RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 AVL9Q8NBF6 648 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 OR52K1Q8NGK4 314 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 WDR48Q8TAF3 677 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 BAHD1Q8TBE0 780 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 ZNF398Q8TD17 642 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 DTX3LQ8TDB6 740 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 STYXQ8WUJ0 223 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 PTCD2Q8WV60 388 aaKnown RBP5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 COX14Q96I36 57 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 ZNF514Q96K75 400 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 APOLD1Q96LR9 279 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 AGAP2Q99490 1192 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 GORASP1Q9BQQ3 440 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 IL22Q9GZX6 179 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 ZMYND15Q9H091 742 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 TMEM168Q9H0V1 697 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 OR2AG1Q9H205 316 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 TCEAL2Q9H3H9 227 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 OSGEPL1Q9H4B0 414 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 ASB8Q9H765 288 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 SYNDIG1Q9H7V2 258 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 VPS37BQ9H9H4 285 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 XAB2Q9HCS7 855 aaKnown RBP5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 IL26Q9NPH9 171 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 MRPL40Q9NQ50 206 aaKnown RBP5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 NLE1Q9NVX2 485 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 SMOXQ9NWM0 555 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 SMARCAL1Q9NZC9 954 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 BFARQ9NZS9 450 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 SAMD15Q9P1V8 674 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 SIRPGQ9P1W8 387 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 KLF15Q9UIH9 416 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 ANAPC5Q9UJX4 755 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 ANGPTL2Q9UKU9 493 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 RIF1Q5UIP0 2472 aaKnown RBP5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 PTPRZ1P23471 2315 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 RALGAPA1Q6GYQ0 2036 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 SDK1Q7Z5N4 2213 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 RHPN2P1A8MT19 583 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 PDZK1P1A8MUH7 402 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 QSOX1O00391 747 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 PFDN6O15212 129 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 LDB2O43679 373 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 NUAK1O60285 661 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 SNX2O60749 519 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 KCNJ13O60928 360 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 TUBB4AP04350 444 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 GP1BAP07359 652 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 ACP5P13686 325 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 ZNF8P17098 575 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 TPH1P17752 444 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 ACP1P24666 158 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 ADRA1DP25100 572 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 MC4RP32245 332 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 HALP42357 657 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 POLD2P49005 469 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 NPY2RP49146 381 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 TERF1P54274 439 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 SESN2P58004 480 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 CTBSQ01459 385 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 DR1Q01658 176 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 CACNG1Q06432 222 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 DNAJC3Q13217 504 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 DHX34Q14147 1143 aaKnown RBP5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 PROX2Q3B8N5 592 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 C14orf28Q4W4Y0 310 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 CCDC38Q502W7 563 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 PYCR3Q53H96 274 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 DNAJC21Q5F1R6 531 aaKnown RBP5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 PCID2Q5JVF3 399 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 GPRC6AQ5T6X5 926 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 ARMC3Q5W041 872 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 DENND5AQ6IQ26 1287 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 TTC27Q6P3X3 843 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 TAS2R42Q7RTR8 314 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 EFL1Q7Z2Z2 1120 aaKnown RBP5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 SNX20Q7Z614 316 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 ADGRG6Q86SQ4 1221 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 PRUNE1Q86TP1 453 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 TRIM48Q8IWZ4 208 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 KLHL7Q8IXQ5 586 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 PPIL6Q8IXY8 311 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 GLIS1Q8NBF1 620 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 KYQ8NBH2 561 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 DDHD1Q8NEL9 900 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 OR13C4Q8NGS5 318 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 OR6P1Q8NGX9 317 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 GABPB2Q8TAK5 448 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 IFI44Q8TCB0 444 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 MAPK15Q8TD08 544 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 GPBAR1Q8TDU6 330 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 ZDHHC1Q8WTX9 485 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 ADAMTS14Q8WXS8 1223 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 ZNF592Q92610 1267 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 PEX13Q92968 403 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 EID2BQ96D98 161 aa5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 SCARF2Q96GP6 870 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 DNAJC1Q96KC8 554 aaKnown RBP5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 C16orf45Q96MC5 204 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P40-201ENST00000525121 RANBP9Q96S59 729 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms