RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 CNGA3Q16281 694 aa10.46□□□□□ -0.73
CPSF1-203ENST00000527916 TMEM71Q6P5X7 295 aa10.46□□□□□ -0.73
CPSF1-203ENST00000527916 USP45Q70EL2 814 aa10.46□□□□□ -0.73
CPSF1-203ENST00000527916 MAMDC2Q7Z304 686 aaPredicted RBP10.46□□□□□ -0.73
CPSF1-203ENST00000527916 RHOT2Q8IXI1 618 aa10.46□□□□□ -0.73
CPSF1-203ENST00000527916 UNC5BQ8IZJ1 945 aa10.46□□□□□ -0.73
CPSF1-203ENST00000527916 CCL4L1Q8NHW4 92 aa10.46□□□□□ -0.73
CPSF1-203ENST00000527916 SLC35G2Q8TBE7 412 aa10.46□□□□□ -0.73
CPSF1-203ENST00000527916 CPT1CQ8TCG5 803 aa10.46□□□□□ -0.73
CPSF1-203ENST00000527916 PDCD6IPQ8WUM4 868 aaKnown RBP10.46□□□□□ -0.73
CPSF1-203ENST00000527916 HDAC11Q96DB2 347 aa10.46□□□□□ -0.73
CPSF1-203ENST00000527916 RTP4Q96DX8 246 aa10.46□□□□□ -0.73
CPSF1-203ENST00000527916 AHCYL2Q96HN2 611 aaKnown RBP10.46□□□□□ -0.73
CPSF1-203ENST00000527916 CCDC42Q96M95 316 aa10.46□□□□□ -0.73
CPSF1-203ENST00000527916 RNF157Q96PX1 679 aa10.46□□□□□ -0.73
CPSF1-203ENST00000527916 CHP1Q99653 195 aa10.46□□□□□ -0.73
CPSF1-203ENST00000527916 PACSIN1Q9BY11 444 aa10.46□□□□□ -0.73
CPSF1-203ENST00000527916 TEX101Q9BY14 249 aa10.46□□□□□ -0.73
CPSF1-203ENST00000527916 WDR26Q9H7D7 661 aa10.46□□□□□ -0.73
CPSF1-203ENST00000527916 NHEJ1Q9H9Q4 299 aaPredicted RBP10.46□□□□□ -0.73
CPSF1-203ENST00000527916 CARS2Q9HA77 564 aaKnown RBP10.46□□□□□ -0.73
CPSF1-203ENST00000527916 NT5MQ9NPB1 228 aa10.46□□□□□ -0.73
CPSF1-203ENST00000527916 RBM22Q9NW64 420 aaKnown RBP eCLIP10.46□□□□□ -0.73
CPSF1-203ENST00000527916 OCIAD1Q9NX40 245 aa10.46□□□□□ -0.73
CPSF1-203ENST00000527916 TAAR2Q9P1P5 351 aa10.46□□□□□ -0.73
CPSF1-203ENST00000527916 DNPEPQ9ULA0 475 aa10.46□□□□□ -0.73
CPSF1-203ENST00000527916 INTUQ9ULD6 942 aa10.46□□□□□ -0.73
CPSF1-203ENST00000527916 KCNMB2Q9Y691 235 aa10.46□□□□□ -0.73
CPSF1-203ENST00000527916 IGHV1OR21-1A0A087WYE8 117 aa10.45□□□□□ -0.74
CPSF1-203ENST00000527916 PRSS38A1L453 326 aa10.45□□□□□ -0.74
CPSF1-203ENST00000527916 A8MX80 341 aa10.45□□□□□ -0.74
CPSF1-203ENST00000527916 MFSD11O43934 449 aa10.45□□□□□ -0.74
CPSF1-203ENST00000527916 MFAP3LO75121 409 aa10.45□□□□□ -0.74
CPSF1-203ENST00000527916 RFPL1O75677 317 aa10.45□□□□□ -0.74
CPSF1-203ENST00000527916 STK17BO94768 372 aa10.45□□□□□ -0.74
CPSF1-203ENST00000527916 PDHA1P08559 390 aa10.45□□□□□ -0.74
CPSF1-203ENST00000527916 MYCLP1P12525 358 aaPredicted RBP10.45□□□□□ -0.74
CPSF1-203ENST00000527916 ZNF30P17039 623 aa10.45□□□□□ -0.74
CPSF1-203ENST00000527916 NR1D1P20393 614 aa10.45□□□□□ -0.74
CPSF1-203ENST00000527916 LHCGRP22888 699 aa10.45□□□□□ -0.74
CPSF1-203ENST00000527916 MPSTP25325 297 aa10.45□□□□□ -0.74
CPSF1-203ENST00000527916 ELAVL4P26378 380 aaKnown RBP10.45□□□□□ -0.74
CPSF1-203ENST00000527916 SLC1A1P43005 524 aa10.45□□□□□ -0.74
CPSF1-203ENST00000527916 RPL26P61254 145 aaKnown RBP10.45□□□□□ -0.74
CPSF1-203ENST00000527916 MC2RQ01718 297 aa10.45□□□□□ -0.74
CPSF1-203ENST00000527916 MESDQ14696 234 aa10.45□□□□□ -0.74
CPSF1-203ENST00000527916 LRRC38Q5VT99 294 aa10.45□□□□□ -0.74
CPSF1-203ENST00000527916 NKAIN2Q5VXU1 208 aa10.45□□□□□ -0.74
CPSF1-203ENST00000527916 TECPR1Q7Z6L1 1165 aa10.45□□□□□ -0.74
CPSF1-203ENST00000527916 CPNE8Q86YQ8 564 aa10.45□□□□□ -0.74
