RNA–Protein interactions for RNA: ENST00000528062.7

RBM39-243, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best) BASIC

Gene RBM39, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-243ENST00000528062 LRG1P02750 347 aa12.96□□□□□ -0.33
RBM39-243ENST00000528062 ALDOCP09972 364 aaKnown RBP12.96□□□□□ -0.33
RBM39-243ENST00000528062 EPHB3P54753 998 aa12.96□□□□□ -0.33
RBM39-243ENST00000528062 YBX1P67809 324 aaKnown RBP12.96□□□□□ -0.33
RBM39-243ENST00000528062 ZNF33AQ06730 810 aa12.96□□□□□ -0.33
RBM39-243ENST00000528062 MYBPC3Q14896 1274 aa12.96□□□□□ -0.33
RBM39-243ENST00000528062 MAPRE2Q15555 327 aa12.96□□□□□ -0.33
RBM39-243ENST00000528062 FAM83EQ2M2I3 478 aa12.96□□□□□ -0.33
RBM39-243ENST00000528062 NHSL2Q5HYW2 709 aa12.96□□□□□ -0.33
RBM39-243ENST00000528062 ANKRD54Q6NXT1 300 aa12.96□□□□□ -0.33
RBM39-243ENST00000528062 TMEM207Q6UWW9 146 aa12.96□□□□□ -0.33
RBM39-243ENST00000528062 GAREM2Q75VX8 874 aa12.96□□□□□ -0.33
RBM39-243ENST00000528062 SCML4Q8N228 414 aa12.96□□□□□ -0.33
RBM39-243ENST00000528062 TRIML2Q8N7C3 387 aa12.96□□□□□ -0.33
RBM39-243ENST00000528062 CANT1Q8WVQ1 401 aa12.96□□□□□ -0.33
RBM39-243ENST00000528062 CASP10Q92851 521 aa12.96□□□□□ -0.33
RBM39-243ENST00000528062 FAR2Q96K12 515 aa12.96□□□□□ -0.33
RBM39-243ENST00000528062 APOL5Q9BWW9 433 aa12.96□□□□□ -0.33
RBM39-243ENST00000528062 PRKD2Q9BZL6 878 aa12.96□□□□□ -0.33
RBM39-243ENST00000528062 MRM3Q9HC36 420 aaKnown RBP12.96□□□□□ -0.33
RBM39-243ENST00000528062 RRN3Q9NYV6 651 aa12.96□□□□□ -0.33
RBM39-243ENST00000528062 RSL24D1Q9UHA3 163 aaKnown RBP12.96□□□□□ -0.33
RBM39-243ENST00000528062 SFMBT1Q9UHJ3 866 aa12.96□□□□□ -0.33
RBM39-243ENST00000528062 MATN3O15232 486 aa12.96□□□□□ -0.34
RBM39-243ENST00000528062 MOSPD3O75425 235 aa12.96□□□□□ -0.34
RBM39-243ENST00000528062 ZDHHC11BP0C7U3 371 aa12.96□□□□□ -0.34
RBM39-243ENST00000528062 ZNF135P52742 658 aaPredicted RBP12.96□□□□□ -0.34
RBM39-243ENST00000528062 ADRM1Q16186 407 aa12.96□□□□□ -0.34
RBM39-243ENST00000528062 PCSK7Q16549 785 aa12.96□□□□□ -0.34
RBM39-243ENST00000528062 LARP4Q71RC2 724 aaKnown RBP eCLIP12.96□□□□□ -0.34
RBM39-243ENST00000528062 RTL10Q7L3V2 364 aa12.96□□□□□ -0.34
RBM39-243ENST00000528062 PTCD2Q8WV60 388 aaKnown RBP12.96□□□□□ -0.34
RBM39-243ENST00000528062 FSD1LQ9BXM9 530 aa12.96□□□□□ -0.34
RBM39-243ENST00000528062 SFXN1Q9H9B4 322 aa12.96□□□□□ -0.34
RBM39-243ENST00000528062 TIMMDC1Q9NPL8 285 aa12.96□□□□□ -0.34
RBM39-243ENST00000528062 RBM22Q9NW64 420 aaKnown RBP eCLIP12.96□□□□□ -0.343e-7■■■■■ 39
RBM39-243ENST00000528062 CROTQ9UKG9 612 aa12.96□□□□□ -0.34
RBM39-243ENST00000528062 TRAF6Q9Y4K3 522 aa12.96□□□□□ -0.34
RBM39-243ENST00000528062 A0A0J9YVX5 310 aa12.95□□□□□ -0.34
RBM39-243ENST00000528062 CCL22O00626 93 aa12.95□□□□□ -0.34
RBM39-243ENST00000528062 GPC4O75487 556 aa12.95□□□□□ -0.34
RBM39-243ENST00000528062 F11P03951 625 aa12.95□□□□□ -0.34
RBM39-243ENST00000528062 HNRNPA1P09651 372 aaKnown RBP eCLIP12.95□□□□□ -0.341e-12■■■□□ 14.6
RBM39-243ENST00000528062 LTA4HP09960 611 aaKnown RBP12.95□□□□□ -0.34
RBM39-243ENST00000528062 UGT1A6P19224 532 aa12.95□□□□□ -0.34
RBM39-243ENST00000528062 KPNA2P52292 529 aaKnown RBP12.95□□□□□ -0.34
RBM39-243ENST00000528062 EPHA5P54756 1037 aa12.95□□□□□ -0.34
RBM39-243ENST00000528062 GEMP55040 296 aa12.95□□□□□ -0.34
RBM39-243ENST00000528062 PRKCQQ04759 706 aa12.95□□□□□ -0.34
RBM39-243ENST00000528062 EIF4EBP2Q13542 120 aaPredicted RBP12.95□□□□□ -0.34
RBM39-243ENST00000528062 SAMD4BQ5PRF9 694 aaKnown RBP12.95□□□□□ -0.34
RBM39-243ENST00000528062 FAM45BPQ6NSW5 357 aa12.95□□□□□ -0.34
RBM39-243ENST00000528062 LDB1Q86U70 411 aaPredicted RBP12.95□□□□□ -0.34
RBM39-243ENST00000528062 CCDC117Q8IWD4 279 aaPredicted RBP12.95□□□□□ -0.34
RBM39-243ENST00000528062 FAM45AQ8TCE6 357 aa12.95□□□□□ -0.34
RBM39-243ENST00000528062 TCEAL4Q96EI5 215 aa12.95□□□□□ -0.34
RBM39-243ENST00000528062 MSLNLQ96KJ4 702 aa12.95□□□□□ -0.34
RBM39-243ENST00000528062 UBXN10Q96LJ8 280 aa12.95□□□□□ -0.34
RBM39-243ENST00000528062 HAUS8Q9BT25 410 aa12.95□□□□□ -0.34
RBM39-243ENST00000528062 SLC25A23Q9BV35 468 aa12.95□□□□□ -0.34
RBM39-243ENST00000528062 ANKRD60Q9BZ19 345 aa12.95□□□□□ -0.34
RBM39-243ENST00000528062 S1PR5Q9H228 398 aa12.95□□□□□ -0.34
RBM39-243ENST00000528062 EML4Q9HC35 981 aaKnown RBP12.95□□□□□ -0.34
RBM39-243ENST00000528062 MRPL40Q9NQ50 206 aaKnown RBP12.95□□□□□ -0.34
RBM39-243ENST00000528062 PNPLA3Q9NST1 481 aa12.95□□□□□ -0.34
RBM39-243ENST00000528062 CLDND1Q9NY35 253 aa12.95□□□□□ -0.34
RBM39-243ENST00000528062 GIMAP2Q9UG22 337 aa12.95□□□□□ -0.34
RBM39-243ENST00000528062 MYRFQ9Y2G1 1151 aa12.95□□□□□ -0.34
RBM39-243ENST00000528062 PTGDR2Q9Y5Y4 395 aa12.95□□□□□ -0.34
RBM39-243ENST00000528062 A0A1W2PQH9 124 aa12.94□□□□□ -0.34
RBM39-243ENST00000528062 DLGAP1O14490 977 aa12.94□□□□□ -0.34
RBM39-243ENST00000528062 MSI1O43347 362 aaKnown RBP12.94□□□□□ -0.34
RBM39-243ENST00000528062 SRP72O76094 671 aaKnown RBP12.94□□□□□ -0.34
RBM39-243ENST00000528062 IGLV3-25P01717 112 aa12.94□□□□□ -0.34
RBM39-243ENST00000528062 POU2F2P09086 479 aa12.94□□□□□ -0.34
RBM39-243ENST00000528062 GNAO1P09471 354 aa12.94□□□□□ -0.34
RBM39-243ENST00000528062 GJA1P17302 382 aa12.94□□□□□ -0.34
RBM39-243ENST00000528062 GRIA3P42263 894 aa12.94□□□□□ -0.34
RBM39-243ENST00000528062 CDK9P50750 372 aaKnown RBP12.94□□□□□ -0.34
RBM39-243ENST00000528062 CDKN2DP55273 166 aa12.94□□□□□ -0.34
RBM39-243ENST00000528062 NME5P56597 212 aa12.94□□□□□ -0.34
RBM39-243ENST00000528062 VEPH1Q14D04 833 aa12.94□□□□□ -0.34
RBM39-243ENST00000528062 CCDC85BQ15834 202 aaPredicted RBP12.94□□□□□ -0.34
RBM39-243ENST00000528062 AGAP9Q5VTM2 703 aa12.94□□□□□ -0.34
RBM39-243ENST00000528062 IL31Q6EBC2 164 aa12.94□□□□□ -0.34
RBM39-243ENST00000528062 KRT80Q6KB66 452 aa12.94□□□□□ -0.34
RBM39-243ENST00000528062 KLC3Q6P597 504 aa12.94□□□□□ -0.34
RBM39-243ENST00000528062 ZBTB49Q6ZSB9 765 aa12.94□□□□□ -0.34
RBM39-243ENST00000528062 GRASPQ7Z6J2 395 aaPredicted RBP12.94□□□□□ -0.34
RBM39-243ENST00000528062 DHFR2Q86XF0 187 aa12.94□□□□□ -0.34
RBM39-243ENST00000528062 ANKFN1Q8N957 763 aa12.94□□□□□ -0.34
RBM39-243ENST00000528062 FAM47BQ8NA70 645 aa12.94□□□□□ -0.34
RBM39-243ENST00000528062 FBXO32Q969P5 355 aa12.94□□□□□ -0.34
RBM39-243ENST00000528062 PPWD1Q96BP3 646 aaKnown RBP12.94□□□□□ -0.34
RBM39-243ENST00000528062 RMND5BQ96G75 393 aaPredicted RBP12.94□□□□□ -0.34
RBM39-243ENST00000528062 CORO1BQ9BR76 489 aa12.94□□□□□ -0.34
RBM39-243ENST00000528062 FBXO44Q9H4M3 255 aa12.94□□□□□ -0.34
RBM39-243ENST00000528062 C9JVG2 144 aa12.94□□□□□ -0.34
RBM39-243ENST00000528062 PPP6CO00743 305 aa12.94□□□□□ -0.34
RBM39-243ENST00000528062 NME4O00746 187 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms