	UTP15	Q8TED0	518 aa	Known RBP	2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	HDAC2	Q92769	488 aa	Known RBP	2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	ARHGEF26	Q96DR7	871 aa		2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	TRIM44	Q96DX7	344 aa	Predicted RBP	2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	ELMOD3	Q96FG2	381 aa		2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	OXNAD1	Q96HP4	312 aa	Predicted RBP	2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	PPP1R13B	Q96KQ4	1090 aa		2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	C1orf74	Q96LT6	269 aa		2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	CMTM3	Q96MX0	182 aa		2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	QRFPR	Q96P65	431 aa		2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	SH3GL2	Q99962	352 aa		2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	SH2D4A	Q9H788	454 aa		2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	EIF2B3	Q9NR50	452 aa	Known RBP	2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	ABCF3	Q9NUQ8	709 aa		2.57	□□□□□ -2
ARHGAP42-208	ENST00000534060	SEPT11	Q9NVA2	429 aa	Known RBP	2.57	□□□□□ -2

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