CPSF1-203ENST00000527916 ESX1Q8N693 406 aa10.45□□□□□ -0.74
CPSF1-203ENST00000527916 PQLC3Q8N755 202 aa10.45□□□□□ -0.74
CPSF1-203ENST00000527916 NUS1Q96E22 293 aa10.45□□□□□ -0.74
CPSF1-203ENST00000527916 DTD2Q96FN9 168 aa10.45□□□□□ -0.74
CPSF1-203ENST00000527916 PHF12Q96QT6 1004 aa10.45□□□□□ -0.74
CPSF1-203ENST00000527916 LGR4Q9BXB1 951 aa10.45□□□□□ -0.74
CPSF1-203ENST00000527916 SPRY4Q9C004 299 aa10.45□□□□□ -0.74
CPSF1-203ENST00000527916 PHPT1Q9NRX4 125 aaPredicted RBP10.45□□□□□ -0.74
CPSF1-203ENST00000527916 TRNAU1APQ9NX07 287 aaKnown RBP10.45□□□□□ -0.74
CPSF1-203ENST00000527916 RPL26L1Q9UNX3 145 aaKnown RBP10.45□□□□□ -0.74
CPSF1-203ENST00000527916 POLHQ9Y253 713 aa10.45□□□□□ -0.74
CPSF1-203ENST00000527916 TMEM184BQ9Y519 407 aaPredicted RBP10.45□□□□□ -0.74
CPSF1-203ENST00000527916 ITPR3Q14573 2671 aa10.44□□□□□ -0.74
CPSF1-203ENST00000527916 A0A0J9YYE9 177 aa10.44□□□□□ -0.74
CPSF1-203ENST00000527916 NPIPB15A6NHN6 443 aaPredicted RBP10.44□□□□□ -0.74
CPSF1-203ENST00000527916 INPP4BO15327 924 aa10.44□□□□□ -0.74
CPSF1-203ENST00000527916 SEMA7AO75326 666 aa10.44□□□□□ -0.74
CPSF1-203ENST00000527916 TRBC1P01850 177 aa10.44□□□□□ -0.74
CPSF1-203ENST00000527916 PYGLP06737 847 aa10.44□□□□□ -0.74
CPSF1-203ENST00000527916 CA4P22748 312 aa10.44□□□□□ -0.74
CPSF1-203ENST00000527916 TNFRSF8P28908 595 aa10.44□□□□□ -0.74
CPSF1-203ENST00000527916 CSF2RBP32927 897 aa10.44□□□□□ -0.74
CPSF1-203ENST00000527916 DCTP40126 519 aa10.44□□□□□ -0.74
CPSF1-203ENST00000527916 STAT5AP42229 794 aa10.44□□□□□ -0.74
CPSF1-203ENST00000527916 PTSQ03393 145 aa10.44□□□□□ -0.74
CPSF1-203ENST00000527916 PPIDQ08752 370 aaKnown RBP10.44□□□□□ -0.74
CPSF1-203ENST00000527916 ITKQ08881 620 aa10.44□□□□□ -0.74
CPSF1-203ENST00000527916 SLC10A2Q12908 348 aaPredicted RBP10.44□□□□□ -0.74
CPSF1-203ENST00000527916 TBX2Q13207 712 aaPredicted RBP10.44□□□□□ -0.74
CPSF1-203ENST00000527916 ATP1A1-AS1Q5TC04 95 aa10.44□□□□□ -0.74
CPSF1-203ENST00000527916 ZNF787Q6DD87 383 aa10.44□□□□□ -0.74
CPSF1-203ENST00000527916 Q6ZVL8 140 aa10.44□□□□□ -0.74
CPSF1-203ENST00000527916 ZNF765Q7L2R6 523 aa10.44□□□□□ -0.74
CPSF1-203ENST00000527916 HSD11B1LQ7Z5J1 315 aa10.44□□□□□ -0.74
CPSF1-203ENST00000527916 CNGA4Q8IV77 575 aa10.44□□□□□ -0.74
CPSF1-203ENST00000527916 PELI3Q8N2H9 469 aa10.44□□□□□ -0.74
CPSF1-203ENST00000527916 BMPERQ8N8U9 685 aa10.44□□□□□ -0.74
CPSF1-203ENST00000527916 OR10G6Q8NH81 332 aa10.44□□□□□ -0.74
CPSF1-203ENST00000527916 ARRDC2Q8TBH0 407 aa10.44□□□□□ -0.74
CPSF1-203ENST00000527916 RAPGEF5Q92565 580 aa10.44□□□□□ -0.74
CPSF1-203ENST00000527916 LYSMD1Q96S90 227 aa10.44□□□□□ -0.74
CPSF1-203ENST00000527916 CTRCQ99895 268 aa10.44□□□□□ -0.74
CPSF1-203ENST00000527916 SUDS3Q9H7L9 328 aaPredicted RBP10.44□□□□□ -0.74
CPSF1-203ENST00000527916 FBXO8Q9NRD0 319 aa10.44□□□□□ -0.74
CPSF1-203ENST00000527916 DTLQ9NZJ0 730 aa10.44□□□□□ -0.74
CPSF1-203ENST00000527916 RPS6KL1Q9Y6S9 549 aa10.44□□□□□ -0.74
CPSF1-203ENST00000527916 OTOGQ6ZRI0 2925 aa10.43□□□□□ -0.74
CPSF1-203ENST00000527916 C3orf70A6NLC5 250 aaPredicted RBP10.43□□□□□ -0.74
CPSF1-203ENST00000527916 AKR1B15C9JRZ8 316 aaPredicted RBP10.43□□□□□ -0.74
CPSF1-203ENST00000527916 K7EM74 188 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms