RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 GPR1P46091 355 aa15.21■□□□□ 0.03
LSM1-203ENST00000520755 RABIFP47224 123 aa15.21■□□□□ 0.03
LSM1-203ENST00000520755 NXPH1P58417 271 aa15.21■□□□□ 0.03
LSM1-203ENST00000520755 PFN3P60673 137 aa15.21■□□□□ 0.03
LSM1-203ENST00000520755 BNC1Q01954 994 aa15.21■□□□□ 0.03
LSM1-203ENST00000520755 OVGP1Q12889 678 aa15.21■□□□□ 0.03
LSM1-203ENST00000520755 PDE1CQ14123 709 aaPredicted RBP15.21■□□□□ 0.03
LSM1-203ENST00000520755 FRG1Q14331 258 aaKnown RBP15.21■□□□□ 0.03
LSM1-203ENST00000520755 SEMA3AQ14563 771 aa15.21■□□□□ 0.03
LSM1-203ENST00000520755 EFTUD2Q15029 972 aaKnown RBP eCLIP15.21■□□□□ 0.03
LSM1-203ENST00000520755 SKIDA1Q1XH10 827 aa15.21■□□□□ 0.03
LSM1-203ENST00000520755 KIF19Q2TAC6 998 aa15.21■□□□□ 0.03
LSM1-203ENST00000520755 PNCKQ6P2M8 343 aa15.21■□□□□ 0.03
LSM1-203ENST00000520755 FBXO38Q6PIJ6 1188 aa15.21■□□□□ 0.03
LSM1-203ENST00000520755 PRR23CQ6ZRP0 262 aa15.21■□□□□ 0.03
LSM1-203ENST00000520755 TRMT10CQ7L0Y3 403 aaKnown RBP15.21■□□□□ 0.03
LSM1-203ENST00000520755 ZNF765Q7L2R6 523 aa15.21■□□□□ 0.03
LSM1-203ENST00000520755 SLC22A18ASQ8N1D0 253 aa15.21■□□□□ 0.03
LSM1-203ENST00000520755 MREGQ8N565 214 aa15.21■□□□□ 0.03
LSM1-203ENST00000520755 PNPLA1Q8N8W4 532 aa15.21■□□□□ 0.03
LSM1-203ENST00000520755 FAM174AQ8TBP5 190 aa15.21■□□□□ 0.03
LSM1-203ENST00000520755 CERS2Q96G23 380 aa15.21■□□□□ 0.03
LSM1-203ENST00000520755 FUT8Q9BYC5 575 aa15.21■□□□□ 0.03
LSM1-203ENST00000520755 RAD18Q9NS91 495 aa15.21■□□□□ 0.03
LSM1-203ENST00000520755 MOCS1Q9NZB8 636 aa15.21■□□□□ 0.03
LSM1-203ENST00000520755 MARCH4Q9P2E8 410 aaPredicted RBP15.21■□□□□ 0.03
LSM1-203ENST00000520755 TMPRSS11EQ9UL52 423 aa15.21■□□□□ 0.03
LSM1-203ENST00000520755 SNX11Q9Y5W9 270 aa15.21■□□□□ 0.03
LSM1-203ENST00000520755 TDRD6O60522 2096 aaKnown RBP15.21■□□□□ 0.03
LSM1-203ENST00000520755 GLYATL1P3A0A0U1RQE8 302 aa15.2■□□□□ 0.02
LSM1-203ENST00000520755 ARHGAP33O14559 1287 aa15.2■□□□□ 0.02
LSM1-203ENST00000520755 PIAS1O75925 651 aa15.2■□□□□ 0.02
LSM1-203ENST00000520755 VAPBO95292 243 aa15.2■□□□□ 0.02
LSM1-203ENST00000520755 PRAMEF1O95521 474 aa15.2■□□□□ 0.02
LSM1-203ENST00000520755 PLA2G5P39877 138 aa15.2■□□□□ 0.02
LSM1-203ENST00000520755 HADHAP40939 763 aa15.2■□□□□ 0.02
LSM1-203ENST00000520755 CDKN1CP49918 316 aaPredicted RBP15.2■□□□□ 0.02
LSM1-203ENST00000520755 THOP1P52888 689 aa15.2■□□□□ 0.02
LSM1-203ENST00000520755 ATXN3P54252 364 aaPredicted RBP15.2■□□□□ 0.02
LSM1-203ENST00000520755 DPTQ07507 201 aa15.2■□□□□ 0.02
LSM1-203ENST00000520755 CHRNA6Q15825 494 aa15.2■□□□□ 0.02
LSM1-203ENST00000520755 LONRF1Q17RB8 773 aa15.2■□□□□ 0.02
LSM1-203ENST00000520755 AASDHQ4L235 1098 aaPredicted RBP15.2■□□□□ 0.02
LSM1-203ENST00000520755 BEND6Q5SZJ8 279 aaPredicted RBP15.2■□□□□ 0.02
LSM1-203ENST00000520755 TPRG1LQ5T0D9 272 aa15.2■□□□□ 0.02
LSM1-203ENST00000520755 PSAPL1Q6NUJ1 521 aa15.2■□□□□ 0.02
LSM1-203ENST00000520755 AFTPHQ6ULP2 937 aa15.2■□□□□ 0.02
LSM1-203ENST00000520755 KCNMB4Q86W47 210 aa15.2■□□□□ 0.02
LSM1-203ENST00000520755 PALM2Q8IXS6 379 aa15.2■□□□□ 0.02
LSM1-203ENST00000520755 PIANPQ8IYJ0 282 aa15.2■□□□□ 0.02
LSM1-203ENST00000520755 OR2I1PQ8NGU4 316 aa15.2■□□□□ 0.02
LSM1-203ENST00000520755 CCDC97Q96F63 343 aaPredicted RBP15.2■□□□□ 0.02
LSM1-203ENST00000520755 TTC25Q96NG3 672 aa15.2■□□□□ 0.02
LSM1-203ENST00000520755 APOOQ9BUR5 198 aa15.2■□□□□ 0.02
LSM1-203ENST00000520755 SPATA16Q9BXB7 569 aa15.2■□□□□ 0.02
LSM1-203ENST00000520755 WDR26Q9H7D7 661 aa15.2■□□□□ 0.02
LSM1-203ENST00000520755 VPS37BQ9H9H4 285 aa15.2■□□□□ 0.02
LSM1-203ENST00000520755 TRBV5-4A0A0C4DH59 114 aa15.19■□□□□ 0.02
LSM1-203ENST00000520755 AGAP14A8MT82 685 aa15.19■□□□□ 0.02
LSM1-203ENST00000520755 CXorf49A8MYA2 514 aaPredicted RBP15.19■□□□□ 0.02
LSM1-203ENST00000520755 INPP4BO15327 924 aa15.19■□□□□ 0.02
LSM1-203ENST00000520755 SRP72O76094 671 aaKnown RBP15.19■□□□□ 0.02
LSM1-203ENST00000520755 ABHD2P08910 425 aa15.19■□□□□ 0.02
LSM1-203ENST00000520755 GSTA2P09210 222 aa15.19■□□□□ 0.02
LSM1-203ENST00000520755 ERVK-10P10266 1014 aa15.19■□□□□ 0.02
LSM1-203ENST00000520755 PAMP19021 973 aa15.19■□□□□ 0.02
LSM1-203ENST00000520755 HSD17B3P37058 310 aa15.19■□□□□ 0.02
LSM1-203ENST00000520755 CTSKP43235 329 aa15.19■□□□□ 0.02
LSM1-203ENST00000520755 YPEL5P62699 121 aa15.19■□□□□ 0.02
LSM1-203ENST00000520755 PRAMEP78395 509 aa15.19■□□□□ 0.02
LSM1-203ENST00000520755 HLA-BQ31612 363 aa15.19■□□□□ 0.02
LSM1-203ENST00000520755 MAP9Q49MG5 647 aa15.19■□□□□ 0.02
LSM1-203ENST00000520755 ATP13A5Q4VNC0 1218 aa15.19■□□□□ 0.02
LSM1-203ENST00000520755 PRAMEF14Q5SWL7 426 aa15.19■□□□□ 0.02
LSM1-203ENST00000520755 C3orf62Q6ZUJ4 267 aa15.19■□□□□ 0.02
LSM1-203ENST00000520755 HEATR4Q86WZ0 1026 aa15.19■□□□□ 0.02
LSM1-203ENST00000520755 SPATS2Q86XZ4 545 aaKnown RBP15.19■□□□□ 0.02
LSM1-203ENST00000520755 TRAM1L1Q8N609 369 aa15.19■□□□□ 0.02
LSM1-203ENST00000520755 UHMK1Q8TAS1 419 aaKnown RBP15.19■□□□□ 0.02
LSM1-203ENST00000520755 FBF1Q8TES7 1133 aa15.19■□□□□ 0.02
LSM1-203ENST00000520755 HNRNPLLQ8WVV9 542 aaKnown RBP15.19■□□□□ 0.02
LSM1-203ENST00000520755 FUBP1Q96AE4 644 aaKnown RBP15.19■□□□□ 0.02
LSM1-203ENST00000520755 SGSM3Q96HU1 749 aa15.19■□□□□ 0.02
LSM1-203ENST00000520755 EDEM2Q9BV94 578 aa15.19■□□□□ 0.02
LSM1-203ENST00000520755 ZDHHC5Q9C0B5 715 aa15.19■□□□□ 0.02
LSM1-203ENST00000520755 FAM96AQ9H5X1 160 aa15.19■□□□□ 0.02
LSM1-203ENST00000520755 RXFP3Q9NSD7 469 aa15.19■□□□□ 0.02
LSM1-203ENST00000520755 C20orf96Q9NUD7 363 aaPredicted RBP15.19■□□□□ 0.02
LSM1-203ENST00000520755 FAM159BA6NKW6 160 aa15.18■□□□□ 0.02
LSM1-203ENST00000520755 CACNB4O00305 520 aaPredicted RBP15.18■□□□□ 0.02
LSM1-203ENST00000520755 TOR1BO14657 336 aa15.18■□□□□ 0.02
LSM1-203ENST00000520755 SPAG6O75602 509 aa15.18■□□□□ 0.02
LSM1-203ENST00000520755 PYGLP06737 847 aa15.18■□□□□ 0.02
LSM1-203ENST00000520755 HTR1BP28222 390 aa15.18■□□□□ 0.02
LSM1-203ENST00000520755 CDK3Q00526 305 aa15.18■□□□□ 0.02
LSM1-203ENST00000520755 NFATC2Q13469 925 aa15.18■□□□□ 0.02
LSM1-203ENST00000520755 PTK2BQ14289 1009 aa15.18■□□□□ 0.02
LSM1-203ENST00000520755 NFATC4Q14934 902 aa15.18■□□□□ 0.02
LSM1-203ENST00000520755 HSP90AA5PQ58FG0 334 aa15.18■□□□□ 0.02
LSM1-203ENST00000520755 ZDHHC20Q5W0Z9 365 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms