RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 FCRL3Q96P31 734 aaPredicted RBP17.26■□□□□ 0.35
TRAM1-203ENST00000520700 RHOXF2Q9BQY4 288 aa17.26■□□□□ 0.35
TRAM1-203ENST00000520700 WDR83Q9BRX9 315 aaKnown RBP17.26■□□□□ 0.35
TRAM1-203ENST00000520700 RMI1Q9H9A7 625 aa17.26■□□□□ 0.35
TRAM1-203ENST00000520700 MTRF1LQ9UGC7 380 aaKnown RBP17.26■□□□□ 0.35
TRAM1-203ENST00000520700 SNX11Q9Y5W9 270 aa17.26■□□□□ 0.35
TRAM1-203ENST00000520700 ZNF106Q9H2Y7 1883 aaKnown RBP17.25■□□□□ 0.35
TRAM1-203ENST00000520700 IGLV3-16A0A075B6K0 115 aa17.25■□□□□ 0.35
TRAM1-203ENST00000520700 TMEM202A6NGA9 273 aa17.25■□□□□ 0.35
TRAM1-203ENST00000520700 CCL22O00626 93 aa17.25■□□□□ 0.35
TRAM1-203ENST00000520700 VEGFDO43915 354 aa17.25■□□□□ 0.35
TRAM1-203ENST00000520700 GOT2P00505 430 aaKnown RBP17.25■□□□□ 0.35
TRAM1-203ENST00000520700 CSF2P04141 144 aa17.25■□□□□ 0.35
TRAM1-203ENST00000520700 IVLP07476 585 aa17.25■□□□□ 0.35
TRAM1-203ENST00000520700 TNFRSF8P28908 595 aa17.25■□□□□ 0.35
TRAM1-203ENST00000520700 CARSP49589 748 aaKnown RBP17.25■□□□□ 0.35
TRAM1-203ENST00000520700 SPEM2Q0P670 501 aa17.25■□□□□ 0.35
TRAM1-203ENST00000520700 EIF2B5Q13144 721 aaKnown RBP17.25■□□□□ 0.35
TRAM1-203ENST00000520700 TEX35Q5T0J7 233 aa17.25■□□□□ 0.35
TRAM1-203ENST00000520700 LAYNQ6UX15 382 aa17.25■□□□□ 0.35
TRAM1-203ENST00000520700 NXPE1Q8N323 547 aa17.25■□□□□ 0.35
TRAM1-203ENST00000520700 OR6P1Q8NGX9 317 aa17.25■□□□□ 0.35
TRAM1-203ENST00000520700 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.25■□□□□ 0.35
TRAM1-203ENST00000520700 ELF4Q99607 663 aaPredicted RBP17.25■□□□□ 0.35
TRAM1-203ENST00000520700 PLAC1Q9HBJ0 212 aa17.25■□□□□ 0.35
TRAM1-203ENST00000520700 PARD6AQ9NPB6 346 aa17.25■□□□□ 0.35
TRAM1-203ENST00000520700 ZC3H7BQ9UGR2 993 aaKnown RBP17.25■□□□□ 0.35
TRAM1-203ENST00000520700 FNDC3AQ9Y2H6 1198 aaKnown RBP17.25■□□□□ 0.35
TRAM1-203ENST00000520700 ZFHX2Q9C0A1 2572 aaPredicted RBP17.25■□□□□ 0.35
TRAM1-203ENST00000520700 MYLKQ15746 1914 aa17.24■□□□□ 0.35
TRAM1-203ENST00000520700 EP300Q09472 2414 aaPredicted RBP17.24■□□□□ 0.35
TRAM1-203ENST00000520700 CCDC78A2IDD5 438 aa17.24■□□□□ 0.35
TRAM1-203ENST00000520700 CHUKO15111 745 aa17.24■□□□□ 0.35
TRAM1-203ENST00000520700 INPP4BO15327 924 aa17.24■□□□□ 0.35
TRAM1-203ENST00000520700 YKT6O15498 198 aa17.24■□□□□ 0.35
TRAM1-203ENST00000520700 BANF1O75531 89 aa17.24■□□□□ 0.35
TRAM1-203ENST00000520700 VAPBO95292 243 aa17.24■□□□□ 0.35
TRAM1-203ENST00000520700 GSTA2P09210 222 aa17.24■□□□□ 0.35
TRAM1-203ENST00000520700 ZNF883P0CG24 379 aa17.24■□□□□ 0.35
TRAM1-203ENST00000520700 NME1P15531 152 aaKnown RBP17.24■□□□□ 0.35
TRAM1-203ENST00000520700 ENGP17813 658 aa17.24■□□□□ 0.35
TRAM1-203ENST00000520700 CA5AP35218 305 aa17.24■□□□□ 0.35
TRAM1-203ENST00000520700 PPARGP37231 505 aaPredicted RBP17.24■□□□□ 0.35
TRAM1-203ENST00000520700 BLKP51451 505 aa17.24■□□□□ 0.35
TRAM1-203ENST00000520700 SRP54P61011 504 aaKnown RBP17.24■□□□□ 0.35
TRAM1-203ENST00000520700 ITIH4Q14624 930 aa17.24■□□□□ 0.35
TRAM1-203ENST00000520700 CRYMQ14894 314 aa17.24■□□□□ 0.35
TRAM1-203ENST00000520700 LONRF1Q17RB8 773 aa17.24■□□□□ 0.35
TRAM1-203ENST00000520700 HLA-BQ31612 363 aa17.24■□□□□ 0.35
TRAM1-203ENST00000520700 ZRANB3Q5FWF4 1079 aa17.24■□□□□ 0.35
TRAM1-203ENST00000520700 AARS2Q5JTZ9 985 aaKnown RBP17.24■□□□□ 0.35
TRAM1-203ENST00000520700 GPRC6AQ5T6X5 926 aa17.24■□□□□ 0.35
TRAM1-203ENST00000520700 ENPP7Q6UWV6 458 aa17.24■□□□□ 0.35
TRAM1-203ENST00000520700 CES3Q6UWW8 571 aa17.24■□□□□ 0.35
TRAM1-203ENST00000520700 ADGRG6Q86SQ4 1221 aa17.24■□□□□ 0.35
TRAM1-203ENST00000520700 PIANPQ8IYJ0 282 aa17.24■□□□□ 0.35
TRAM1-203ENST00000520700 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.24■□□□□ 0.35
TRAM1-203ENST00000520700 FBXO36Q8NEA4 188 aa17.24■□□□□ 0.35
TRAM1-203ENST00000520700 PYROXD1Q8WU10 500 aa17.24■□□□□ 0.35
TRAM1-203ENST00000520700 IFT81Q8WYA0 676 aa17.24■□□□□ 0.35
TRAM1-203ENST00000520700 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.24■□□□□ 0.35
TRAM1-203ENST00000520700 ZNF669Q96BR6 464 aaPredicted RBP17.24■□□□□ 0.35
TRAM1-203ENST00000520700 TCF12Q99081 682 aa17.24■□□□□ 0.35
TRAM1-203ENST00000520700 TTC1Q99614 292 aa17.24■□□□□ 0.35
TRAM1-203ENST00000520700 SAYSD1Q9NPB0 183 aa17.24■□□□□ 0.35
TRAM1-203ENST00000520700 ZDHHC3Q9NYG2 299 aa17.24■□□□□ 0.35
TRAM1-203ENST00000520700 CRLS1Q9UJA2 301 aa17.24■□□□□ 0.35
TRAM1-203ENST00000520700 OAS3Q9Y6K5 1087 aaKnown RBP17.24■□□□□ 0.35
TRAM1-203ENST00000520700 RIF1Q5UIP0 2472 aaKnown RBP17.24■□□□□ 0.35
TRAM1-203ENST00000520700 PCDH15Q96QU1 1955 aa17.24■□□□□ 0.35
TRAM1-203ENST00000520700 A0A1B0GTQ1 180 aa17.23■□□□□ 0.35
TRAM1-203ENST00000520700 LNP1A1A4G5 178 aa17.23■□□□□ 0.35
TRAM1-203ENST00000520700 CD3EAPO15446 510 aaKnown RBP17.23■□□□□ 0.35
TRAM1-203ENST00000520700 NUAK1O60285 661 aa17.23■□□□□ 0.35
TRAM1-203ENST00000520700 RASGRP1O95267 797 aa17.23■□□□□ 0.35
TRAM1-203ENST00000520700 CER1O95813 267 aa17.23■□□□□ 0.35
TRAM1-203ENST00000520700 FUCA1P04066 466 aa17.23■□□□□ 0.35
TRAM1-203ENST00000520700 ACRV1P26436 265 aa17.23■□□□□ 0.35
TRAM1-203ENST00000520700 ARRB1P49407 418 aaPredicted RBP17.23■□□□□ 0.35
TRAM1-203ENST00000520700 HK3P52790 923 aa17.23■□□□□ 0.35
TRAM1-203ENST00000520700 PPARDQ03181 441 aa17.23■□□□□ 0.35
TRAM1-203ENST00000520700 TMEM115Q12893 351 aaPredicted RBP17.23■□□□□ 0.35
TRAM1-203ENST00000520700 CCDC6Q16204 474 aa17.23■□□□□ 0.35
TRAM1-203ENST00000520700 ALG11Q2TAA5 492 aa17.23■□□□□ 0.35
TRAM1-203ENST00000520700 FASTKD1Q53R41 847 aaKnown RBP17.23■□□□□ 0.35
TRAM1-203ENST00000520700 MRNIPQ6NTE8 343 aa17.23■□□□□ 0.35
TRAM1-203ENST00000520700 PSAPL1Q6NUJ1 521 aa17.23■□□□□ 0.35
TRAM1-203ENST00000520700 NEPROQ6NW34 567 aa17.23■□□□□ 0.35
TRAM1-203ENST00000520700 ZNF449Q6P9G9 518 aa17.23■□□□□ 0.35
TRAM1-203ENST00000520700 UNC5AQ6ZN44 842 aa17.23■□□□□ 0.35
TRAM1-203ENST00000520700 SERPINA9Q86WD7 417 aa17.23■□□□□ 0.35
TRAM1-203ENST00000520700 ZBED8Q8IZ13 594 aa17.23■□□□□ 0.35
TRAM1-203ENST00000520700 SDR16C5Q8N3Y7 309 aa17.23■□□□□ 0.35
TRAM1-203ENST00000520700 DCLK2Q8N568 766 aa17.23■□□□□ 0.35
TRAM1-203ENST00000520700 OR1E3Q8WZA6 343 aa17.23■□□□□ 0.35
TRAM1-203ENST00000520700 ZNF514Q96K75 400 aaPredicted RBP17.23■□□□□ 0.35
TRAM1-203ENST00000520700 FMO2Q99518 471 aa17.23■□□□□ 0.35
TRAM1-203ENST00000520700 COPS8Q99627 209 aa17.23■□□□□ 0.35
TRAM1-203ENST00000520700 TRIM56Q9BRZ2 755 aaKnown RBP17.23■□□□□ 0.35
TRAM1-203ENST00000520700 ZCCHC2Q9C0B9 1178 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms