RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 PPM1HQ9ULR3 514 aa12.75□□□□□ -0.37
PVT1-203ENST00000513868 DNAJC16Q9Y2G8 782 aa12.75□□□□□ -0.37
PVT1-203ENST00000513868 PRSS21Q9Y6M0 314 aa12.75□□□□□ -0.37
PVT1-203ENST00000513868 TRIOBPQ9H2D6 2365 aa12.75□□□□□ -0.37
PVT1-203ENST00000513868 A0A0G2JND7 137 aa12.74□□□□□ -0.37
PVT1-203ENST00000513868 TBC1D3BA6NDS4 549 aa12.74□□□□□ -0.37
PVT1-203ENST00000513868 IQCF5A8MTL0 148 aa12.74□□□□□ -0.37
PVT1-203ENST00000513868 SPINT1O43278 529 aa12.74□□□□□ -0.37
PVT1-203ENST00000513868 VPS26AO75436 327 aa12.74□□□□□ -0.37
PVT1-203ENST00000513868 KITP10721 976 aa12.74□□□□□ -0.37
PVT1-203ENST00000513868 CYP2A6P11509 494 aaPredicted RBP12.74□□□□□ -0.37
PVT1-203ENST00000513868 ATP5F1P24539 256 aaPredicted RBP12.74□□□□□ -0.37
PVT1-203ENST00000513868 IL12RB1P42701 662 aa12.74□□□□□ -0.37
PVT1-203ENST00000513868 CLCN7P51798 805 aa12.74□□□□□ -0.37
PVT1-203ENST00000513868 NAGLUP54802 743 aa12.74□□□□□ -0.37
PVT1-203ENST00000513868 DNAJB13P59910 316 aa12.74□□□□□ -0.37
PVT1-203ENST00000513868 OR4D1Q15615 310 aa12.74□□□□□ -0.37
PVT1-203ENST00000513868 ITPRIPL2Q3MIP1 535 aa12.74□□□□□ -0.37
PVT1-203ENST00000513868 ATP13A5Q4VNC0 1218 aa12.74□□□□□ -0.37
PVT1-203ENST00000513868 LYPLAL1Q5VWZ2 237 aa12.74□□□□□ -0.37
PVT1-203ENST00000513868 EP400NLQ6ZTU2 488 aa12.74□□□□□ -0.37
PVT1-203ENST00000513868 CCDC121Q6ZUS5 278 aa12.74□□□□□ -0.37
PVT1-203ENST00000513868 DPPA4Q7L190 304 aa12.74□□□□□ -0.37
PVT1-203ENST00000513868 TTC7BQ86TV6 843 aa12.74□□□□□ -0.37
PVT1-203ENST00000513868 LSMEM2Q8N112 164 aa12.74□□□□□ -0.37
PVT1-203ENST00000513868 NXPE1Q8N323 547 aa12.74□□□□□ -0.37
PVT1-203ENST00000513868 SIDT2Q8NBJ9 832 aaKnown RBP12.74□□□□□ -0.37
PVT1-203ENST00000513868 SMRP1Q8NCR6 262 aa12.74□□□□□ -0.37
PVT1-203ENST00000513868 TMIEQ8NEW7 156 aa12.74□□□□□ -0.37
PVT1-203ENST00000513868 PIWIL2Q8TC59 973 aaKnown RBP12.74□□□□□ -0.37
PVT1-203ENST00000513868 NAT14Q8WUY8 206 aa12.74□□□□□ -0.37
PVT1-203ENST00000513868 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.74□□□□□ -0.379e-6■■□□□ 12.4
PVT1-203ENST00000513868 ACOX2Q99424 681 aa12.74□□□□□ -0.37
PVT1-203ENST00000513868 DERL2Q9GZP9 239 aa12.74□□□□□ -0.37
PVT1-203ENST00000513868 DRC3Q9H069 523 aa12.74□□□□□ -0.37
PVT1-203ENST00000513868 SYTL2Q9HCH5 934 aa12.74□□□□□ -0.37
PVT1-203ENST00000513868 PNPOQ9NVS9 261 aa12.74□□□□□ -0.37
PVT1-203ENST00000513868 KCNK4Q9NYG8 393 aa12.74□□□□□ -0.37
PVT1-203ENST00000513868 THAP10Q9P2Z0 257 aaPredicted RBP12.74□□□□□ -0.37
PVT1-203ENST00000513868 PCDHB1Q9Y5F3 818 aa12.74□□□□□ -0.37
PVT1-203ENST00000513868 GOLGA8CPA6NN73 597 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 A8MT66 165 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 ANHXE9PGG2 379 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 ZNF195O14628 629 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 UBOX5O94941 541 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 PRNPP04156 253 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 PYGLP06737 847 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 ZNF7P17097 686 aaPredicted RBP12.73□□□□□ -0.37
PVT1-203ENST00000513868 GM2AP17900 193 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 MMP12P39900 470 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 CCR10P46092 362 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 ARFIP2P53365 341 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 CCDC15Q0P6D6 951 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 ARHGEF7Q14155 803 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 ZDHHC20Q5W0Z9 365 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 MAVSQ7Z434 540 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 RBFAQ8N0V3 343 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 CLDN19Q8N6F1 224 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 RHEBL1Q8TAI7 183 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 SUSD6Q92537 303 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 ARRDC3Q96B67 414 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 ATOH8Q96SQ7 321 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 TFB2MQ9H5Q4 396 aaKnown RBP12.73□□□□□ -0.37
PVT1-203ENST00000513868 ZDHHC4Q9NPG8 344 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 EPS15L1Q9UBC2 864 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 RRP15Q9Y3B9 282 aaKnown RBP12.73□□□□□ -0.37
PVT1-203ENST00000513868 F5P12259 2224 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 KPNA3O00505 521 aaPredicted RBP12.73□□□□□ -0.37
PVT1-203ENST00000513868 HGSO14964 777 aaPredicted RBP12.73□□□□□ -0.37
PVT1-203ENST00000513868 IPO13O94829 963 aaKnown RBP12.73□□□□□ -0.37
PVT1-203ENST00000513868 KIAA0754O94854 1291 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 CHRNGP07510 517 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 MTHFD2P13995 350 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 ALOX15P16050 662 aaPredicted RBP12.73□□□□□ -0.37
PVT1-203ENST00000513868 CHRM3P20309 590 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 PPARGP37231 505 aaPredicted RBP12.73□□□□□ -0.37
PVT1-203ENST00000513868 GRIA2P42262 883 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 SKIV2L2P42285 1042 aaKnown RBP12.73□□□□□ -0.37
PVT1-203ENST00000513868 SOX9P48436 509 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 B4GALNT1Q00973 533 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 HTR4Q13639 388 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 RCN2Q14257 317 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 ELAVL3Q14576 367 aaKnown RBP12.73□□□□□ -0.37
PVT1-203ENST00000513868 EGFLAMQ63HQ2 1017 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 SERPINA13PQ6UXR4 307 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 TRIM67Q6ZTA4 783 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 Q6ZVL8 140 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 TECPR1Q7Z6L1 1165 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 ZNF781Q8N8C0 355 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 PIP4K2CQ8TBX8 421 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 LKAAEAR1Q8TD35 194 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 SREK1Q8WXA9 508 aaKnown RBP12.73□□□□□ -0.37
PVT1-203ENST00000513868 OR8D1Q8WZ84 308 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 EZH1Q92800 747 aaPredicted RBP12.73□□□□□ -0.37
PVT1-203ENST00000513868 TMEM237Q96Q45 408 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 CLPBQ9H078 707 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 MYLK2Q9H1R3 596 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 PKD2L2Q9NZM6 624 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 NFKBIL1Q9UBC1 381 aaPredicted RBP12.73□□□□□ -0.37
PVT1-203ENST00000513868 CD84Q9UIB8 345 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms