RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 C16orf96A6NNT2 1141 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 PLK4O00444 970 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 CCDC166P0CW27 439 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 KITP10721 976 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 PMLP29590 882 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 POLR2LP62875 67 aaKnown RBP14.39□□□□□ -0.11
CLN8-204ENST00000519254 ENPP2Q13822 863 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 CSHL1Q14406 222 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 KIAA1211LQ6NV74 962 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 ZNF852Q6ZMS4 543 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 PARS2Q7L3T8 475 aaKnown RBP14.39□□□□□ -0.11
CLN8-204ENST00000519254 DSG4Q86SJ6 1040 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 TTC7BQ86TV6 843 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 PIM3Q86V86 326 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 ANKRD49Q8WVL7 239 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 SCG3Q8WXD2 468 aaKnown RBP14.39□□□□□ -0.11
CLN8-204ENST00000519254 LPGAT1Q92604 370 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 ERP27Q96DN0 273 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 TCF12Q99081 682 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 MRPL57Q9BQC6 102 aaKnown RBP14.39□□□□□ -0.11
CLN8-204ENST00000519254 AARSD1Q9BTE6 412 aaKnown RBP14.39□□□□□ -0.11
CLN8-204ENST00000519254 GATA5Q9BWX5 397 aaPredicted RBP14.39□□□□□ -0.11
CLN8-204ENST00000519254 GPAMQ9HCL2 828 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 KCNK4Q9NYG8 393 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 XPR1Q9UBH6 696 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 MARCOQ9UEW3 520 aaPredicted RBP14.39□□□□□ -0.11
CLN8-204ENST00000519254 F5P12259 2224 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 A0A1W2PQ67 120 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 UPK3BL1B0FP48 263 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 UPK3BL2E5RIL1 263 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 C1QTNF3-AMACRE9PGA6 284 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 MAN2B1O00754 1011 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 DLX3O60479 287 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 ADAM23O75077 832 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 LTA4HP09960 611 aaKnown RBP14.39□□□□□ -0.11
CLN8-204ENST00000519254 CHRM1P11229 460 aaPredicted RBP14.39□□□□□ -0.11
CLN8-204ENST00000519254 HOXB2P14652 356 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 MC4RP32245 332 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 HMGCLP35914 325 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 SUOXP51687 545 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 XIAPP98170 497 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 CCINQ13939 588 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 STARD3Q14849 445 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 SETDB1Q15047 1291 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 CDKN3Q16667 212 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 PSAPL1Q6NUJ1 521 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 TRMT11Q7Z4G4 463 aaKnown RBP14.39□□□□□ -0.11
CLN8-204ENST00000519254 CCDC91Q7Z6B0 441 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 MTDHQ86UE4 582 aaKnown RBP14.39□□□□□ -0.11
CLN8-204ENST00000519254 TSPAN33Q86UF1 283 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 TMIEQ8NEW7 156 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 ARRDC3Q96B67 414 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 MRPL46Q9H2W6 279 aaKnown RBP14.39□□□□□ -0.11
CLN8-204ENST00000519254 FAM96AQ9H5X1 160 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 DYRK4Q9NR20 520 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 HEY2Q9UBP5 337 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 DNAJC16Q9Y2G8 782 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 C19orf67A6NJJ6 358 aa14.38□□□□□ -0.11
CLN8-204ENST00000519254 GOLGA8CPA6NN73 597 aa14.38□□□□□ -0.11
CLN8-204ENST00000519254 TMEM114B3SHH9 223 aa14.38□□□□□ -0.11
CLN8-204ENST00000519254 H2AFYO75367 372 aaKnown RBP14.38□□□□□ -0.11
CLN8-204ENST00000519254 CLDN7O95471 211 aa14.38□□□□□ -0.11
CLN8-204ENST00000519254 TIMP2P16035 220 aa14.38□□□□□ -0.11
CLN8-204ENST00000519254 SLC26A3P40879 764 aa14.38□□□□□ -0.11
CLN8-204ENST00000519254 MRPS21P82921 87 aaKnown RBP14.38□□□□□ -0.11
CLN8-204ENST00000519254 CAMK2GQ13555 558 aaPredicted RBP14.38□□□□□ -0.11
CLN8-204ENST00000519254 FAM83EQ2M2I3 478 aa14.38□□□□□ -0.11
CLN8-204ENST00000519254 TECRLQ5HYJ1 363 aa14.38□□□□□ -0.11
CLN8-204ENST00000519254 AGAP9Q5VTM2 703 aa14.38□□□□□ -0.11
CLN8-204ENST00000519254 LIPMQ5VYY2 423 aa14.38□□□□□ -0.11
CLN8-204ENST00000519254 PIWIL2Q8TC59 973 aaKnown RBP14.38□□□□□ -0.11
CLN8-204ENST00000519254 MOCOSQ96EN8 888 aa14.38□□□□□ -0.11
CLN8-204ENST00000519254 SCRN2Q96FV2 425 aa14.38□□□□□ -0.11
CLN8-204ENST00000519254 PPP1R16AQ96I34 528 aa14.38□□□□□ -0.11
CLN8-204ENST00000519254 GABRG3Q99928 467 aa14.38□□□□□ -0.11
CLN8-204ENST00000519254 ZMYND15Q9H091 742 aa14.38□□□□□ -0.11
CLN8-204ENST00000519254 ZFYVE1Q9HBF4 777 aa14.38□□□□□ -0.11
CLN8-204ENST00000519254 PCDH12Q9NPG4 1184 aa14.38□□□□□ -0.11
CLN8-204ENST00000519254 PNPOQ9NVS9 261 aa14.38□□□□□ -0.11
CLN8-204ENST00000519254 B4GALT6Q9UBX8 382 aa14.38□□□□□ -0.11
CLN8-204ENST00000519254 MED16Q9Y2X0 877 aa14.38□□□□□ -0.11
CLN8-204ENST00000519254 PKP3Q9Y446 797 aa14.38□□□□□ -0.11
CLN8-204ENST00000519254 TSPAN11A1L157 253 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 KRBA1A5PL33 1030 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 RNASEH1O60930 286 aaKnown RBP14.37□□□□□ -0.11
CLN8-204ENST00000519254 NDUFS3O75489 264 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 COL9A1P20849 921 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 ITGB7P26010 798 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 KPNA2P52292 529 aaKnown RBP14.37□□□□□ -0.11
CLN8-204ENST00000519254 AQP5P55064 265 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 NCALDP61601 193 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 SATB1Q01826 763 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 UBXN2BQ14CS0 331 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 FBXO43Q4G163 708 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 SETMARQ53H47 684 aaPredicted RBP14.37□□□□□ -0.11
CLN8-204ENST00000519254 LRRC66Q68CR7 880 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 FBXL19Q6PCT2 694 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 CRTC1Q6UUV9 634 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 Q6ZS52 159 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 SIX5Q8N196 739 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms