RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 GAS2L3Q86XJ1 694 aa10.34□□□□□ -0.75
CAPN1-225ENST00000533704 RAVER1Q8IY67 606 aaKnown RBP10.34□□□□□ -0.75
CAPN1-225ENST00000533704 ZNF567Q8N184 647 aa10.34□□□□□ -0.75
CAPN1-225ENST00000533704 GPR26Q8NDV2 337 aa10.34□□□□□ -0.75
CAPN1-225ENST00000533704 SLC37A2Q8TED4 501 aa10.34□□□□□ -0.75
CAPN1-225ENST00000533704 HTR3CQ8WXA8 447 aa10.34□□□□□ -0.75
CAPN1-225ENST00000533704 EID2BQ96D98 161 aa10.34□□□□□ -0.75
CAPN1-225ENST00000533704 QKIQ96PU8 341 aaKnown RBP eCLIP10.34□□□□□ -0.75
CAPN1-225ENST00000533704 FAM118BQ9BPY3 351 aa10.34□□□□□ -0.75
CAPN1-225ENST00000533704 NUDT22Q9BRQ3 303 aa10.34□□□□□ -0.75
CAPN1-225ENST00000533704 ZSCAN5AQ9BUG6 496 aa10.34□□□□□ -0.75
CAPN1-225ENST00000533704 SEMA6CQ9H3T2 930 aa10.34□□□□□ -0.75
CAPN1-225ENST00000533704 OSGEPL1Q9H4B0 414 aa10.34□□□□□ -0.75
CAPN1-225ENST00000533704 PRORYQ9H606 182 aa10.34□□□□□ -0.75
CAPN1-225ENST00000533704 RAD18Q9NS91 495 aa10.34□□□□□ -0.75
CAPN1-225ENST00000533704 KCNK4Q9NYG8 393 aa10.34□□□□□ -0.75
CAPN1-225ENST00000533704 VPS18Q9P253 973 aa10.34□□□□□ -0.75
CAPN1-225ENST00000533704 ATXN10Q9UBB4 475 aa10.34□□□□□ -0.75
CAPN1-225ENST00000533704 RSPH14Q9UHP6 348 aa10.34□□□□□ -0.75
CAPN1-225ENST00000533704 REXO2Q9Y3B8 237 aaKnown RBP10.34□□□□□ -0.75
CAPN1-225ENST00000533704 ZFHX4Q86UP3 3567 aa10.34□□□□□ -0.75
CAPN1-225ENST00000533704 FASNP49327 2511 aaKnown RBP10.33□□□□□ -0.76
CAPN1-225ENST00000533704 CDRT15L2A8MXV6 281 aa10.33□□□□□ -0.76
CAPN1-225ENST00000533704 HACD1B0YJ81 288 aa10.33□□□□□ -0.76
CAPN1-225ENST00000533704 BUD23O43709 281 aaKnown RBP10.33□□□□□ -0.76
CAPN1-225ENST00000533704 MTX2O75431 263 aa10.33□□□□□ -0.76
CAPN1-225ENST00000533704 PTMAP06454 111 aaKnown RBP10.33□□□□□ -0.76
CAPN1-225ENST00000533704 ZNF8P17098 575 aaPredicted RBP10.33□□□□□ -0.76
CAPN1-225ENST00000533704 BPIP17213 487 aa10.33□□□□□ -0.76
CAPN1-225ENST00000533704 RBL1P28749 1068 aa10.33□□□□□ -0.76
CAPN1-225ENST00000533704 SLC5A2P31639 672 aa10.33□□□□□ -0.76
CAPN1-225ENST00000533704 CTNNA1P35221 906 aaKnown RBP10.33□□□□□ -0.76
CAPN1-225ENST00000533704 ETV5P41161 510 aa10.33□□□□□ -0.76
CAPN1-225ENST00000533704 MLLT3P42568 568 aaPredicted RBP10.33□□□□□ -0.76
CAPN1-225ENST00000533704 MAPK9P45984 424 aa10.33□□□□□ -0.76
CAPN1-225ENST00000533704 OTUD4Q01804 1114 aaKnown RBP10.33□□□□□ -0.76
CAPN1-225ENST00000533704 NFATC2Q13469 925 aa10.33□□□□□ -0.76
CAPN1-225ENST00000533704 C16orf72Q14CZ0 275 aa10.33□□□□□ -0.76
CAPN1-225ENST00000533704 SLC14A2Q15849 920 aa10.33□□□□□ -0.76
CAPN1-225ENST00000533704 PPP2R5EQ16537 467 aa10.33□□□□□ -0.76
CAPN1-225ENST00000533704 SIRPB2Q5JXA9 342 aa10.33□□□□□ -0.76
CAPN1-225ENST00000533704 SNAP47Q5SQN1 464 aa10.33□□□□□ -0.76
CAPN1-225ENST00000533704 KDELC1Q6UW63 502 aa10.33□□□□□ -0.76
CAPN1-225ENST00000533704 BBS12Q6ZW61 710 aa10.33□□□□□ -0.76
CAPN1-225ENST00000533704 GPR155Q7Z3F1 870 aa10.33□□□□□ -0.76
CAPN1-225ENST00000533704 ZNF438Q7Z4V0 828 aa10.33□□□□□ -0.76
CAPN1-225ENST00000533704 CLEC14AQ86T13 490 aa10.33□□□□□ -0.76
CAPN1-225ENST00000533704 SLITRK4Q8IW52 837 aa10.33□□□□□ -0.76
CAPN1-225ENST00000533704 TRAM1L1Q8N609 369 aa10.33□□□□□ -0.76
CAPN1-225ENST00000533704 SPC24Q8NBT2 197 aa10.33□□□□□ -0.76
CAPN1-225ENST00000533704 RCBTB1Q8NDN9 531 aa10.33□□□□□ -0.76
CAPN1-225ENST00000533704 GDAP1Q8TB36 358 aa10.33□□□□□ -0.76
CAPN1-225ENST00000533704 BLOC1S5Q8TDH9 187 aa10.33□□□□□ -0.76
CAPN1-225ENST00000533704 GLYATL1Q969I3 302 aa10.33□□□□□ -0.76
CAPN1-225ENST00000533704 TADA1Q96BN2 335 aa10.33□□□□□ -0.76
CAPN1-225ENST00000533704 CCDC97Q96F63 343 aaPredicted RBP10.33□□□□□ -0.76
CAPN1-225ENST00000533704 AHCYL2Q96HN2 611 aaKnown RBP10.33□□□□□ -0.76
CAPN1-225ENST00000533704 OXNAD1Q96HP4 312 aaPredicted RBP10.33□□□□□ -0.76
CAPN1-225ENST00000533704 CCDC74BQ96LY2 380 aa10.33□□□□□ -0.76
CAPN1-225ENST00000533704 BBC3Q96PG8 261 aaPredicted RBP10.33□□□□□ -0.76
CAPN1-225ENST00000533704 SLC38A3Q99624 504 aa10.33□□□□□ -0.76
CAPN1-225ENST00000533704 CMKLR1Q99788 373 aa10.33□□□□□ -0.76
CAPN1-225ENST00000533704 BAG1Q99933 345 aaPredicted RBP10.33□□□□□ -0.76
CAPN1-225ENST00000533704 HERPUD2Q9BSE4 406 aa10.33□□□□□ -0.76
CAPN1-225ENST00000533704 LACRTQ9GZZ8 138 aa10.33□□□□□ -0.76
CAPN1-225ENST00000533704 CARD9Q9H257 536 aa10.33□□□□□ -0.76
CAPN1-225ENST00000533704 STN1Q9H668 368 aaKnown RBP10.33□□□□□ -0.76
CAPN1-225ENST00000533704 RMI1Q9H9A7 625 aa10.33□□□□□ -0.76
CAPN1-225ENST00000533704 AKAP7Q9P0M2 348 aaPredicted RBP10.33□□□□□ -0.76
CAPN1-225ENST00000533704 TBC1D29Q9UFV1 150 aa10.33□□□□□ -0.76
CAPN1-225ENST00000533704 PCDHA3Q9Y5H8 950 aa10.33□□□□□ -0.76
CAPN1-225ENST00000533704 SDK2Q58EX2 2172 aa10.33□□□□□ -0.76
CAPN1-225ENST00000533704 ZNF106Q9H2Y7 1883 aaKnown RBP10.32□□□□□ -0.76
CAPN1-225ENST00000533704 IGHV1OR21-1A0A087WYE8 117 aa10.32□□□□□ -0.76
CAPN1-225ENST00000533704 APOC4-APOC2K7ER74 178 aa10.32□□□□□ -0.76
CAPN1-225ENST00000533704 NUAK1O60285 661 aa10.32□□□□□ -0.76
CAPN1-225ENST00000533704 APOC2P02655 101 aa10.32□□□□□ -0.76
CAPN1-225ENST00000533704 CD1CP29017 333 aa10.32□□□□□ -0.76
CAPN1-225ENST00000533704 CETN2P41208 172 aa10.32□□□□□ -0.76
CAPN1-225ENST00000533704 GPR3P46089 330 aa10.32□□□□□ -0.76
CAPN1-225ENST00000533704 VAV2P52735 878 aa10.32□□□□□ -0.76
CAPN1-225ENST00000533704 UCNP55089 124 aa10.32□□□□□ -0.76
CAPN1-225ENST00000533704 RWDD2BP57060 319 aa10.32□□□□□ -0.76
CAPN1-225ENST00000533704 DCDC1P59894 354 aa10.32□□□□□ -0.76
CAPN1-225ENST00000533704 EIF3EP60228 445 aaKnown RBP10.32□□□□□ -0.76
CAPN1-225ENST00000533704 HHEXQ03014 270 aa10.32□□□□□ -0.76
CAPN1-225ENST00000533704 ZFP36L1Q07352 338 aaKnown RBP10.32□□□□□ -0.76
CAPN1-225ENST00000533704 SEPT7Q16181 437 aaKnown RBP10.32□□□□□ -0.76
CAPN1-225ENST00000533704 INSCQ1MX18 579 aa10.32□□□□□ -0.76
CAPN1-225ENST00000533704 AADACL2Q6P093 401 aa10.32□□□□□ -0.76
CAPN1-225ENST00000533704 DARS2Q6PI48 645 aaKnown RBP10.32□□□□□ -0.76
CAPN1-225ENST00000533704 ADGRG6Q86SQ4 1221 aa10.32□□□□□ -0.76
CAPN1-225ENST00000533704 PHYKPLQ8IUZ5 450 aa10.32□□□□□ -0.76
CAPN1-225ENST00000533704 CDKL3Q8IVW4 592 aaPredicted RBP10.32□□□□□ -0.76
CAPN1-225ENST00000533704 SFRP1Q8N474 314 aa10.32□□□□□ -0.76
CAPN1-225ENST00000533704 ACTL9Q8TC94 416 aa10.32□□□□□ -0.76
CAPN1-225ENST00000533704 USP7Q93009 1102 aa10.32□□□□□ -0.76
CAPN1-225ENST00000533704 MRGPRX2Q96LB1 330 aa10.32□□□□□ -0.76
CAPN1-225ENST00000533704 FCRL5Q96RD9 977 aa10.32□□□□□ -0.76
CAPN1-225ENST00000533704 UBL7Q96S82 380 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms