RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 CD82P27701 267 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 HNRNPH3P31942 346 aaKnown RBP6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 CASP14P31944 242 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 GJC1P36383 396 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 TSPAN7P41732 249 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 SPINT3P49223 89 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 RPL26P61254 145 aaKnown RBP6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 ITKQ08881 620 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 LRP8Q14114 963 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 IFI16Q16666 785 aaKnown RBP6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 KHDC1Q4VXA5 237 aaKnown RBP6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 TDRD12Q587J7 1177 aaKnown RBP6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 CCDC122Q5T0U0 273 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 ZNF648Q5T619 568 aaPredicted RBP6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 ANKS6Q68DC2 871 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 TMEM71Q6P5X7 295 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 IYDQ6PHW0 289 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 TIPARPQ7Z3E1 657 aaKnown RBP6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 GALNT13Q8IUC8 556 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 RAVER1Q8IY67 606 aaKnown RBP6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 BBS5Q8N3I7 341 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 PLD5Q8N7P1 536 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 KCTD6Q8NC69 237 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 AGBL5Q8NDL9 886 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 GPR26Q8NDV2 337 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 LPCAT1Q8NF37 534 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 EXD1Q8NHP7 514 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 ZNF564Q8TBZ8 553 aaPredicted RBP6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 NSMCE1Q8WV22 266 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 TADA1Q96BN2 335 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 ZNF670Q9BS34 389 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 DDA1Q9BW61 102 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 TRIM4Q9C037 500 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 PCDH9Q9HC56 1237 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 APMAPQ9HDC9 416 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 ARFGAP3Q9NP61 516 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 ATP13A2Q9NQ11 1180 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 SLC39A1Q9NY26 324 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 KCNK4Q9NYG8 393 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 OGFRQ9NZT2 677 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 SEPT10Q9P0V9 454 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 SCHIP1Q9P0W5 487 aaPredicted RBP6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 SLC23A2Q9UGH3 650 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 AMACRQ9UHK6 382 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 ZNHIT2Q9UHR6 403 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 PILRAQ9UKJ1 303 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 TMPRSS11EQ9UL52 423 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 RPL26L1Q9UNX3 145 aaKnown RBP6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 KCNK6Q9Y257 313 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 TEX15Q9BXT5 2789 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 NBPF19A0A087WUL8 3843 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 SPTAN1Q13813 2472 aaKnown RBP6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 C1orf232A0A0U1RR37 186 aa6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 LOC101059948A0A1B0GTJ6 334 aa6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 SYCE3A1L190 88 aa6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 EFCAB7A8K855 629 aa6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 A8MU76 341 aa6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 NKX2-8O15522 239 aa6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 DUX1O43812 170 aa6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 NUAK1O60285 661 aa6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 PIRTP0C851 137 aa6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 ACP5P13686 325 aa6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 ZNF8P17098 575 aaPredicted RBP6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 CES1P23141 567 aa6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 KDELR1P24390 212 aa6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 NFKBIAP25963 317 aa6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 CSTF2P33240 577 aaKnown RBP eCLIP6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 CD86P42081 329 aa6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 SSR1P43307 286 aaKnown RBP6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 EPHB1P54762 984 aa6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 UBASH3AP57075 661 aa6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 UBE2IP63279 158 aaKnown RBP6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 GPLD1P80108 840 aa6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 IFI35P80217 286 aaPredicted RBP6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 MC2RQ01718 297 aa6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 PPIDQ08752 370 aaKnown RBP6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 NFATC2Q13469 925 aa6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 GALNT3Q14435 633 aa6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 PDK2Q15119 407 aa6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 NFKBIBQ15653 356 aa6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 HADHQ16836 314 aaKnown RBP6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 TMEM164Q5U3C3 297 aa6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 SLC9A4Q6AI14 798 aa6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 TIGD7Q6NT04 549 aaPredicted RBP6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 WDR74Q6RFH5 385 aaPredicted RBP6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 XKR5Q6UX68 686 aa6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 NPNTQ6UXI9 565 aa6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 B4GALNT4Q76KP1 1039 aa6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 CHST15Q7LFX5 561 aaPredicted RBP6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 LYSMD3Q7Z3D4 306 aa6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 PRICKLE2Q7Z3G6 844 aa6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 ZNF547Q8IVP9 402 aa6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 CCDC13Q8IYE1 715 aa6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 HDAC11Q96DB2 347 aa6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 RTP4Q96DX8 246 aa6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 IMP4Q96G21 291 aaKnown RBP6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 OLFM3Q96PB7 478 aa6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 RNF157Q96PX1 679 aa6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 PLEKHG4BQ96PX9 1271 aa6.36□□□□□ -1.39
HMGN1P16-201ENST00000508308 CTRCQ99895 268 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms